FFCP PHASE1:Hg19::chr5:133510495..133510499,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6500|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10899|TSSclassifier=S|UniProt=E5RGM3|association_with_transcript=-39bp_to_ENST00000520417_5end|coexpression_cluster_id=C4225|description=CAGE_peak_7_at_SKP1_5end|id=chr5:133510495..133510499,-|ontology_enrichment_celltype=CL:0000542!1.92e-13!53;CL:0000051!1.92e-13!53;CL:0000037!2.59e-13!172;CL:0000566!2.59e-13!172;CL:0000838!3.91e-13!52;CL:0000738!2.17e-12!140;CL:0000988!2.48e-12!182;CL:0002087!4.15e-11!119;CL:0002032!6.01e-11!165;CL:0000837!6.01e-11!165;CL:0002031!4.01e-10!124;CL:0000791!2.53e-08!18;CL:0000789!2.53e-08!18;CL:0002420!2.53e-08!18;CL:0002419!2.53e-08!18;CL:0000790!2.53e-08!18;CL:0000084!3.05e-08!25;CL:0000827!3.05e-08!25|ontology_enrichment_celltype_v019=CL:0000542;1.35e-20;53!CL:0000084;1.63e-20;25!CL:0000791;8.51e-20;18!CL:0000789;8.51e-20;18!CL:0002419;8.51e-20;18!CL:0000623;1.13e-15;3!CL:0000625;5.72e-15;11!CL:0000236;9.61e-09;13!CL:0000624;9.94e-08;6!CL:0002393;2.73e-07;6!CL:0002397;2.73e-07;6|ontology_enrichment_celltype_v019_2=CL:0000838,1.60e-31,52;CL:0000542,7.76e-31,53;CL:0000051,7.76e-31,53;CL:0002087,3.17e-21,115;CL:0000084,1.47e-20,25;CL:0000827,1.47e-20,25;CL:0000738,2.19e-20,136;CL:0000791,4.57e-20,18;CL:0000789,4.57e-20,18;CL:0002420,4.57e-20,18;CL:0002419,4.57e-20,18;CL:0000790,4.57e-20,18;CL:0002031,4.84e-20,120;CL:0000037,4.45e-18,168;CL:0000988,8.04e-17,177;CL:0002032,3.55e-16,161;CL:0000837,3.55e-16,161;CL:0000623,1.25e-15,3;CL:0000825,1.25e-15,3;CL:0000625,3.83e-15,11;CL:0000236,3.28e-08,14;CL:0000624,7.67e-08,6|ontology_enrichment_development_v019=CL:0000051;1.35e-20;53!CL:0000790;8.51e-20;18|ontology_enrichment_disease=DOID:162!3.37e-10!235;DOID:14566!8.09e-10!239;DOID:0050686!3.63e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0.786728553697808,2.68680578668049,0.154816123316076,1.83884244895785,0,0,1.00707360754392,0.710846162437108,0.880801318004542,1.10799081706375,1.60435557976113,1.30206522429511,0.223915474239924,0,0,0.581592955118259,0.377875943688809,0,0.232429036905685,0.411167888021826,0,0,0,0,0,0,0,0.376484679085209,0,0.898893937780338,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0.632924774881769,0.422510572623884,0.637812899895131,0.628975936525128,0.112328631146495,0.150176892841506,0,0.285012743741249,0.79566670879636,0.365328307529268,0,1.09227722252426,0,1.70692089026603,0,0,0,0.954053754535364,3.98449078376614,2.34894875748376,1.91136614062614,0,0,0.263384084775077,1.7703879310245,3.93010762749165,3.90642848099067,0,0.977766799900771,0.473447805734733,3.89653456815823,0,0.589211814949674,0.443067789167242,0.812411591295047,0.25618263945135,0.390178042679635,0.657751618414705,0.276350017785848,0.579606171470105,0.296573126324121,0.267540828089713,2.09071047609954,0.113309342697566,0.766440987203842,1.03088233644789,0.253019692019503,0.95569624297229,1.30216690771284,1.90090408889675,0.150575119077773,0.127986611154418,0,0,1.64225599384209,3.22570789159572,5.34880391567015,3.91025890483557,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0,1.90792499444274,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0,0.206651562351531,0,0.494533858557114,0,0,0.505008341862199,0.250237039743928,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0,0,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.10075209822764,0,0.193260853163297,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0,0,0,0,1.18157981336281,1.7658523976586,0.122988438543114,0,0.109750285408626,0,0,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0,0,0,0,0.0895585227028483,0.290633938513962,0,0.492663237895943,0,0.207328115540772,0,0.50496973370552,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0,0.716243852959582,0.336255431980582,3.34952292343276,4.52817907204986,4.87703537863044,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0.315404830067869,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6500 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10899 | |||
|TSSclassifier=S | |||
|UniProt=E5RGM3 | |||
|association_with_transcript=-39bp_to_ENST00000520417_5end | |||
|coexpression_cluster_id=C4225 | |||
|description=CAGE_peak_7_at_SKP1_5end | |||
|id=chr5:133510495..133510499,- | |||
|ontology_enrichment_celltype=CL:0000542!1.92e-13!53;CL:0000051!1.92e-13!53;CL:0000037!2.59e-13!172;CL:0000566!2.59e-13!172;CL:0000838!3.91e-13!52;CL:0000738!2.17e-12!140;CL:0000988!2.48e-12!182;CL:0002087!4.15e-11!119;CL:0002032!6.01e-11!165;CL:0000837!6.01e-11!165;CL:0002031!4.01e-10!124;CL:0000791!2.53e-08!18;CL:0000789!2.53e-08!18;CL:0002420!2.53e-08!18;CL:0002419!2.53e-08!18;CL:0000790!2.53e-08!18;CL:0000084!3.05e-08!25;CL:0000827!3.05e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.35e-20;53!CL:0000084;1.63e-20;25!CL:0000791;8.51e-20;18!CL:0000789;8.51e-20;18!CL:0002419;8.51e-20;18!CL:0000623;1.13e-15;3!CL:0000625;5.72e-15;11!CL:0000236;9.61e-09;13!CL:0000624;9.94e-08;6!CL:0002393;2.73e-07;6!CL:0002397;2.73e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.60e-31,52;CL:0000542,7.76e-31,53;CL:0000051,7.76e-31,53;CL:0002087,3.17e-21,115;CL:0000084,1.47e-20,25;CL:0000827,1.47e-20,25;CL:0000738,2.19e-20,136;CL:0000791,4.57e-20,18;CL:0000789,4.57e-20,18;CL:0002420,4.57e-20,18;CL:0002419,4.57e-20,18;CL:0000790,4.57e-20,18;CL:0002031,4.84e-20,120;CL:0000037,4.45e-18,168;CL:0000988,8.04e-17,177;CL:0002032,3.55e-16,161;CL:0000837,3.55e-16,161;CL:0000623,1.25e-15,3;CL:0000825,1.25e-15,3;CL:0000625,3.83e-15,11;CL:0000236,3.28e-08,14;CL:0000624,7.67e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.35e-20;53!CL:0000790;8.51e-20;18 | |||
|ontology_enrichment_disease=DOID:162!3.37e-10!235;DOID:14566!8.09e-10!239;DOID:0050686!3.63e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p7@SKP1 | |||
}} |
Revision as of 13:12, 13 September 2013
Short description: | p7@SKP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SKP1_5end |
Coexpression cluster: | C4225_CD8_CD4_Natural_CD19_anaplastic_Peripheral_CD14 |
Association with transcript: | -39bp_to_ENST00000520417_5end |
EntrezGene: | SKP1 |
HGNC: | 10899 |
UniProt: | E5RGM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.60e-31 | 52 |
lymphocyte | 7.76e-31 | 53 |
common lymphoid progenitor | 7.76e-31 | 53 |
nongranular leukocyte | 3.17e-21 | 115 |
T cell | 1.47e-20 | 25 |
pro-T cell | 1.47e-20 | 25 |
leukocyte | 2.19e-20 | 136 |
mature alpha-beta T cell | 4.57e-20 | 18 |
alpha-beta T cell | 4.57e-20 | 18 |
immature T cell | 4.57e-20 | 18 |
mature T cell | 4.57e-20 | 18 |
immature alpha-beta T cell | 4.57e-20 | 18 |
hematopoietic lineage restricted progenitor cell | 4.84e-20 | 120 |
hematopoietic stem cell | 4.45e-18 | 168 |
hematopoietic cell | 8.04e-17 | 177 |
hematopoietic oligopotent progenitor cell | 3.55e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.55e-16 | 161 |
natural killer cell | 1.25e-15 | 3 |
pro-NK cell | 1.25e-15 | 3 |
CD8-positive, alpha-beta T cell | 3.83e-15 | 11 |
B cell | 3.28e-08 | 14 |
CD4-positive, alpha-beta T cell | 7.67e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.