FFCP PHASE1:Mm9::chr17:28660263..28660272,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=142|UniProt=Q3TS03|association_with_transcript=25bp_to_ENSMUST00000095448_5end|description=CAGE_peak_2_at_ENSMUST00000095448_5end|id=chr17:28660263..28660272,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,3.94e-18,9;CL:0002494,5.46e-07,3;CL:0000737,5.46e-07,3;CL:0000746,5.46e-07,3;CL:0000513,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6|ontology_enrichment_uberon=UBERON:0002370!1.20e-08!23;UBERON:0000974!1.20e-08!23;UBERON:0004807!1.20e-08!23;UBERON:0005058!1.20e-08!23;UBERON:0003351!1.20e-08!23;UBERON:0009113!1.20e-08!23;UBERON:0003295!1.20e-08!23;UBERON:0009722!1.20e-08!23;UBERON:0005562!1.20e-08!23;UBERON:0007690!1.20e-08!23;UBERON:0004177!2.49e-08!29;UBERON:0006562!3.98e-08!24;UBERON:0003408!3.98e-08!24;UBERON:0001557!3.98e-08!24;UBERON:0001042!3.98e-08!24;UBERON:0008814!3.98e-08!24;UBERON:0009145!3.98e-08!24;UBERON:0000490!2.99e-07!66;UBERON:0002390!4.25e-07!45;UBERON:0003061!4.25e-07!45;UBERON:0003929!5.84e-07!55;UBERON:0000072!8.26e-07!27;UBERON:0002368!8.93e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.94e-18,9;UBERON:0002036,3.94e-18,9;UBERON:0002385,3.94e-18,9;UBERON:0000486,3.94e-18,9;UBERON:0007503,3.94e-18,9;UBERON:0001015,3.94e-18,9;UBERON:0002329,3.94e-18,9;UBERON:0003082,3.94e-18,9;UBERON:0003059,3.94e-18,9;UBERON:0007282,3.94e-18,9;UBERON:0004290,3.94e-18,9;UBERON:0009618,3.94e-18,9;UBERON:0000383,2.07e-16,10;UBERON:0007524,5.33e-15,11;UBERON:0003077,5.33e-15,11;UBERON:0007285,5.33e-15,11|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.516493293766305,0.563154888606667,0.70219357896598,0,0,0.513602189793617,0.262261207256992,0,0.202475267389826,0.699561878128147,0.630924330716475,0.411343300817216,0,0,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,1.67412652294763,0,3.14114246384279,0.588231488031014,12.294818729252,0.971020706062307,0,0,0,0.782391344348039,0.218025156380447,0,0,1.1198913730029,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.452167921657868,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0.412773735926445,0.370389054739423,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.716106782669926,0.39736270956253,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p2@ENSMUST00000095448}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|UniProt=Q3TS03 | |||
|association_with_transcript=25bp_to_ENSMUST00000095448_5end | |||
|description=CAGE_peak_2_at_ENSMUST00000095448_5end | |||
|id=chr17:28660263..28660272,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.94e-18,9;CL:0002494,5.46e-07,3;CL:0000737,5.46e-07,3;CL:0000746,5.46e-07,3;CL:0000513,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.20e-08!23;UBERON:0000974!1.20e-08!23;UBERON:0004807!1.20e-08!23;UBERON:0005058!1.20e-08!23;UBERON:0003351!1.20e-08!23;UBERON:0009113!1.20e-08!23;UBERON:0003295!1.20e-08!23;UBERON:0009722!1.20e-08!23;UBERON:0005562!1.20e-08!23;UBERON:0007690!1.20e-08!23;UBERON:0004177!2.49e-08!29;UBERON:0006562!3.98e-08!24;UBERON:0003408!3.98e-08!24;UBERON:0001557!3.98e-08!24;UBERON:0001042!3.98e-08!24;UBERON:0008814!3.98e-08!24;UBERON:0009145!3.98e-08!24;UBERON:0000490!2.99e-07!66;UBERON:0002390!4.25e-07!45;UBERON:0003061!4.25e-07!45;UBERON:0003929!5.84e-07!55;UBERON:0000072!8.26e-07!27;UBERON:0002368!8.93e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.94e-18,9;UBERON:0002036,3.94e-18,9;UBERON:0002385,3.94e-18,9;UBERON:0000486,3.94e-18,9;UBERON:0007503,3.94e-18,9;UBERON:0001015,3.94e-18,9;UBERON:0002329,3.94e-18,9;UBERON:0003082,3.94e-18,9;UBERON:0003059,3.94e-18,9;UBERON:0007282,3.94e-18,9;UBERON:0004290,3.94e-18,9;UBERON:0009618,3.94e-18,9;UBERON:0000383,2.07e-16,10;UBERON:0007524,5.33e-15,11;UBERON:0003077,5.33e-15,11;UBERON:0007285,5.33e-15,11 | |||
|phase1_expression=0,0,0,0.30246421130683,0.500895729946347,0,0.233612640595526,0.516493293766305,0.563154888606667,0.70219357896598,0,0,0.513602189793617,0.262261207256992,0,0.202475267389826,0.699561878128147,0.630924330716475,0.411343300817216,0,0,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0,0,0,0,0,0.204169356262369,1.67412652294763,0,3.14114246384279,0.588231488031014,12.294818729252,0.971020706062307,0,0,0,0.782391344348039,0.218025156380447,0,0,1.1198913730029,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679971333707751,0,0,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0.452167921657868,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0.178368817602071,0.329098041204242,0.913394847343798,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0.412773735926445,0.370389054739423,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.716106782669926,0.39736270956253,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.100826185136841,0,0,0.116876902181569,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p2@ENSMUST00000095448 | |||
}} |
Revision as of 13:57, 13 September 2013
Short description: | p2@ENSMUST00000095448 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000095448_5end |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | 25bp_to_ENSMUST00000095448_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.94e-18 | 9 |
cardiocyte | 5.46e-07 | 3 |
striated muscle cell | 5.46e-07 | 3 |
cardiac muscle cell | 5.46e-07 | 3 |
cardiac muscle myoblast | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.94e-18 | 9 |
striated muscle tissue | 3.94e-18 | 9 |
muscle tissue | 3.94e-18 | 9 |
multilaminar epithelium | 3.94e-18 | 9 |
epithelial vesicle | 3.94e-18 | 9 |
musculature | 3.94e-18 | 9 |
somite | 3.94e-18 | 9 |
myotome | 3.94e-18 | 9 |
presomitic mesoderm | 3.94e-18 | 9 |
presumptive segmental plate | 3.94e-18 | 9 |
dermomyotome | 3.94e-18 | 9 |
trunk paraxial mesoderm | 3.94e-18 | 9 |
musculature of body | 2.07e-16 | 10 |
dense mesenchyme tissue | 5.33e-15 | 11 |
paraxial mesoderm | 5.33e-15 | 11 |
presumptive paraxial mesoderm | 5.33e-15 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.99e-24 | 3 |
muscle cancer | 2.99e-24 | 3 |
organ system cancer | 1.08e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.