FFCP PHASE1:Mm9::chr16:43508231..43508271,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=56490|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000162745_5end|description=CAGE_peak_21_at_Zbtb20_5end|id=chr16:43508231..43508271,+|ontology_enrichment_celltype=CL:0000221!2.84e-07!44;CL:0000133!2.84e-07!44|ontology_enrichment_celltype_v019_2=CL:0002608,9.94e-08,3;CL:0002453,1.88e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.22e-13!63;UBERON:0001017!9.72e-13!73;UBERON:0005743!9.72e-13!73;UBERON:0004121!3.72e-12!102;UBERON:0000924!3.72e-12!102;UBERON:0006601!3.72e-12!102;UBERON:0000073!5.83e-12!75;UBERON:0001016!5.83e-12!75;UBERON:0000955!6.06e-11!50;UBERON:0006238!6.06e-11!50;UBERON:0002616!2.41e-10!49;UBERON:0001049!2.80e-10!52;UBERON:0005068!2.80e-10!52;UBERON:0006241!2.80e-10!52;UBERON:0007135!2.80e-10!52;UBERON:0007811!2.82e-10!86;UBERON:0007023!7.98e-09!51;UBERON:0000153!8.43e-09!94;UBERON:0002020!8.95e-09!34;UBERON:0002346!1.03e-07!71;UBERON:0003075!1.03e-07!71;UBERON:0007284!1.03e-07!71;UBERON:0002791!1.13e-07!29;UBERON:0003528!1.13e-07!29;UBERON:0001893!1.13e-07!29;UBERON:0003056!2.40e-07!49;UBERON:0001954!4.20e-07!7;UBERON:0003022!4.20e-07!7;UBERON:0002421!4.20e-07!7;UBERON:0000349!4.20e-07!7;UBERON:0002600!4.20e-07!7;UBERON:0003080!4.28e-07!40;UBERON:0002780!6.78e-07!39;UBERON:0001890!6.78e-07!39;UBERON:0006240!6.78e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.01e-16,7;UBERON:0003022,1.01e-16,7;UBERON:0002421,1.01e-16,7;UBERON:0000349,1.01e-16,7;UBERON:0002600,1.01e-16,7;UBERON:0004175,4.30e-13,9;UBERON:0000474,3.05e-10,9;UBERON:0007023,1.81e-09,51;UBERON:0000058,1.06e-08,7;UBERON:0003975,1.29e-08,5;UBERON:0003100,3.08e-08,11;UBERON:0003134,4.56e-08,8;UBERON:0002619,5.02e-08,17;UBERON:0005156,5.74e-08,26;UBERON:0000990,5.74e-08,26;UBERON:0004121,9.18e-08,95;UBERON:0000924,9.18e-08,95;UBERON:0006601,9.18e-08,95;UBERON:0000955,2.58e-07,47;UBERON:0006238,2.58e-07,47;UBERON:0003056,4.74e-07,49;UBERON:0001017,8.25e-07,73|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,1.26184866143295,1.50825876966313,0.84877930359606,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,3.92445281484804,1.09843091367236,2.72201858703997,0.979904951377538,0,0.503347818173209,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,1.92109152660777,0,0.270011876663381,0,0.285650984403804,0.220868540951614,1.22490799214954,1.24599112323707,2.75765635983006,1.10115880999389,0.893811366596314,0.921639199537461,0.263772575460388,0.0914876436024097,0.52091337055676,0.558365998002762,0,0.916789486660861,0.589257170947335,0.996601765593721,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53518155598025,0,0,0,0,0,0,0.5709193985953,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,2.28750301409313,2.1361239859187,0.695297280769106,0.767146371990992,0.62336413367868,1.46017136760982,0,1.24406970610093,3.79084137650512,8.62811609134543,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,5.46753866266731,3.70456604565424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0.827810238914197,0.481651769963376,0.234423373184406,0,0,0,0,0,0.477937595905104,0.891194696329576,0.566153061577665,0,0,0,1.28528526568723,2.83880170416537,0,0.325773918707152,10.5580878702423,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,2.04263763452273,0,0,0,0,0.178368817602071,0,0,1.64270195644597,0.42366414172764,1.10264199027481,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0.512612642393558,0,0,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,3.10669656543463,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0,0.772758376128762,2.25218970541418,7.3260649706906,2.57242054894879,1.50471631210609,1.12950368523413,0.460325236507177,0,0.343706364687375,0,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.468207537349412,0.384150914429216,0.287177344778066,0,0.695305955669133,0.578727661391115,0.824171801606613,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.474540072496697,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p21@Zbtb20}} | ||
|EntrezGene=56490 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000162745_5end | |||
|description=CAGE_peak_21_at_Zbtb20_5end | |||
|id=chr16:43508231..43508271,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.84e-07!44;CL:0000133!2.84e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,9.94e-08,3;CL:0002453,1.88e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.22e-13!63;UBERON:0001017!9.72e-13!73;UBERON:0005743!9.72e-13!73;UBERON:0004121!3.72e-12!102;UBERON:0000924!3.72e-12!102;UBERON:0006601!3.72e-12!102;UBERON:0000073!5.83e-12!75;UBERON:0001016!5.83e-12!75;UBERON:0000955!6.06e-11!50;UBERON:0006238!6.06e-11!50;UBERON:0002616!2.41e-10!49;UBERON:0001049!2.80e-10!52;UBERON:0005068!2.80e-10!52;UBERON:0006241!2.80e-10!52;UBERON:0007135!2.80e-10!52;UBERON:0007811!2.82e-10!86;UBERON:0007023!7.98e-09!51;UBERON:0000153!8.43e-09!94;UBERON:0002020!8.95e-09!34;UBERON:0002346!1.03e-07!71;UBERON:0003075!1.03e-07!71;UBERON:0007284!1.03e-07!71;UBERON:0002791!1.13e-07!29;UBERON:0003528!1.13e-07!29;UBERON:0001893!1.13e-07!29;UBERON:0003056!2.40e-07!49;UBERON:0001954!4.20e-07!7;UBERON:0003022!4.20e-07!7;UBERON:0002421!4.20e-07!7;UBERON:0000349!4.20e-07!7;UBERON:0002600!4.20e-07!7;UBERON:0003080!4.28e-07!40;UBERON:0002780!6.78e-07!39;UBERON:0001890!6.78e-07!39;UBERON:0006240!6.78e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.01e-16,7;UBERON:0003022,1.01e-16,7;UBERON:0002421,1.01e-16,7;UBERON:0000349,1.01e-16,7;UBERON:0002600,1.01e-16,7;UBERON:0004175,4.30e-13,9;UBERON:0000474,3.05e-10,9;UBERON:0007023,1.81e-09,51;UBERON:0000058,1.06e-08,7;UBERON:0003975,1.29e-08,5;UBERON:0003100,3.08e-08,11;UBERON:0003134,4.56e-08,8;UBERON:0002619,5.02e-08,17;UBERON:0005156,5.74e-08,26;UBERON:0000990,5.74e-08,26;UBERON:0004121,9.18e-08,95;UBERON:0000924,9.18e-08,95;UBERON:0006601,9.18e-08,95;UBERON:0000955,2.58e-07,47;UBERON:0006238,2.58e-07,47;UBERON:0003056,4.74e-07,49;UBERON:0001017,8.25e-07,73 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0.202475267389826,0,1.26184866143295,1.50825876966313,0.84877930359606,1.36069264241712,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,3.92445281484804,1.09843091367236,2.72201858703997,0.979904951377538,0,0.503347818173209,0,0,0,0,0,0.202316460859598,0,0,0.338844532069132,0,0,0,0,1.19840044207362,1.92109152660777,0,0.270011876663381,0,0.285650984403804,0.220868540951614,1.22490799214954,1.24599112323707,2.75765635983006,1.10115880999389,0.893811366596314,0.921639199537461,0.263772575460388,0.0914876436024097,0.52091337055676,0.558365998002762,0,0.916789486660861,0.589257170947335,0.996601765593721,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53518155598025,0,0,0,0,0,0,0.5709193985953,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.292780797011547,0.83778682725382,0,0,0,0,0.149790639404823,2.28750301409313,2.1361239859187,0.695297280769106,0.767146371990992,0.62336413367868,1.46017136760982,0,1.24406970610093,3.79084137650512,8.62811609134543,0,0,0,0,0.136072998302656,0.12811372028485,0.0937017245597288,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0.146199987425332,0,0.134206418760372,5.46753866266731,3.70456604565424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0.470996183524124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,0,0,0,0.827810238914197,0.481651769963376,0.234423373184406,0,0,0,0,0,0.477937595905104,0.891194696329576,0.566153061577665,0,0,0,1.28528526568723,2.83880170416537,0,0.325773918707152,10.5580878702423,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,2.04263763452273,0,0,0,0,0.178368817602071,0,0,1.64270195644597,0.42366414172764,1.10264199027481,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.370850604021019,0.512612642393558,0,0,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,3.10669656543463,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.906921534460845,0,0,0,0.772758376128762,2.25218970541418,7.3260649706906,2.57242054894879,1.50471631210609,1.12950368523413,0.460325236507177,0,0.343706364687375,0,0,0,0.900642406448441,0.453142408984205,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0,0.468207537349412,0.384150914429216,0.287177344778066,0,0.695305955669133,0.578727661391115,0.824171801606613,0.441596760403192,0.685738504770831,0.177475806159338,0.238436189947321,0,0.376437521661322,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0.474540072496697,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p21@Zbtb20 | |||
}} |
Revision as of 12:42, 13 September 2013
Short description: | p21@Zbtb20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_Zbtb20_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000162745_5end |
EntrezGene: | Zbtb20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 9.94e-08 | 3 |
oligodendrocyte precursor cell | 1.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.01e-16 | 7 |
lobe parts of cerebral cortex | 1.01e-16 | 7 |
hippocampal formation | 1.01e-16 | 7 |
limbic system | 1.01e-16 | 7 |
limbic lobe | 1.01e-16 | 7 |
internal genitalia | 4.30e-13 | 9 |
female reproductive system | 3.05e-10 | 9 |
adult organism | 1.81e-09 | 51 |
duct | 1.06e-08 | 7 |
internal female genitalia | 1.29e-08 | 5 |
female organism | 3.08e-08 | 11 |
female reproductive organ | 4.56e-08 | 8 |
regional part of cerebral cortex | 5.02e-08 | 17 |
reproductive structure | 5.74e-08 | 26 |
reproductive system | 5.74e-08 | 26 |
ectoderm-derived structure | 9.18e-08 | 95 |
ectoderm | 9.18e-08 | 95 |
presumptive ectoderm | 9.18e-08 | 95 |
brain | 2.58e-07 | 47 |
future brain | 2.58e-07 | 47 |
pre-chordal neural plate | 4.74e-07 | 49 |
central nervous system | 8.25e-07 | 73 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.