FFCP PHASE1:Hg19::chr5:131631106..131631118,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6583|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10968|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000491257,uc010jdq.1_5end|coexpression_cluster_id=C26|description=CAGE_peak_5_at_SLC22A4_5end|id=chr5:131631106..131631118,+|ontology_enrichment_celltype=CL:0002057!4.41e-40!42;CL:0000860!2.41e-36!45;CL:0000766!8.40e-35!76;CL:0000763!1.64e-28!112;CL:0000049!1.64e-28!112;CL:0002194!1.70e-28!63;CL:0000576!1.70e-28!63;CL:0000040!1.70e-28!63;CL:0000559!1.70e-28!63;CL:0000839!3.69e-28!70;CL:0002009!4.01e-27!65;CL:0000557!1.41e-24!71;CL:0000037!4.86e-16!172;CL:0000566!4.86e-16!172;CL:0000738!1.39e-15!140;CL:0002032!1.28e-14!165;CL:0000837!1.28e-14!165;CL:0000988!5.46e-14!182;CL:0000048!8.22e-14!430;CL:0000723!3.97e-13!436;CL:0000034!8.64e-13!444;CL:0002087!3.20e-12!119;CL:0000094!2.69e-11!8;CL:0000134!2.79e-11!358;CL:0002031!4.93e-11!124;CL:0002320!1.63e-10!365;CL:0000219!2.86e-09!390;CL:0000081!1.46e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.65e-93;33!CL:0002057;1.65e-93;33!CL:0000473;6.92e-65;39!CL:0000234;6.92e-65;39!CL:0000576;4.51e-51;48!CL:0000766;5.36e-37;69!CL:0000094;1.00e-26;8!CL:0000081;4.98e-19;11!CL:0000763;1.60e-18;100!CL:0002087;8.38e-12;104!CL:0000775;1.86e-11;3!CL:0000767;1.58e-10;3!CL:0000738;3.22e-10;136!CL:0000771;3.37e-08;2|ontology_enrichment_celltype_v019_2=CL:0000860,2.04e-95,42;CL:0002057,2.04e-95,42;CL:0000473,2.77e-82,48;CL:0000234,2.77e-82,48;CL:0000766,8.03e-80,72;CL:0002194,6.70e-64,59;CL:0000576,6.70e-64,59;CL:0000040,6.70e-64,59;CL:0000559,6.70e-64,59;CL:0002009,1.58e-61,61;CL:0000839,1.53e-59,66;CL:0000557,2.98e-55,67;CL:0000763,8.80e-55,108;CL:0000049,8.80e-55,108;CL:0000738,2.69e-39,136;CL:0002032,3.81e-33,161;CL:0000837,3.81e-33,161;CL:0000037,6.26e-33,168;CL:0000988,1.10e-30,177;CL:0002087,2.93e-30,115;CL:0002031,1.24e-28,120;CL:0000094,8.10e-27,8;CL:0000081,4.27e-19,11;CL:0000775,1.74e-11,3;CL:0000134,3.36e-11,354;CL:0002320,9.19e-11,361;CL:0000767,1.43e-10,3;CL:0000219,3.13e-09,386;CL:0000048,3.66e-09,427;CL:0000034,4.08e-09,441;CL:0000723,7.14e-09,433;CL:0000771,3.20e-08,2|ontology_enrichment_development_v019=CL:0002057;1.08e-68;42!CL:0000049;4.65e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.40e-29!112;UBERON:0002390!7.23e-29!102;UBERON:0003061!7.23e-29!102;UBERON:0003081!2.33e-21!216;UBERON:0002371!4.37e-21!80;UBERON:0001474!1.63e-18!86;UBERON:0002405!9.91e-18!115;UBERON:0004765!1.46e-16!101;UBERON:0001434!1.46e-16!101;UBERON:0002204!1.88e-15!167;UBERON:0000178!6.11e-10!15;UBERON:0000179!6.11e-10!15;UBERON:0000463!6.11e-10!15;UBERON:0002384!6.59e-10!375;UBERON:0000926!6.70e-08!448;UBERON:0004120!6.70e-08!448;UBERON:0006603!6.70e-08!448|ontology_enrichment_uberon_v019=UBERON:0000178;9.04e-12;15!UBERON:0000179;9.04e-12;15!UBERON:0000463;9.04e-12;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.51e-54,98;UBERON:0003061,2.51e-54,98;UBERON:0002193,9.46e-51,108;UBERON:0002371,1.13e-47,76;UBERON:0001474,1.55e-43,82;UBERON:0002405,1.39e-39,93;UBERON:0004765,7.20e-39,90;UBERON:0001434,4.43e-34,100;UBERON:0003081,3.67e-27,203;UBERON:0002204,3.89e-19,167;UBERON:0000926,2.57e-14,315;UBERON:0004120,2.57e-14,315;UBERON:0006603,2.57e-14,315;UBERON:0000178,8.50e-12,15;UBERON:0000179,8.50e-12,15;UBERON:0000463,8.50e-12,15;UBERON:0002384,3.61e-10,371|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,6.68719270643137,3.45446458287491,5.26374819274658,0,0,0,0,0,0,11.0799081706375,7.01905566145496,5.859293509328,0,0,0,3.19876125315042,1.88937971844405,3.39617685662943,3.48643555358527,4.11167888021826,4.33588919253145,5.17846306179871,8.19714260893122,7.09446689665756,13.7898272294647,14.846147722428,10.8341189275473,6.77672422353377,2.72906150057846,6.74170453335254,15.9163624032869,11.5534449747394,10.8687311385837,2.96866170168044,6.18337338627059,5.96714650745772,8.70627715885752,5.6738522469114,6.22822248995575,11.3061899365534,13.037072960505,9.33912032232002,6.05399502633369,5.15588690382591,6.0127853613768,0,0.637812899895131,0.838634582033504,4.4931452458598,3.15371474967163,2.4108838004562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.550236083880135,0.208994966536811,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0,0,1.89853131913626,0,7.9068250461638,23.2668158488995,0,0,0,0.926864265692532,0,0,0,1.06748995729705,0,0,0,0.490385709340376,0,0,0,0.312160076830321,0,0,0,0,0.280901613404497,0.408308342509787,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0.504867548488229,0.184099797284599,0,0.35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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6583 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10968 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000491257,uc010jdq.1_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_5_at_SLC22A4_5end | |||
|id=chr5:131631106..131631118,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.41e-40!42;CL:0000860!2.41e-36!45;CL:0000766!8.40e-35!76;CL:0000763!1.64e-28!112;CL:0000049!1.64e-28!112;CL:0002194!1.70e-28!63;CL:0000576!1.70e-28!63;CL:0000040!1.70e-28!63;CL:0000559!1.70e-28!63;CL:0000839!3.69e-28!70;CL:0002009!4.01e-27!65;CL:0000557!1.41e-24!71;CL:0000037!4.86e-16!172;CL:0000566!4.86e-16!172;CL:0000738!1.39e-15!140;CL:0002032!1.28e-14!165;CL:0000837!1.28e-14!165;CL:0000988!5.46e-14!182;CL:0000048!8.22e-14!430;CL:0000723!3.97e-13!436;CL:0000034!8.64e-13!444;CL:0002087!3.20e-12!119;CL:0000094!2.69e-11!8;CL:0000134!2.79e-11!358;CL:0002031!4.93e-11!124;CL:0002320!1.63e-10!365;CL:0000219!2.86e-09!390;CL:0000081!1.46e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-93;33!CL:0002057;1.65e-93;33!CL:0000473;6.92e-65;39!CL:0000234;6.92e-65;39!CL:0000576;4.51e-51;48!CL:0000766;5.36e-37;69!CL:0000094;1.00e-26;8!CL:0000081;4.98e-19;11!CL:0000763;1.60e-18;100!CL:0002087;8.38e-12;104!CL:0000775;1.86e-11;3!CL:0000767;1.58e-10;3!CL:0000738;3.22e-10;136!CL:0000771;3.37e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.04e-95,42;CL:0002057,2.04e-95,42;CL:0000473,2.77e-82,48;CL:0000234,2.77e-82,48;CL:0000766,8.03e-80,72;CL:0002194,6.70e-64,59;CL:0000576,6.70e-64,59;CL:0000040,6.70e-64,59;CL:0000559,6.70e-64,59;CL:0002009,1.58e-61,61;CL:0000839,1.53e-59,66;CL:0000557,2.98e-55,67;CL:0000763,8.80e-55,108;CL:0000049,8.80e-55,108;CL:0000738,2.69e-39,136;CL:0002032,3.81e-33,161;CL:0000837,3.81e-33,161;CL:0000037,6.26e-33,168;CL:0000988,1.10e-30,177;CL:0002087,2.93e-30,115;CL:0002031,1.24e-28,120;CL:0000094,8.10e-27,8;CL:0000081,4.27e-19,11;CL:0000775,1.74e-11,3;CL:0000134,3.36e-11,354;CL:0002320,9.19e-11,361;CL:0000767,1.43e-10,3;CL:0000219,3.13e-09,386;CL:0000048,3.66e-09,427;CL:0000034,4.08e-09,441;CL:0000723,7.14e-09,433;CL:0000771,3.20e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-68;42!CL:0000049;4.65e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.40e-29!112;UBERON:0002390!7.23e-29!102;UBERON:0003061!7.23e-29!102;UBERON:0003081!2.33e-21!216;UBERON:0002371!4.37e-21!80;UBERON:0001474!1.63e-18!86;UBERON:0002405!9.91e-18!115;UBERON:0004765!1.46e-16!101;UBERON:0001434!1.46e-16!101;UBERON:0002204!1.88e-15!167;UBERON:0000178!6.11e-10!15;UBERON:0000179!6.11e-10!15;UBERON:0000463!6.11e-10!15;UBERON:0002384!6.59e-10!375;UBERON:0000926!6.70e-08!448;UBERON:0004120!6.70e-08!448;UBERON:0006603!6.70e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.04e-12;15!UBERON:0000179;9.04e-12;15!UBERON:0000463;9.04e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.51e-54,98;UBERON:0003061,2.51e-54,98;UBERON:0002193,9.46e-51,108;UBERON:0002371,1.13e-47,76;UBERON:0001474,1.55e-43,82;UBERON:0002405,1.39e-39,93;UBERON:0004765,7.20e-39,90;UBERON:0001434,4.43e-34,100;UBERON:0003081,3.67e-27,203;UBERON:0002204,3.89e-19,167;UBERON:0000926,2.57e-14,315;UBERON:0004120,2.57e-14,315;UBERON:0006603,2.57e-14,315;UBERON:0000178,8.50e-12,15;UBERON:0000179,8.50e-12,15;UBERON:0000463,8.50e-12,15;UBERON:0002384,3.61e-10,371 | |||
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|short_description=p5@SLC22A4 | |||
}} |
Revision as of 13:04, 13 September 2013
Short description: | p5@SLC22A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC22A4_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000491257, uc010jdq.1_5end |
EntrezGene: | SLC22A4 |
HGNC: | 10968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.51e-54 | 98 |
blood island | 2.51e-54 | 98 |
hemolymphoid system | 9.46e-51 | 108 |
bone marrow | 1.13e-47 | 76 |
bone element | 1.55e-43 | 82 |
immune system | 1.39e-39 | 93 |
skeletal element | 7.20e-39 | 90 |
skeletal system | 4.43e-34 | 100 |
lateral plate mesoderm | 3.67e-27 | 203 |
musculoskeletal system | 3.89e-19 | 167 |
mesoderm | 2.57e-14 | 315 |
mesoderm-derived structure | 2.57e-14 | 315 |
presumptive mesoderm | 2.57e-14 | 315 |
blood | 8.50e-12 | 15 |
haemolymphatic fluid | 8.50e-12 | 15 |
organism substance | 8.50e-12 | 15 |
connective tissue | 3.61e-10 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.