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FFCP PHASE1:Mm9::chr16:90144074..90144102,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=21844|HGNC=|UniProt=Q6P1D6|association_with_transcript=-15bp_to_uc007zvw.2_5end|description=CAGE_peak_1_at_Tiam1_5end|id=chr16:90144074..90144102,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.38e-15!71;UBERON:0003075!2.38e-15!71;UBERON:0007284!2.38e-15!71;UBERON:0004121!7.97e-14!102;UBERON:0000924!7.97e-14!102;UBERON:0006601!7.97e-14!102;UBERON:0000153!1.43e-13!94;UBERON:0003056!3.79e-12!49;UBERON:0000033!1.75e-11!63;UBERON:0007811!2.64e-11!86;UBERON:0000955!3.55e-10!50;UBERON:0006238!3.55e-10!50;UBERON:0003080!7.13e-10!40;UBERON:0002780!9.73e-10!39;UBERON:0001890!9.73e-10!39;UBERON:0006240!9.73e-10!39;UBERON:0002616!1.27e-09!49;UBERON:0001049!5.41e-09!52;UBERON:0005068!5.41e-09!52;UBERON:0006241!5.41e-09!52;UBERON:0007135!5.41e-09!52;UBERON:0001017!1.16e-08!73;UBERON:0005743!1.16e-08!73;UBERON:0002791!2.28e-08!29;UBERON:0003528!2.28e-08!29;UBERON:0001893!2.28e-08!29;UBERON:0002020!8.62e-08!34;UBERON:0000073!1.44e-07!75;UBERON:0001016!1.44e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.68e-12,73;UBERON:0003056,4.43e-12,49;UBERON:0002346,1.75e-11,64;UBERON:0003075,1.75e-11,64;UBERON:0007284,1.75e-11,64;UBERON:0004121,2.54e-10,95;UBERON:0000924,2.54e-10,95;UBERON:0006601,2.54e-10,95;UBERON:0003080,8.40e-10,40;UBERON:0000955,9.40e-10,47;UBERON:0006238,9.40e-10,47;UBERON:0002780,1.15e-09,39;UBERON:0001890,1.15e-09,39;UBERON:0006240,1.15e-09,39;UBERON:0002616,3.35e-09,46;UBERON:0000073,3.63e-09,54;UBERON:0001049,7.29e-09,52;UBERON:0005068,7.29e-09,52;UBERON:0006241,7.29e-09,52;UBERON:0007135,7.29e-09,52;UBERON:0001017,1.55e-08,73;UBERON:0003528,2.74e-08,29;UBERON:0002791,2.74e-08,29;UBERON:0001893,2.74e-08,29;UBERON:0010314,3.98e-08,92;UBERON:0002020,1.01e-07,34;UBERON:0001016,1.74e-07,75|phase1_expression=3.68342348341026,0.697950815278722,0.454999239389536,0.60492842261366,0,3.3575854382378,1.16806320297763,1.42035655785734,4.92760527530834,7.2560003159818,0.34243593645101,1.59544317990673,2.05440875917447,1.13646523144697,4.33042690360362,2.42970320867791,2.09868563438444,0.788655413395594,0.274228867211478,0,11.6509307506966,5.26242041364692,5.48519557191764,1.75991665072747,1.37645568640302,0.57423196411502,0,0.646413698057667,2.09025761402011,3.2763916868791,1.55211357458713,19.0509202037889,22.1423323530445,15.8481681015439,10.3986583110459,10.805251948302,13.4751775133164,15.0671387065287,8.5946887897618,9.94695113550217,17.6469446409304,13.6609096991689,6.79714494243615,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.878744730937887,0.194429899074283,0.839918529752175,0,0.167782606057736,2.90144856804538,1.00828139742739,0.257259436035947,0.286533439938757,0,13.5552028775931,11.6378015439847,10.1413024560989,1.0165335962074,1.77858959222228,0,0,0.7104801149461,2.69640099466564,1.92109152660777,11.9243054154749,13.5005938331691,11.567872874326,6.85562362569129,6.84692476950002,12.6165523191403,16.2937300731002,10.1114066527102,9.91042928994498,10.3426743849002,7.98753972932466,12.5291973343684,13.2657083223494,14.5855743755893,8.09630697104005,14.6318278608237,12.3766580699216,5.59794312399969,6.69146899755784,9.69277118291563,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0,0,0,2.66844398250329,0,0,0,3.09855523508697,0,0,0,5.84525810730278,4.05375784760158,3.0331466700887,4.11061966988616,0.517875767294343,35.0323448192986,19.6038419245734,20.7036525252256,22.8309342283498,25.7735715344985,22.694620477191,22.9969862133306,0.741584903203122,0.722996784599558,6.19227386364912,4.20593809863264,4.41683036920787,4.363877278217,5.59175283654366,30.7419836862124,33.7209197969663,3.32094171771169,6.11057134980193,5.39912457894067,7.87835407853001,10.1857634795279,13.7250180845588,18.3455354084782,14.6012428961512,14.5757810678288,8.10373373782284,18.1710214635889,5.19380755636613,4.22983700074316,1.51633655060205,3.36706969418358,9.62891277924007,12.1848115349741,16.7457780718975,25.6198190320716,38.5086585196516,37.0248651623216,29.703446685434,5.17406741478031,22.8502072508813,30.0678667466833,24.6331573829528,12.2749610159442,15.5706459566335,17.4126083261083,12.1411460480687,15.5246728118425,4.91549231119264,10.2939162845886,12.2190304740105,9.73491130916859,7.97388603935727,5.58192390529146,5.91861838963026,3.54175617145327,3.08534225774756,1.86027155800326,3.48755421819505,1.75148013550754,2.30383789878873,1.64167464079095,2.10778904819225,1.90059983652932,1.97595103761946,1.61047702512446,26.49653351908,9.05560588937703,0.660837565967596,4.23120906661671,11.0909890278322,9.52170354627798,6.82997545007095,5.44545516483025,2.44615848229357,2.85338439168839,4.74529061544512,1.97638745668813,1.75934646160189,1.39269530428806,2.14460495831032,6.29173586057955,4.53889904736858,4.38110801159608,3.41402221715547,9.02563249616858,11.270773567308,6.10953983535943,5.81857461502877,6.87331034925122,6.89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|EntrezGene=21844
|HGNC=
|UniProt=Q6P1D6
|association_with_transcript=-15bp_to_uc007zvw.2_5end
|description=CAGE_peak_1_at_Tiam1_5end
|id=chr16:90144074..90144102,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0010371,1.68e-12,73;UBERON:0003056,4.43e-12,49;UBERON:0002346,1.75e-11,64;UBERON:0003075,1.75e-11,64;UBERON:0007284,1.75e-11,64;UBERON:0004121,2.54e-10,95;UBERON:0000924,2.54e-10,95;UBERON:0006601,2.54e-10,95;UBERON:0003080,8.40e-10,40;UBERON:0000955,9.40e-10,47;UBERON:0006238,9.40e-10,47;UBERON:0002780,1.15e-09,39;UBERON:0001890,1.15e-09,39;UBERON:0006240,1.15e-09,39;UBERON:0002616,3.35e-09,46;UBERON:0000073,3.63e-09,54;UBERON:0001049,7.29e-09,52;UBERON:0005068,7.29e-09,52;UBERON:0006241,7.29e-09,52;UBERON:0007135,7.29e-09,52;UBERON:0001017,1.55e-08,73;UBERON:0003528,2.74e-08,29;UBERON:0002791,2.74e-08,29;UBERON:0001893,2.74e-08,29;UBERON:0010314,3.98e-08,92;UBERON:0002020,1.01e-07,34;UBERON:0001016,1.74e-07,75
|phase1_expression=3.68342348341026,0.697950815278722,0.454999239389536,0.60492842261366,0,3.3575854382378,1.16806320297763,1.42035655785734,4.92760527530834,7.2560003159818,0.34243593645101,1.59544317990673,2.05440875917447,1.13646523144697,4.33042690360362,2.42970320867791,2.09868563438444,0.788655413395594,0.274228867211478,0,11.6509307506966,5.26242041364692,5.48519557191764,1.75991665072747,1.37645568640302,0.57423196411502,0,0.646413698057667,2.09025761402011,3.2763916868791,1.55211357458713,19.0509202037889,22.1423323530445,15.8481681015439,10.3986583110459,10.805251948302,13.4751775133164,15.0671387065287,8.5946887897618,9.94695113550217,17.6469446409304,13.6609096991689,6.79714494243615,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,0.218025156380447,0.878744730937887,0.194429899074283,0.839918529752175,0,0.167782606057736,2.90144856804538,1.00828139742739,0.257259436035947,0.286533439938757,0,13.5552028775931,11.6378015439847,10.1413024560989,1.0165335962074,1.77858959222228,0,0,0.7104801149461,2.69640099466564,1.92109152660777,11.9243054154749,13.5005938331691,11.567872874326,6.85562362569129,6.84692476950002,12.6165523191403,16.2937300731002,10.1114066527102,9.91042928994498,10.3426743849002,7.98753972932466,12.5291973343684,13.2657083223494,14.5855743755893,8.09630697104005,14.6318278608237,12.3766580699216,5.59794312399969,6.69146899755784,9.69277118291563,0.075726193333184,0.0755715601067855,0,0,0.679971333707751,0,0,0,2.66844398250329,0,0,0,3.09855523508697,0,0,0,5.84525810730278,4.05375784760158,3.0331466700887,4.11061966988616,0.517875767294343,35.0323448192986,19.6038419245734,20.7036525252256,22.8309342283498,25.7735715344985,22.694620477191,22.9969862133306,0.741584903203122,0.722996784599558,6.19227386364912,4.20593809863264,4.41683036920787,4.363877278217,5.59175283654366,30.7419836862124,33.7209197969663,3.32094171771169,6.11057134980193,5.39912457894067,7.87835407853001,10.1857634795279,13.7250180845588,18.3455354084782,14.6012428961512,14.5757810678288,8.10373373782284,18.1710214635889,5.19380755636613,4.22983700074316,1.51633655060205,3.36706969418358,9.62891277924007,12.1848115349741,16.7457780718975,25.6198190320716,38.5086585196516,37.0248651623216,29.703446685434,5.17406741478031,22.8502072508813,30.0678667466833,24.6331573829528,12.2749610159442,15.5706459566335,17.4126083261083,12.1411460480687,15.5246728118425,4.91549231119264,10.2939162845886,12.2190304740105,9.73491130916859,7.97388603935727,5.58192390529146,5.91861838963026,3.54175617145327,3.08534225774756,1.86027155800326,3.48755421819505,1.75148013550754,2.30383789878873,1.64167464079095,2.10778904819225,1.90059983652932,1.97595103761946,1.61047702512446,26.49653351908,9.05560588937703,0.660837565967596,4.23120906661671,11.0909890278322,9.52170354627798,6.82997545007095,5.44545516483025,2.44615848229357,2.85338439168839,4.74529061544512,1.97638745668813,1.75934646160189,1.39269530428806,2.14460495831032,6.29173586057955,4.53889904736858,4.38110801159608,3.41402221715547,9.02563249616858,11.270773567308,6.10953983535943,5.81857461502877,6.87331034925122,6.89278254654404,4.13308414342886,4.08196692387575,5.05928372079382,0.592905254174298,4.33797274861845,5.70021085828289,5.39669069723649,5.47722327748958,6.75296047306767,4.07401362850272,4.31544206176216,3.72911021582581,1.09824565275233,4.31304619582064,2.60498663367952,1.5601883655728,0.505157755894224,1.07638448113147,0.964887042726734,2.58654466233247,8.14813070613084,7.33342393989116,5.7713329163564,5.39787571063555,2.84760637651087,2.85652369063216,0.780534591431195,4.88668946729192,1.32878813789265,2.55127629851979,3.11340297959902,1.20879487306127,3.03763023021174,0,0,5.90117127622843,6.07060841870411,6.90367536947505,7.73597131508541,2.13115428989678,0.757412781613119,10.4117712407365,10.1514073517126,8.18608911384636,12.1874086955802,9.80314165962534,12.4553673547086,6.47697122679831,4.9683495844923,5.53402889125133,35.3453448063988,6.38730383437209,4.80777129901589,5.53815661802159,1.97964147567043,3.98235415019888,9.46844481004428,11.1859716076958,5.46954731292105,2.65771703592696,5.22639751504677,1.80899805217755,4.36240475373007,6.06045543254026,7.26884543252377,2.10837217149998,1.03135543248187,13.6175842301515,10.9837267359099,7.63216234318252,9.64516657642165,9.75371285032505,14.0911365905636,9.54384319492302,8.22055362609418,8.44818149029357,9.10877904714427,0.882113592219848,16.488625294148,21.9591620306432,15.9829251059613,16.3540111284297,14.1161173780753,2.91480836629851,7.78786268444141,3.93003025835061,4.95328483111734,4.8150577116125,8.4765805652111,3.41735569302563,2.74533807847827,8.15896463970505,10.7762618289217,10.3649980353318,2.86401185404534,9.80641580101519,10.1659733563424,8.96444328820951,8.99079672862215,6.33251434863915,7.1478103583955,7.43881101528023,6.02038666563268,3.11075935900303,3.72803587852155,19.1655599152625,18.2410186173654,14.2294301793104,16.9172533859321,17.307416346016,21.9642963138012,27.1095221271692,46.7433741589781,45.0895181030557,26.8158374116867,21.0261904568242,11.0603892219862,11.3526120562492,11.6063381596255,13.5117655896907,14.143108957731,15.4971456729387,16.3465811347158,18.6088804239967,14.7411016924296,16.994117884065,12.8049255123787,13.0593560191268,12.7961749381638,11.92144402252,10.6563280299149,2.66383144048878,2.87084341150322,1.34307693091263,7.53439416725543,0.93841237725591,1.83151624267265,10.9327873330324,3.00943262421218,19.7663144915973,21.6352861158373,13.7494923225455,21.997207339992,15.0718154349541,14.3524840504043,21.6007200074178,22.9663813644352,16.7662691324156,14.497288729051,9.85979802049678,18.7541690498485,12.9757540373142,12.8846560046196,6.07878171621149,4.77993121970037,6.44515510624684,7.0051919461224,7.06022261101994,9.8551912587881,5.57654459758527,7.1678009726709,6.18033949301224,7.10679191694049,7.52404643318534,10.4784612082276,7.3007125345259,9.83837024364896,6.59337441285291,8.39033844766065,8.22886205724997,4.43689515398344,6.19934093863034,5.66851024866081,8.56395361779509,6.43071019976741,7.86590283352922,7.62902163169744,6.24698923690964,6.73370725989286,8.18581625056802,5.61475549540712,10.2307760792422,5.73266312388074,8.48789088317022,13.989392364525,10.5269223800434,8.80971321598023,5.16478496585877,3.30887128679273,2.08681052058379
|short_description=p1@Tiam1
}}

Revision as of 13:15, 13 September 2013

Short description:p1@Tiam1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tiam1_5end
Coexpression cluster:NA
Association with transcript: -15bp_to_uc007zvw.2_5end
EntrezGene:Tiam1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tiam1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.93
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.60
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.14
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.05
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G622.14
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.48
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G815.07
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H213.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.92
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D39.91
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G15.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D735.03
adrenal gland, embryo E14.CNhs11038.406-44C519.60
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I122.83
adrenal gland, embryo E18.CNhs11026.1262-18F525.77
adrenal gland, neonate N00.CNhs11191.1311-23C122.69
adrenal gland, neonate N25.CNhs11223.1377-27I323.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B230.74
cerebellum, neonate N30.CNhs11135.1395-42I233.72
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.11
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.88
corpora quadrigemina, adult.CNhs10501.16-22A410.19
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F118.35
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B218.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C69.63
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C916.75
eyeball, embryo E17.CNhs11023.1261-18D425.62
eyeball, neonate N00.CNhs11207.633-15C638.51
eyeball, neonate N01.CNhs11140.1532-43E737.02
eyeball, neonate N02.CNhs11205.1551-44G829.70
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E222.85
forelimb, embryo E12.CNhs10600.359-14H230.07
forelimb, embryo E13.CNhs10589.384-1E224.63
forelimb, embryo E14.CNhs10577.413-26A812.27
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C417.41
forelimb, embryo E18.CNhs11008.1520-43B512.14
gonad, embryo E13.CNhs11044.1564-45I615.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.22
heart, embryo E11.CNhs10586.331-24E99.73
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I95.58
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E31.75
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E826.50
hippocampus, neonate N00.CNhs11228.627-43G19.06
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I511.09
intestine, embryo E13.CNhs11010.381-16D59.52
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H45.45
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F89.03
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I26.11
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D56.89
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H15.06
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D75.48
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F87.33
lung, embryo E15.CNhs11020.432-17C55.77
lung, embryo E16.CNhs10998.458-17B65.40
lung, embryo E17.CNhs10605.480-44A62.85
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E54.89
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.15
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D912.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I935.35
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F49.47
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E55.47
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G813.62
pituitary gland, embryo E12.CNhs11018.346-16E610.98
pituitary gland, embryo E13.CNhs11009.370-44C77.63
pituitary gland, embryo E14.CNhs11037.398-44A59.65
pituitary gland, embryo E15.CNhs10592.427-16B99.75
pituitary gland, embryo E16.CNhs11036.449-43F614.09
pituitary gland, embryo E17.CNhs11039.1265-44F59.54
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I78.45
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C316.49
skin, neonate N00.CNhs11124.650-25G421.96
skin, neonate N03.CNhs11215.662-22H315.98
skin, neonate N06.CNhs11097.693-20I516.35
skin, neonate N10.CNhs11108.762-6C414.12
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F24.82
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G32.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.78
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.36
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G810.17
stomach, embryo E16.CNhs11022.459-17D48.96
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B87.15
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E46.02
stomach, neonate N30.CNhs11134.1386-42I13.11
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G519.17
testis, embryo E13.CNhs11031.389-23F518.24
testis, embryo E15.CNhs11034.443-27C514.23
testis, embryo E16.CNhs11033.470-26G516.92
testis, embryo E17.CNhs11029.486-18I517.31
testis, embryo E18.CNhs11027.503-18G521.96
testis, neonate N00.CNhs11189.1300-22B727.11
testis, neonate N07.CNhs11222.726-26I446.74
testis, neonate N10.CNhs11204.763-44D945.09
testis, neonate N20.CNhs11110.839-18H326.82
testis, neonate N30.CNhs11130.1391-42E221.03
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I411.35
thymus, embryo E15.CNhs11005.430-45I211.61
thymus, embryo E16.CNhs11002.456-26C513.51
thymus, embryo E17.CNhs10581.478-18C114.14
thymus, embryo E18.CNhs10595.1273-19G415.50
thymus, neonate N02.CNhs11181.1541-43F816.35
thymus, neonate N03.CNhs11137.2104-43C718.61
thymus, neonate N06.CNhs11197.681-26C414.74
thymus, neonate N07.CNhs11211.713-19D316.99
thymus, neonate N10.CNhs11194.748-24E412.80
thymus, neonate N20.CNhs11186.820-7A213.06
thymus, neonate N25.CNhs11125.1362-25G712.80
thymus, neonate N30.CNhs11132.1393-42G211.92
tongue, adult.CNhs10499.32-1B410.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.77
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I89.86
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H212.98
whole body, embryo E14.5.CNhs10578.420-27D212.88
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F24.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.17
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.25
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.73
whole body, embryo E17.5.CNhs10513.490-9F98.49
whole body, embryo E17.CNhs10517.475-3I513.99
whole body, embryo E18.CNhs10516.493-3B310.53
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ecto-epithelium1.68e-1273
pre-chordal neural plate4.43e-1249
neurectoderm1.75e-1164
neural plate1.75e-1164
presumptive neural plate1.75e-1164
ectoderm-derived structure2.54e-1095
ectoderm2.54e-1095
presumptive ectoderm2.54e-1095
anterior neural tube8.40e-1040
brain9.40e-1047
future brain9.40e-1047
regional part of forebrain1.15e-0939
forebrain1.15e-0939
future forebrain1.15e-0939
regional part of brain3.35e-0946
regional part of nervous system3.63e-0954
neural tube7.29e-0952
neural rod7.29e-0952
future spinal cord7.29e-0952
neural keel7.29e-0952
central nervous system1.55e-0873
brain grey matter2.74e-0829
regional part of telencephalon2.74e-0829
telencephalon2.74e-0829
structure with developmental contribution from neural crest3.98e-0892
gray matter1.01e-0734
nervous system1.74e-0775







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