FFCP PHASE1:Mm9::chr16:91011523..91011541,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67394|HGNC=|MCL_coexpression_id=6|UniProt=|association_with_transcript=29bp_to_ENSMUST00000154854,NR_028368,uc007zwy.2_5end|description=CAGE_peak_2_at_4930404I05Rik_5end|id=chr16:91011523..91011541,+|ontology_enrichment_celltype=CL:0000988!4.80e-10!32;CL:0002032!4.80e-10!32;CL:0000037!4.80e-10!32;CL:0000566!4.80e-10!32;CL:0000837!4.80e-10!32;CL:0000049!1.40e-09!19;CL:0002320!1.84e-08!46;CL:0000134!1.84e-08!46;CL:0000063!5.39e-08!66;CL:0000034!2.70e-07!97;CL:0000144!3.47e-07!121;CL:0000012!3.47e-07!121;CL:0000219!6.70e-07!54;CL:0000763!7.24e-07!16|ontology_enrichment_celltype_v019_2=CL:0000049,1.85e-12,19;CL:0000557,2.32e-09,7;CL:0002476,6.22e-09,2;CL:0000988,9.40e-09,32;CL:0002032,9.40e-09,32;CL:0000037,9.40e-09,32;CL:0000837,9.40e-09,32;CL:0000034,7.81e-08,97;CL:0002320,4.40e-07,46;CL:0000134,4.40e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.26e-14,3;DOID:4045,9.26e-14,3;DOID:0050686,4.28e-07,6|ontology_enrichment_uberon=UBERON:0002371!1.78e-08!16;UBERON:0002384!1.84e-08!46;UBERON:0002204!5.20e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.69e-09,32;UBERON:0002371,1.79e-08,16;UBERON:0002384,4.40e-07,46|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0.473193248037357,0.548457734422955,1.27316895539409,0.595303031057488,0.297872853602656,0.522399578277871,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,14.6486070757918,7.813353445238,6.28228492768558,38.2350467220159,10.2456822743767,14.5653105909346,0.125896817975577,0,0.183546752161682,0,0,0,0.58328969722285,0,0,1.17447824240415,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0.899899717281399,0,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,1.10115880999389,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0.372798891650601,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,1.55759661857696,5.99902730993408,2.28726408731516,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,3.60287069960601,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0,0,0,0,1.50791283939272,2.71952841909355,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,1.6794174278839,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0,0,0,0,3.38215763210514,0,0,0,0,0,0,0,0,2.17425708743405,3.74439008135225,0,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p2@4930404I05Rik}} | ||
|EntrezGene=67394 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENSMUST00000154854,NR_028368,uc007zwy.2_5end | |||
|description=CAGE_peak_2_at_4930404I05Rik_5end | |||
|id=chr16:91011523..91011541,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.80e-10!32;CL:0002032!4.80e-10!32;CL:0000037!4.80e-10!32;CL:0000566!4.80e-10!32;CL:0000837!4.80e-10!32;CL:0000049!1.40e-09!19;CL:0002320!1.84e-08!46;CL:0000134!1.84e-08!46;CL:0000063!5.39e-08!66;CL:0000034!2.70e-07!97;CL:0000144!3.47e-07!121;CL:0000012!3.47e-07!121;CL:0000219!6.70e-07!54;CL:0000763!7.24e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.85e-12,19;CL:0000557,2.32e-09,7;CL:0002476,6.22e-09,2;CL:0000988,9.40e-09,32;CL:0002032,9.40e-09,32;CL:0000037,9.40e-09,32;CL:0000837,9.40e-09,32;CL:0000034,7.81e-08,97;CL:0002320,4.40e-07,46;CL:0000134,4.40e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.26e-14,3;DOID:4045,9.26e-14,3;DOID:0050686,4.28e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.78e-08!16;UBERON:0002384!1.84e-08!46;UBERON:0002204!5.20e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.69e-09,32;UBERON:0002371,1.79e-08,16;UBERON:0002384,4.40e-07,46 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0.500895729946347,0.33575854382378,0.233612640595526,0.129123323441576,0,0,0,0,0.171200729931206,0.174840804837995,0,0,0.699561878128147,0.473193248037357,0.548457734422955,1.27316895539409,0.595303031057488,0.297872853602656,0.522399578277871,0,0.22940928106717,0.57423196411502,0,0.215471232685889,0,0.252030129759931,0,0.635030673459631,0,0,0,0,0,14.6486070757918,7.813353445238,6.28228492768558,38.2350467220159,10.2456822743767,14.5653105909346,0.125896817975577,0,0.183546752161682,0,0,0,0.58328969722285,0,0,1.17447824240415,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0.899899717281399,0,2.1314403448383,0,0.384218305321555,0,0,0,0,0,0,0,0.919218786610021,1.10115880999389,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0.372798891650601,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,0,0,0,0,0,0,0,0,1.55759661857696,5.99902730993408,2.28726408731516,0.149790639404823,0.457500602818626,0,0,0,0.20778804455956,0,0,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,3.60287069960601,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0.482443521363367,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0,0,0,0,1.50791283939272,2.71952841909355,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0.339956859987711,1.6794174278839,1.24379976423981,0,0,0,0,0,0,0.134864346384821,0,0,0,0,3.38215763210514,0,0,0,0,0,0,0,0,2.17425708743405,3.74439008135225,0,0,0,0,0,0,0,0.147689527174577,0.201932899896295,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@4930404I05Rik | |||
}} |
Revision as of 13:17, 13 September 2013
Short description: | p2@4930404I05Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4930404I05Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 29bp_to_ENSMUST00000154854, NR_028368, uc007zwy.2_5end |
EntrezGene: | 4930404I05Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.85e-12 | 19 |
granulocyte monocyte progenitor cell | 2.32e-09 | 7 |
bone marrow macrophage | 6.22e-09 | 2 |
hematopoietic cell | 9.40e-09 | 32 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 32 |
hematopoietic stem cell | 9.40e-09 | 32 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 32 |
stem cell | 7.81e-08 | 97 |
connective tissue cell | 4.40e-07 | 46 |
mesenchymal cell | 4.40e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.69e-09 | 32 |
bone marrow | 1.79e-08 | 16 |
connective tissue | 4.40e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.26e-14 | 3 |
muscle cancer | 9.26e-14 | 3 |
organ system cancer | 4.28e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.