FFCP PHASE1:Hg19::chr5:145439397..145439432,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=153769|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=26299|TSSclassifier=S|UniProt=|association_with_transcript=45bp_to_uc011dbo.1_5end|coexpression_cluster_id=C20|description=CAGE_peak_2_at_SH3RF2_5end|id=chr5:145439397..145439432,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005062;1.51e-24;4!UBERON:0007284;1.51e-24;4!UBERON:0010226;2.93e-12;1!UBERON:0010227;3.65e-12;1!UBERON:0004140;4.06e-12;1!UBERON:0000358;6.26e-12;1!UBERON:0006603;8.93e-08;65!UBERON:0004872;6.11e-07;7|ontology_enrichment_disease=DOID:114!6.48e-08!2|ontology_enrichment_disease_v019=DOID:114;2.56e-22;2!DOID:178;5.05e-12;1!DOID:326;5.05e-12;1!DOID:3978;5.05e-12;1!DOID:3394;5.05e-12;1!DOID:5844;5.05e-12;1!DOID:1287;1.19e-11;4|ontology_enrichment_disease_v019_2=DOID:114,2.56e-22,2;DOID:178,5.05e-12,1;DOID:326,5.05e-12,1;DOID:3978,5.05e-12,1;DOID:3394,5.05e-12,1;DOID:5844,5.05e-12,1;DOID:1287,1.19e-11,4|ontology_enrichment_uberon=UBERON:0007023!9.77e-15!115;UBERON:0004151!4.34e-11!3;UBERON:0003978!5.11e-11!3;UBERON:0009751!5.11e-11!3;UBERON:0000946!5.11e-11!3;UBERON:0002523!5.11e-11!3;UBERON:0005983!5.11e-11!3;UBERON:0002165!5.11e-11!3;UBERON:0002062!5.11e-11!3;UBERON:0007280!5.11e-11!3;UBERON:0007100!1.20e-08!27;UBERON:0002081!6.69e-08!2;UBERON:0002133!7.63e-08!2;UBERON:0000341!2.66e-07!2|ontology_enrichment_uberon_v019=UBERON:0007100;1.67e-33;25!UBERON:0004151;1.02e-32;3!UBERON:0003978;1.75e-32;3!UBERON:0000946;1.75e-32;3!UBERON:0002081;2.85e-22;2!UBERON:0002133;4.37e-22;2!UBERON:0000948;3.66e-17;22!UBERON:0002084;2.93e-12;1!UBERON:0002082;2.93e-12;1!UBERON:0002146;3.27e-12;1!UBERON:0005623;3.27e-12;1!UBERON:0002079;3.65e-12;1!UBERON:0002135;5.62e-12;1!UBERON:0002134;6.97e-12;1!UBERON:0005208;6.97e-12;1!UBERON:0004145;6.97e-12;1!UBERON:0005946;6.97e-12;1!UBERON:0005965;6.97e-12;1!UBERON:0002078;6.97e-12;1!UBERON:0007029;7.76e-12;1!UBERON:0010313;3.52e-10;10!UBERON:0003103;1.19e-07;61|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.02e-32,3;UBERON:0003978,1.75e-32,3;UBERON:0009751,1.75e-32,3;UBERON:0000946,1.75e-32,3;UBERON:0002523,1.75e-32,3;UBERON:0005983,1.75e-32,3;UBERON:0002165,1.75e-32,3;UBERON:0002062,1.75e-32,3;UBERON:0007280,1.75e-32,3;UBERON:0007100,6.04e-31,27;UBERON:0002081,2.85e-22,2;UBERON:0010227,2.85e-22,2;UBERON:0002133,4.37e-22,2;UBERON:0000948,1.05e-15,24;UBERON:0005498,1.05e-15,24;UBERON:0004140,1.05e-15,24;UBERON:0009881,1.05e-15,24;UBERON:0004141,1.05e-15,24;UBERON:0003084,1.05e-15,24;UBERON:0007005,1.05e-15,24;UBERON:0004139,1.05e-15,24;UBERON:0004291,1.05e-15,24;UBERON:0003103,2.50e-14,68;UBERON:0004797,2.65e-14,7;UBERON:0002084,2.93e-12,1;UBERON:0002082,2.93e-12,1;UBERON:0010226,2.93e-12,1;UBERON:0002146,3.27e-12,1;UBERON:0005623,3.27e-12,1;UBERON:0002079,3.65e-12,1;UBERON:0002135,5.62e-12,1;UBERON:0002134,6.97e-12,1;UBERON:0005208,6.97e-12,1;UBERON:0005946,6.97e-12,1;UBERON:0005965,6.97e-12,1;UBERON:0002078,6.97e-12,1;UBERON:0007029,7.76e-12,1;UBERON:0010313,3.52e-10,10;UBERON:0002342,3.52e-10,10;UBERON:0005062,3.52e-10,10;UBERON:0001009,3.84e-08,112;UBERON:0007023,6.26e-08,114|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784250137270958,1.1747511088309,0.189753732724185,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,120.929279750886,457.404206327321,43.7902544991857,147.363102368255,387.161895419187,651.437484272826,428.227453630393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0.10490917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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=153769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=26299 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=45bp_to_uc011dbo.1_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_2_at_SH3RF2_5end | |||
|id=chr5:145439397..145439432,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.51e-24;4!UBERON:0007284;1.51e-24;4!UBERON:0010226;2.93e-12;1!UBERON:0010227;3.65e-12;1!UBERON:0004140;4.06e-12;1!UBERON:0000358;6.26e-12;1!UBERON:0006603;8.93e-08;65!UBERON:0004872;6.11e-07;7 | |||
|ontology_enrichment_disease=DOID:114!6.48e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.56e-22;2!DOID:178;5.05e-12;1!DOID:326;5.05e-12;1!DOID:3978;5.05e-12;1!DOID:3394;5.05e-12;1!DOID:5844;5.05e-12;1!DOID:1287;1.19e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.56e-22,2;DOID:178,5.05e-12,1;DOID:326,5.05e-12,1;DOID:3978,5.05e-12,1;DOID:3394,5.05e-12,1;DOID:5844,5.05e-12,1;DOID:1287,1.19e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.77e-15!115;UBERON:0004151!4.34e-11!3;UBERON:0003978!5.11e-11!3;UBERON:0009751!5.11e-11!3;UBERON:0000946!5.11e-11!3;UBERON:0002523!5.11e-11!3;UBERON:0005983!5.11e-11!3;UBERON:0002165!5.11e-11!3;UBERON:0002062!5.11e-11!3;UBERON:0007280!5.11e-11!3;UBERON:0007100!1.20e-08!27;UBERON:0002081!6.69e-08!2;UBERON:0002133!7.63e-08!2;UBERON:0000341!2.66e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.67e-33;25!UBERON:0004151;1.02e-32;3!UBERON:0003978;1.75e-32;3!UBERON:0000946;1.75e-32;3!UBERON:0002081;2.85e-22;2!UBERON:0002133;4.37e-22;2!UBERON:0000948;3.66e-17;22!UBERON:0002084;2.93e-12;1!UBERON:0002082;2.93e-12;1!UBERON:0002146;3.27e-12;1!UBERON:0005623;3.27e-12;1!UBERON:0002079;3.65e-12;1!UBERON:0002135;5.62e-12;1!UBERON:0002134;6.97e-12;1!UBERON:0005208;6.97e-12;1!UBERON:0004145;6.97e-12;1!UBERON:0005946;6.97e-12;1!UBERON:0005965;6.97e-12;1!UBERON:0002078;6.97e-12;1!UBERON:0007029;7.76e-12;1!UBERON:0010313;3.52e-10;10!UBERON:0003103;1.19e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.02e-32,3;UBERON:0003978,1.75e-32,3;UBERON:0009751,1.75e-32,3;UBERON:0000946,1.75e-32,3;UBERON:0002523,1.75e-32,3;UBERON:0005983,1.75e-32,3;UBERON:0002165,1.75e-32,3;UBERON:0002062,1.75e-32,3;UBERON:0007280,1.75e-32,3;UBERON:0007100,6.04e-31,27;UBERON:0002081,2.85e-22,2;UBERON:0010227,2.85e-22,2;UBERON:0002133,4.37e-22,2;UBERON:0000948,1.05e-15,24;UBERON:0005498,1.05e-15,24;UBERON:0004140,1.05e-15,24;UBERON:0009881,1.05e-15,24;UBERON:0004141,1.05e-15,24;UBERON:0003084,1.05e-15,24;UBERON:0007005,1.05e-15,24;UBERON:0004139,1.05e-15,24;UBERON:0004291,1.05e-15,24;UBERON:0003103,2.50e-14,68;UBERON:0004797,2.65e-14,7;UBERON:0002084,2.93e-12,1;UBERON:0002082,2.93e-12,1;UBERON:0010226,2.93e-12,1;UBERON:0002146,3.27e-12,1;UBERON:0005623,3.27e-12,1;UBERON:0002079,3.65e-12,1;UBERON:0002135,5.62e-12,1;UBERON:0002134,6.97e-12,1;UBERON:0005208,6.97e-12,1;UBERON:0005946,6.97e-12,1;UBERON:0005965,6.97e-12,1;UBERON:0002078,6.97e-12,1;UBERON:0007029,7.76e-12,1;UBERON:0010313,3.52e-10,10;UBERON:0002342,3.52e-10,10;UBERON:0005062,3.52e-10,10;UBERON:0001009,3.84e-08,112;UBERON:0007023,6.26e-08,114 | |||
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|short_description=p2@SH3RF2 | |||
}} |
Revision as of 13:48, 13 September 2013
Short description: | p2@SH3RF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SH3RF2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 45bp_to_uc011dbo.1_5end |
EntrezGene: | SH3RF2 |
HGNC: | 26299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.56e-22 | 2 |
vascular disease | 5.05e-12 | 1 |
ischemia | 5.05e-12 | 1 |
extrinsic cardiomyopathy | 5.05e-12 | 1 |
myocardial ischemia | 5.05e-12 | 1 |
myocardial infarction | 5.05e-12 | 1 |
cardiovascular system disease | 1.19e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.