FFCP PHASE1:Hg19::chr5:147211226..147211242,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6690|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11244|TSSclassifier=S|UniProt=P00995|association_with_transcript=17bp_to_NM_003122,uc003los.2_5end|coexpression_cluster_id=C27|description=CAGE_peak_3_at_SPINK1_5end|id=chr5:147211226..147211242,-|ontology_enrichment_celltype=CL:0000181!2.12e-11!12;CL:0000417!2.12e-11!12;CL:0000668!2.12e-11!12;CL:0000414!2.12e-11!12;CL:0000412!2.12e-11!12;CL:0000182!2.12e-11!12|ontology_enrichment_celltype_v019=CL:0002178;2.85e-07;3!CL:0000182;4.04e-07;12!CL:0000632;4.59e-07;3|ontology_enrichment_celltype_v019_2=CL:0002178,3.04e-07,3;CL:0000182,4.07e-07,12;CL:0000632,5.05e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!5.25e-18!35;UBERON:0004921!7.86e-18!129;UBERON:0004185!7.86e-18!129;UBERON:0009854!6.65e-16!23;UBERON:0001007!1.75e-14!155;UBERON:0001555!1.75e-14!155;UBERON:0007026!1.75e-14!155;UBERON:0009497!1.86e-14!25;UBERON:0000015!1.86e-14!25;UBERON:0002423!1.86e-14!25;UBERON:0006235!1.86e-14!25;UBERON:0004161!1.86e-14!25;UBERON:0008835!5.74e-14!22;UBERON:0003894!5.74e-14!22;UBERON:0005057!6.89e-14!26;UBERON:0002107!7.60e-14!19;UBERON:0006925!7.60e-14!19;UBERON:0008836!7.60e-14!19;UBERON:0009856!9.62e-14!26;UBERON:0000160!2.15e-13!27;UBERON:0000059!1.08e-12!11;UBERON:0004119!1.49e-12!169;UBERON:0000925!1.49e-12!169;UBERON:0006595!1.49e-12!169;UBERON:0007499!5.37e-12!25;UBERON:0003929!8.10e-12!54;UBERON:0000077!1.43e-10!130;UBERON:0004907!1.01e-09!5;UBERON:0001046!6.39e-09!19;UBERON:0001155!1.57e-08!9;UBERON:0002368!4.95e-08!35;UBERON:0002365!1.13e-07!31;UBERON:0002330!1.13e-07!31;UBERON:0005172!2.34e-07!55;UBERON:0005173!2.34e-07!55;UBERON:0001052!3.28e-07!4;UBERON:0000949!5.17e-07!45|ontology_enrichment_uberon_v019=UBERON:0005409;4.32e-34;22!UBERON:0000160;3.10e-26;17!UBERON:0004921;2.64e-20;33!UBERON:0000059;9.03e-16;11!UBERON:0001155;8.37e-14;9!UBERON:0002107;3.98e-12;19!UBERON:0006925;3.98e-12;19!UBERON:0001007;7.91e-12;81!UBERON:0002423;1.16e-11;25!UBERON:0002108;6.12e-10;4!UBERON:0000945;1.99e-09;5!UBERON:0010039;1.99e-09;5!UBERON:0004907;2.17e-09;5!UBERON:0002368;1.53e-07;33!UBERON:0001555;2.30e-07;54!UBERON:0002365;2.47e-07;31!UBERON:0002330;2.47e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.90e-30,25;UBERON:0000160,2.98e-26,17;UBERON:0004921,1.81e-22,118;UBERON:0001007,7.28e-19,145;UBERON:0001555,7.28e-19,145;UBERON:0007026,7.28e-19,145;UBERON:0004119,1.51e-16,160;UBERON:0000925,1.51e-16,160;UBERON:0006595,1.51e-16,160;UBERON:0000059,8.68e-16,11;UBERON:0001155,8.37e-14,9;UBERON:0003929,6.28e-13,54;UBERON:0009854,1.07e-12,23;UBERON:0002107,4.23e-12,19;UBERON:0006925,4.23e-12,19;UBERON:0008836,4.23e-12,19;UBERON:0001046,6.98e-12,19;UBERON:0009497,1.22e-11,25;UBERON:0000015,1.22e-11,25;UBERON:0002423,1.22e-11,25;UBERON:0006235,1.22e-11,25;UBERON:0004161,1.22e-11,25;UBERON:0009856,4.36e-11,26;UBERON:0011216,4.90e-11,223;UBERON:0008835,2.55e-10,22;UBERON:0003894,2.55e-10,22;UBERON:0002108,6.12e-10,4;UBERON:0004907,2.11e-09,5;UBERON:0007499,5.72e-09,25;UBERON:0002368,6.33e-08,35;UBERON:0005911,1.32e-07,82;UBERON:0000949,1.59e-07,45;UBERON:0005172,2.29e-07,54;UBERON:0005173,2.29e-07,54;UBERON:0002365,4.73e-07,31;UBERON:0002330,4.73e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,438.572420483535,761.69109292516,458.45296758477,0,57.8045661152634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.2560447903243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,4.42054264849836,7.55798243562828,0,0,0,0,0.179021174675609,0,10.2589141862411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71314828557017,38.8720946443337,0,19.9052386215701,14.6839557075543,26.8853263770795,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,4909.80325725478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,9.60538476327087,0,6.77224960624298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.551482276150566,0.247247575143499,0.539228350833479,19.587068821435,0,0,0,0,0,0,0,0,0,0,6.93490224232944,3.09482069996489,0,0,0,0,0,0,0,0,0,0,0,0,0,133.655637114411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9073.3776704162,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70958557103084,0,0.280272163313789,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,1.3741032706134,0,0,0,0,5.34282092365053,0,0,0,0,0,0,22.4576800094119,45.6789481453271,0,2.45148321753905,0,0,0,1.6906229103336,0,0,0.966868319603658,0,0,0,0,320.617674440221,0,0,0,0,0,3283.66959907909,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0.803892390468535,0,0,0.426467963801962,0,0,5.27635071514792,0,0,0,0,0,0,0.358611026963382,1.66330178273007,0,0,0,0,30.5033225124491,0,0,7.98908129022615,0,0|short_description=p3@SPINK1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6690 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11244 | |||
|TSSclassifier=S | |||
|UniProt=P00995 | |||
|association_with_transcript=17bp_to_NM_003122,uc003los.2_5end | |||
|coexpression_cluster_id=C27 | |||
|description=CAGE_peak_3_at_SPINK1_5end | |||
|id=chr5:147211226..147211242,- | |||
|ontology_enrichment_celltype=CL:0000181!2.12e-11!12;CL:0000417!2.12e-11!12;CL:0000668!2.12e-11!12;CL:0000414!2.12e-11!12;CL:0000412!2.12e-11!12;CL:0000182!2.12e-11!12 | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.85e-07;3!CL:0000182;4.04e-07;12!CL:0000632;4.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.04e-07,3;CL:0000182,4.07e-07,12;CL:0000632,5.05e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!5.25e-18!35;UBERON:0004921!7.86e-18!129;UBERON:0004185!7.86e-18!129;UBERON:0009854!6.65e-16!23;UBERON:0001007!1.75e-14!155;UBERON:0001555!1.75e-14!155;UBERON:0007026!1.75e-14!155;UBERON:0009497!1.86e-14!25;UBERON:0000015!1.86e-14!25;UBERON:0002423!1.86e-14!25;UBERON:0006235!1.86e-14!25;UBERON:0004161!1.86e-14!25;UBERON:0008835!5.74e-14!22;UBERON:0003894!5.74e-14!22;UBERON:0005057!6.89e-14!26;UBERON:0002107!7.60e-14!19;UBERON:0006925!7.60e-14!19;UBERON:0008836!7.60e-14!19;UBERON:0009856!9.62e-14!26;UBERON:0000160!2.15e-13!27;UBERON:0000059!1.08e-12!11;UBERON:0004119!1.49e-12!169;UBERON:0000925!1.49e-12!169;UBERON:0006595!1.49e-12!169;UBERON:0007499!5.37e-12!25;UBERON:0003929!8.10e-12!54;UBERON:0000077!1.43e-10!130;UBERON:0004907!1.01e-09!5;UBERON:0001046!6.39e-09!19;UBERON:0001155!1.57e-08!9;UBERON:0002368!4.95e-08!35;UBERON:0002365!1.13e-07!31;UBERON:0002330!1.13e-07!31;UBERON:0005172!2.34e-07!55;UBERON:0005173!2.34e-07!55;UBERON:0001052!3.28e-07!4;UBERON:0000949!5.17e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.32e-34;22!UBERON:0000160;3.10e-26;17!UBERON:0004921;2.64e-20;33!UBERON:0000059;9.03e-16;11!UBERON:0001155;8.37e-14;9!UBERON:0002107;3.98e-12;19!UBERON:0006925;3.98e-12;19!UBERON:0001007;7.91e-12;81!UBERON:0002423;1.16e-11;25!UBERON:0002108;6.12e-10;4!UBERON:0000945;1.99e-09;5!UBERON:0010039;1.99e-09;5!UBERON:0004907;2.17e-09;5!UBERON:0002368;1.53e-07;33!UBERON:0001555;2.30e-07;54!UBERON:0002365;2.47e-07;31!UBERON:0002330;2.47e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.90e-30,25;UBERON:0000160,2.98e-26,17;UBERON:0004921,1.81e-22,118;UBERON:0001007,7.28e-19,145;UBERON:0001555,7.28e-19,145;UBERON:0007026,7.28e-19,145;UBERON:0004119,1.51e-16,160;UBERON:0000925,1.51e-16,160;UBERON:0006595,1.51e-16,160;UBERON:0000059,8.68e-16,11;UBERON:0001155,8.37e-14,9;UBERON:0003929,6.28e-13,54;UBERON:0009854,1.07e-12,23;UBERON:0002107,4.23e-12,19;UBERON:0006925,4.23e-12,19;UBERON:0008836,4.23e-12,19;UBERON:0001046,6.98e-12,19;UBERON:0009497,1.22e-11,25;UBERON:0000015,1.22e-11,25;UBERON:0002423,1.22e-11,25;UBERON:0006235,1.22e-11,25;UBERON:0004161,1.22e-11,25;UBERON:0009856,4.36e-11,26;UBERON:0011216,4.90e-11,223;UBERON:0008835,2.55e-10,22;UBERON:0003894,2.55e-10,22;UBERON:0002108,6.12e-10,4;UBERON:0004907,2.11e-09,5;UBERON:0007499,5.72e-09,25;UBERON:0002368,6.33e-08,35;UBERON:0005911,1.32e-07,82;UBERON:0000949,1.59e-07,45;UBERON:0005172,2.29e-07,54;UBERON:0005173,2.29e-07,54;UBERON:0002365,4.73e-07,31;UBERON:0002330,4.73e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.619412741790207,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53643503843824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.580969714347592,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,438.572420483535,761.69109292516,458.45296758477,0,57.8045661152634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,47.2560447903243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,4.42054264849836,7.55798243562828,0,0,0,0,0.179021174675609,0,10.2589141862411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71314828557017,38.8720946443337,0,19.9052386215701,14.6839557075543,26.8853263770795,0.296521128680622,0,0,0.202203398942031,0,0,0,0,0,0,4909.80325725478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,9.60538476327087,0,6.77224960624298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0,0,0,0.551482276150566,0.247247575143499,0.539228350833479,19.587068821435,0,0,0,0,0,0,0,0,0,0,6.93490224232944,3.09482069996489,0,0,0,0,0,0,0,0,0,0,0,0,0,133.655637114411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9073.3776704162,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70958557103084,0,0.280272163313789,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,1.3741032706134,0,0,0,0,5.34282092365053,0,0,0,0,0,0,22.4576800094119,45.6789481453271,0,2.45148321753905,0,0,0,1.6906229103336,0,0,0.966868319603658,0,0,0,0,320.617674440221,0,0,0,0,0,3283.66959907909,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0.803892390468535,0,0,0.426467963801962,0,0,5.27635071514792,0,0,0,0,0,0,0.358611026963382,1.66330178273007,0,0,0,0,30.5033225124491,0,0,7.98908129022615,0,0 | |||
|short_description=p3@SPINK1 | |||
}} |
Revision as of 13:54, 13 September 2013
Short description: | p3@SPINK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SPINK1_5end |
Coexpression cluster: | C27_pancreas_temporal_duodenum_salivary_ductus_umbilical_lung |
Association with transcript: | 17bp_to_NM_003122, uc003los.2_5end |
EntrezGene: | SPINK1 |
HGNC: | 11244 |
UniProt: | P00995 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.04e-07 | 3 |
hepatocyte | 4.07e-07 | 12 |
hepatic stellate cell | 5.05e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.