FFCP PHASE1:Mm9::chr16:38713504..38713520,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=12549|HGNC=|MCL_coexpression_id=45|UniProt=A6X8Z5|association_with_transcript=-117bp_to_ENSMUST00000023487_5end|description=CAGE_peak_11_at_Arhgap31_5end|id=chr16:38713504..38713520,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.35e-22!18;UBERON:0000948!1.35e-22!18;UBERON:0005498!1.35e-22!18;UBERON:0004140!1.35e-22!18;UBERON:0009881!1.35e-22!18;UBERON:0004141!1.35e-22!18;UBERON:0003084!1.35e-22!18;UBERON:0007005!1.35e-22!18;UBERON:0004139!1.35e-22!18;UBERON:0004291!1.35e-22!18;UBERON:0004535!9.33e-18!23;UBERON:0001009!9.33e-18!23;UBERON:0004872!7.89e-13!33;UBERON:0002048!1.69e-09!14;UBERON:0000117!1.69e-09!14;UBERON:0000171!1.69e-09!14;UBERON:0000170!1.69e-09!14;UBERON:0005597!1.69e-09!14;UBERON:0000118!1.69e-09!14;UBERON:0003103!2.79e-07!43;UBERON:0005153!2.94e-07!17;UBERON:0005178!2.94e-07!17;UBERON:0005181!2.94e-07!17;UBERON:0002224!2.94e-07!17;UBERON:0000915!2.94e-07!17;UBERON:0008947!2.94e-07!17;UBERON:0003258!2.94e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.63e-72,18;UBERON:0000948,1.63e-72,18;UBERON:0005498,1.63e-72,18;UBERON:0004140,1.63e-72,18;UBERON:0009881,1.63e-72,18;UBERON:0004141,1.63e-72,18;UBERON:0003084,1.63e-72,18;UBERON:0007005,1.63e-72,18;UBERON:0004139,1.63e-72,18;UBERON:0004291,1.63e-72,18;UBERON:0004535,2.23e-56,23;UBERON:0001009,2.23e-56,23;UBERON:0004872,9.42e-39,33;UBERON:0003103,2.63e-29,43;UBERON:0003914,1.19e-26,47;UBERON:0003081,1.82e-13,87;UBERON:0010314,1.28e-12,92;UBERON:0000025,9.16e-10,114;UBERON:0000926,3.64e-09,120;UBERON:0004120,3.64e-09,120;UBERON:0006603,3.64e-09,120;UBERON:0004111,5.60e-09,122;UBERON:0001048,5.69e-08,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.136072998302656,0.384341160854549,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,6.00664740352955,4.92504725960302,4.8616756594474,8.28606574548236,7.87056926989615,9.41029388613007,9.53389173476672,8.31647544338819,7.00592054203017,3.45575684818309,1.80584210487005,1.29710095273369,1.60819986167866,1.75640092232841,1.34206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0.234690248288502,0.837531287209079,0.714130922658041,0.780534591431195,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0|short_description=p11@Arhgap31}} | ||
|EntrezGene=12549 | |||
|HGNC= | |||
|MCL_coexpression_id=45 | |||
|UniProt=A6X8Z5 | |||
|association_with_transcript=-117bp_to_ENSMUST00000023487_5end | |||
|description=CAGE_peak_11_at_Arhgap31_5end | |||
|id=chr16:38713504..38713520,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.35e-22!18;UBERON:0000948!1.35e-22!18;UBERON:0005498!1.35e-22!18;UBERON:0004140!1.35e-22!18;UBERON:0009881!1.35e-22!18;UBERON:0004141!1.35e-22!18;UBERON:0003084!1.35e-22!18;UBERON:0007005!1.35e-22!18;UBERON:0004139!1.35e-22!18;UBERON:0004291!1.35e-22!18;UBERON:0004535!9.33e-18!23;UBERON:0001009!9.33e-18!23;UBERON:0004872!7.89e-13!33;UBERON:0002048!1.69e-09!14;UBERON:0000117!1.69e-09!14;UBERON:0000171!1.69e-09!14;UBERON:0000170!1.69e-09!14;UBERON:0005597!1.69e-09!14;UBERON:0000118!1.69e-09!14;UBERON:0003103!2.79e-07!43;UBERON:0005153!2.94e-07!17;UBERON:0005178!2.94e-07!17;UBERON:0005181!2.94e-07!17;UBERON:0002224!2.94e-07!17;UBERON:0000915!2.94e-07!17;UBERON:0008947!2.94e-07!17;UBERON:0003258!2.94e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.63e-72,18;UBERON:0000948,1.63e-72,18;UBERON:0005498,1.63e-72,18;UBERON:0004140,1.63e-72,18;UBERON:0009881,1.63e-72,18;UBERON:0004141,1.63e-72,18;UBERON:0003084,1.63e-72,18;UBERON:0007005,1.63e-72,18;UBERON:0004139,1.63e-72,18;UBERON:0004291,1.63e-72,18;UBERON:0004535,2.23e-56,23;UBERON:0001009,2.23e-56,23;UBERON:0004872,9.42e-39,33;UBERON:0003103,2.63e-29,43;UBERON:0003914,1.19e-26,47;UBERON:0003081,1.82e-13,87;UBERON:0010314,1.28e-12,92;UBERON:0000025,9.16e-10,114;UBERON:0000926,3.64e-09,120;UBERON:0004120,3.64e-09,120;UBERON:0006603,3.64e-09,120;UBERON:0004111,5.60e-09,122;UBERON:0001048,5.69e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0.219686182734472,0,0.279972843250725,0,0,0,0,0.257259436035947,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0.279182999001381,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0,0.136072998302656,0.384341160854549,0.374806898238915,0,0,0,0,0,0,0,0,0,0,0,0,6.00664740352955,4.92504725960302,4.8616756594474,8.28606574548236,7.87056926989615,9.41029388613007,9.53389173476672,8.31647544338819,7.00592054203017,3.45575684818309,1.80584210487005,1.29710095273369,1.60819986167866,1.75640092232841,1.34206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0.234690248288502,0.837531287209079,0.714130922658041,0.780534591431195,0.157635144106191,0,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.177475806159338,0,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p11@Arhgap31 | |||
}} |
Revision as of 12:38, 13 September 2013
Short description: | p11@Arhgap31 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Arhgap31_5end |
Coexpression cluster: | MCL_coexpression_mm9:45 |
Association with transcript: | -117bp_to_ENSMUST00000023487_5end |
EntrezGene: | Arhgap31 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.63e-72 | 18 |
heart | 1.63e-72 | 18 |
primitive heart tube | 1.63e-72 | 18 |
primary heart field | 1.63e-72 | 18 |
anterior lateral plate mesoderm | 1.63e-72 | 18 |
heart tube | 1.63e-72 | 18 |
heart primordium | 1.63e-72 | 18 |
cardiac mesoderm | 1.63e-72 | 18 |
cardiogenic plate | 1.63e-72 | 18 |
heart rudiment | 1.63e-72 | 18 |
cardiovascular system | 2.23e-56 | 23 |
circulatory system | 2.23e-56 | 23 |
splanchnic layer of lateral plate mesoderm | 9.42e-39 | 33 |
compound organ | 2.63e-29 | 43 |
epithelial tube | 1.19e-26 | 47 |
lateral plate mesoderm | 1.82e-13 | 87 |
structure with developmental contribution from neural crest | 1.28e-12 | 92 |
tube | 9.16e-10 | 114 |
mesoderm | 3.64e-09 | 120 |
mesoderm-derived structure | 3.64e-09 | 120 |
presumptive mesoderm | 3.64e-09 | 120 |
anatomical conduit | 5.60e-09 | 122 |
primordium | 5.69e-08 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.