FFCP PHASE1:Hg19::chr5:142814316..142814335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2908|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7978|TSSclassifier=S|UniProt=|association_with_transcript=1bp_to_ENST00000505058_5end|coexpression_cluster_id=C4433|description=CAGE_peak_18_at_NR3C1_5end|id=chr5:142814316..142814335,-|ontology_enrichment_celltype=CL:0002087!1.29e-55!119;CL:0000738!2.61e-54!140;CL:0002031!2.65e-47!124;CL:0000037!8.71e-40!172;CL:0000566!8.71e-40!172;CL:0002057!1.43e-39!42;CL:0000988!6.94e-38!182;CL:0000860!7.96e-36!45;CL:0002032!2.33e-35!165;CL:0000837!2.33e-35!165;CL:0002194!7.15e-29!63;CL:0000576!7.15e-29!63;CL:0000040!7.15e-29!63;CL:0000559!7.15e-29!63;CL:0002009!1.85e-27!65;CL:0000766!4.39e-25!76;CL:0000839!2.69e-24!70;CL:0000557!1.01e-23!71;CL:0000838!4.96e-23!52;CL:0000542!2.49e-22!53;CL:0000051!2.49e-22!53;CL:0000763!1.55e-14!112;CL:0000049!1.55e-14!112;CL:0000945!1.69e-12!24;CL:0000826!1.69e-12!24;CL:0000084!6.19e-10!25;CL:0000827!6.19e-10!25;CL:0002393!2.03e-09!9;CL:0002397!2.03e-09!9;CL:0000791!3.27e-09!18;CL:0000789!3.27e-09!18;CL:0002420!3.27e-09!18;CL:0002419!3.27e-09!18;CL:0000790!3.27e-09!18;CL:0000134!1.42e-07!358;CL:0000624!1.99e-07!6;CL:0002320!5.87e-07!365|ontology_enrichment_celltype_v019=CL:0000860;2.21e-31;33!CL:0002057;2.21e-31;33!CL:0000473;6.37e-27;39!CL:0000234;6.37e-27;39!CL:0000576;5.44e-23;48!CL:0002087;2.65e-17;104!CL:0000766;1.20e-15;69!CL:0000738;7.87e-14;136!CL:0000945;4.31e-11;24!CL:0000542;8.11e-11;53!CL:0000624;1.20e-09;6!CL:0000784;5.72e-09;3!CL:0000898;1.16e-07;3!CL:0000763;1.23e-07;100!CL:0000226;4.09e-07;3!CL:0000875;4.09e-07;3!CL:0000842;4.09e-07;3!CL:0002396;4.09e-07;3|ontology_enrichment_celltype_v019_2=CL:0002087,1.50e-55,115;CL:0000738,7.74e-55,136;CL:0002031,1.39e-46,120;CL:0000860,9.59e-46,42;CL:0002057,9.59e-46,42;CL:0000473,2.23e-44,48;CL:0000234,2.23e-44,48;CL:0000037,3.27e-41,168;CL:0000988,1.07e-39,177;CL:0002194,4.17e-36,59;CL:0000576,4.17e-36,59;CL:0000040,4.17e-36,59;CL:0000559,4.17e-36,59;CL:0002032,2.17e-35,161;CL:0000837,2.17e-35,161;CL:0002009,1.30e-34,61;CL:0000766,5.50e-32,72;CL:0000839,2.82e-31,66;CL:0000557,1.14e-30,67;CL:0000763,2.95e-19,108;CL:0000049,2.95e-19,108;CL:0000838,9.51e-16,52;CL:0000542,2.45e-15,53;CL:0000051,2.45e-15,53;CL:0000134,4.41e-13,354;CL:0002320,1.64e-12,361;CL:0000945,4.75e-11,24;CL:0000826,4.75e-11,24;CL:0002393,5.34e-11,9;CL:0002397,5.34e-11,9;CL:0000219,1.62e-10,386;CL:0000624,4.83e-10,6;CL:0000784,5.73e-09,3;CL:0000048,4.03e-08,427;CL:0000898,7.03e-08,3;CL:0000723,8.53e-08,433;CL:0000034,2.24e-07,441;CL:0000226,4.14e-07,3;CL:0000842,4.14e-07,3;CL:0000875,4.52e-07,3;CL:0002396,4.52e-07,3|ontology_enrichment_development_v019=CL:0002057;9.41e-33;42!CL:0000051;8.11e-11;53!CL:0000049;6.18e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.27e-28!102;UBERON:0003061!2.27e-28!102;UBERON:0002193!5.94e-25!112;UBERON:0002371!3.67e-20!80;UBERON:0001474!1.25e-17!86;UBERON:0002405!2.79e-17!115;UBERON:0004765!1.84e-13!101;UBERON:0001434!1.84e-13!101;UBERON:0007023!5.88e-10!115;UBERON:0000178!9.97e-07!15;UBERON:0000179!9.97e-07!15;UBERON:0000463!9.97e-07!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-31,98;UBERON:0003061,1.30e-31,98;UBERON:0002193,1.37e-27,108;UBERON:0002371,6.42e-26,76;UBERON:0002405,6.46e-24,93;UBERON:0001474,2.46e-23,82;UBERON:0004765,1.97e-20,90;UBERON:0001434,1.82e-17,100;UBERON:0002384,9.76e-12,371;UBERON:0003081,4.09e-10,203;UBERON:0002204,4.63e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59805579543034,1.72411237844886,2.20390187678302,1.96682138424452,2.30297638858328,0.928896739896456,0,0,0,1.54934401160603,0.853015394924529,0.293600439334847,1.10799081706375,0.601633342410425,0.651032612147555,0,0,0,0.726991193897824,0.755751887377619,0.727752183563449,0.697287110717054,0,0.929119112685311,3.16461631554365,1.7931249457037,2.12834006899727,2.06847408441971,1.93645405075148,1.35426486594342,2.63539275359647,0.545812300115692,1.57306439111559,2.14258724659632,1.92557416245656,2.55734850319616,2.30895910130701,1.79517291859469,1.70489900213078,1.16083695451434,1.70215567407342,0.622822248995575,4.27122730936464,2.60741459210101,3.9093992046921,2.42159801053347,2.94622108790052,2.53169909952708,2.11255286311942,1.06302149982522,1.88692780957538,1.68492946719743,0.750884464207532,3.05378614724452,1.71007646244749,1.19350006319454,1.27864907635244,0,1.09227722252426,0,0.426730222566507,0.400395987036012,1.14950487990897,0,1.90810750907073,1.1384259382189,0.587237189370939,1.52909291250092,0,0,0.790152254325231,1.96709770113833,0.393010762749165,2.46721798799411,0,1.62961133316795,1.4203434172042,3.89653456815823,1.00269411196656,1.76763544484902,1.10766947291811,1.35401931882508,0.128091319725675,0.260118695119756,0.328875809207352,0.552700035571697,0.869409257205157,1.77943875794473,2.67540828089713,1.04535523804977,0,4.98186641682498,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=1bp_to_ENST00000505058_5end | |||
|coexpression_cluster_id=C4433 | |||
|description=CAGE_peak_18_at_NR3C1_5end | |||
|id=chr5:142814316..142814335,- | |||
|ontology_enrichment_celltype=CL:0002087!1.29e-55!119;CL:0000738!2.61e-54!140;CL:0002031!2.65e-47!124;CL:0000037!8.71e-40!172;CL:0000566!8.71e-40!172;CL:0002057!1.43e-39!42;CL:0000988!6.94e-38!182;CL:0000860!7.96e-36!45;CL:0002032!2.33e-35!165;CL:0000837!2.33e-35!165;CL:0002194!7.15e-29!63;CL:0000576!7.15e-29!63;CL:0000040!7.15e-29!63;CL:0000559!7.15e-29!63;CL:0002009!1.85e-27!65;CL:0000766!4.39e-25!76;CL:0000839!2.69e-24!70;CL:0000557!1.01e-23!71;CL:0000838!4.96e-23!52;CL:0000542!2.49e-22!53;CL:0000051!2.49e-22!53;CL:0000763!1.55e-14!112;CL:0000049!1.55e-14!112;CL:0000945!1.69e-12!24;CL:0000826!1.69e-12!24;CL:0000084!6.19e-10!25;CL:0000827!6.19e-10!25;CL:0002393!2.03e-09!9;CL:0002397!2.03e-09!9;CL:0000791!3.27e-09!18;CL:0000789!3.27e-09!18;CL:0002420!3.27e-09!18;CL:0002419!3.27e-09!18;CL:0000790!3.27e-09!18;CL:0000134!1.42e-07!358;CL:0000624!1.99e-07!6;CL:0002320!5.87e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-31;33!CL:0002057;2.21e-31;33!CL:0000473;6.37e-27;39!CL:0000234;6.37e-27;39!CL:0000576;5.44e-23;48!CL:0002087;2.65e-17;104!CL:0000766;1.20e-15;69!CL:0000738;7.87e-14;136!CL:0000945;4.31e-11;24!CL:0000542;8.11e-11;53!CL:0000624;1.20e-09;6!CL:0000784;5.72e-09;3!CL:0000898;1.16e-07;3!CL:0000763;1.23e-07;100!CL:0000226;4.09e-07;3!CL:0000875;4.09e-07;3!CL:0000842;4.09e-07;3!CL:0002396;4.09e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.50e-55,115;CL:0000738,7.74e-55,136;CL:0002031,1.39e-46,120;CL:0000860,9.59e-46,42;CL:0002057,9.59e-46,42;CL:0000473,2.23e-44,48;CL:0000234,2.23e-44,48;CL:0000037,3.27e-41,168;CL:0000988,1.07e-39,177;CL:0002194,4.17e-36,59;CL:0000576,4.17e-36,59;CL:0000040,4.17e-36,59;CL:0000559,4.17e-36,59;CL:0002032,2.17e-35,161;CL:0000837,2.17e-35,161;CL:0002009,1.30e-34,61;CL:0000766,5.50e-32,72;CL:0000839,2.82e-31,66;CL:0000557,1.14e-30,67;CL:0000763,2.95e-19,108;CL:0000049,2.95e-19,108;CL:0000838,9.51e-16,52;CL:0000542,2.45e-15,53;CL:0000051,2.45e-15,53;CL:0000134,4.41e-13,354;CL:0002320,1.64e-12,361;CL:0000945,4.75e-11,24;CL:0000826,4.75e-11,24;CL:0002393,5.34e-11,9;CL:0002397,5.34e-11,9;CL:0000219,1.62e-10,386;CL:0000624,4.83e-10,6;CL:0000784,5.73e-09,3;CL:0000048,4.03e-08,427;CL:0000898,7.03e-08,3;CL:0000723,8.53e-08,433;CL:0000034,2.24e-07,441;CL:0000226,4.14e-07,3;CL:0000842,4.14e-07,3;CL:0000875,4.52e-07,3;CL:0002396,4.52e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.41e-33;42!CL:0000051;8.11e-11;53!CL:0000049;6.18e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.27e-28!102;UBERON:0003061!2.27e-28!102;UBERON:0002193!5.94e-25!112;UBERON:0002371!3.67e-20!80;UBERON:0001474!1.25e-17!86;UBERON:0002405!2.79e-17!115;UBERON:0004765!1.84e-13!101;UBERON:0001434!1.84e-13!101;UBERON:0007023!5.88e-10!115;UBERON:0000178!9.97e-07!15;UBERON:0000179!9.97e-07!15;UBERON:0000463!9.97e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.30e-31,98;UBERON:0003061,1.30e-31,98;UBERON:0002193,1.37e-27,108;UBERON:0002371,6.42e-26,76;UBERON:0002405,6.46e-24,93;UBERON:0001474,2.46e-23,82;UBERON:0004765,1.97e-20,90;UBERON:0001434,1.82e-17,100;UBERON:0002384,9.76e-12,371;UBERON:0003081,4.09e-10,203;UBERON:0002204,4.63e-07,167 | |||
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|short_description=p18@NR3C1 | |||
}} |
Revision as of 13:45, 13 September 2013
Short description: | p18@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_NR3C1_5end |
Coexpression cluster: | C4433_Dendritic_CD4_lymphoma_chronic_Hepatocyte_CD19_mycosis |
Association with transcript: | 1bp_to_ENST00000505058_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.30e-31 | 98 |
blood island | 1.30e-31 | 98 |
hemolymphoid system | 1.37e-27 | 108 |
bone marrow | 6.42e-26 | 76 |
immune system | 6.46e-24 | 93 |
bone element | 2.46e-23 | 82 |
skeletal element | 1.97e-20 | 90 |
skeletal system | 1.82e-17 | 100 |
connective tissue | 9.76e-12 | 371 |
lateral plate mesoderm | 4.09e-10 | 203 |
musculoskeletal system | 4.63e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.