FFCP PHASE1:Mm9::chr16:32550384..32550395,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1691|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:32550384..32550395,+|id=chr16:32550384..32550395,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,5.41e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.32e-23,3;DOID:4045,9.32e-23,3;DOID:0050686,1.04e-11,6|ontology_enrichment_uberon=UBERON:0002529!2.89e-08!6;UBERON:0007823!3.17e-07!5;UBERON:0005418!3.38e-07!5;UBERON:0002472!3.38e-07!5;UBERON:0008784!3.38e-07!5;UBERON:0006058!3.38e-07!5;UBERON:0004709!3.38e-07!5;UBERON:0005420!3.38e-07!5;UBERON:0006057!3.38e-07!5;UBERON:0000978!3.38e-07!5;UBERON:0002103!3.38e-07!5;UBERON:0000376!3.38e-07!5;UBERON:0000154!3.38e-07!5;UBERON:0005730!3.38e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.41e-08,9;UBERON:0002036,5.41e-08,9;UBERON:0002385,5.41e-08,9;UBERON:0000486,5.41e-08,9;UBERON:0007503,5.41e-08,9;UBERON:0001015,5.41e-08,9;UBERON:0002329,5.41e-08,9;UBERON:0003082,5.41e-08,9;UBERON:0003059,5.41e-08,9;UBERON:0007282,5.41e-08,9;UBERON:0004290,5.41e-08,9;UBERON:0009618,5.41e-08,9;UBERON:0000383,3.03e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.411343300817216,0,0,24.3262830442169,54.3295561408986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4601508901097,24.2213956802378,43.4524707498253,45.8820560664191,44.397956522299,41.7538903606792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,4.42305275974937,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,1.43778149407104,0,0.381210681219194,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.19609616558497,0.412773735926445,0,0.941842285023455,0,0,0.169978429993855,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0.198681354781265,0.360586348559907,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0.309873682371932,0,0,0.467863216890817,0,0,0,0|short_description=p@chr16:32550384..32550395,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1691 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:32550384..32550395,+ | |||
|id=chr16:32550384..32550395,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,5.41e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.32e-23,3;DOID:4045,9.32e-23,3;DOID:0050686,1.04e-11,6 | |||
|ontology_enrichment_uberon=UBERON:0002529!2.89e-08!6;UBERON:0007823!3.17e-07!5;UBERON:0005418!3.38e-07!5;UBERON:0002472!3.38e-07!5;UBERON:0008784!3.38e-07!5;UBERON:0006058!3.38e-07!5;UBERON:0004709!3.38e-07!5;UBERON:0005420!3.38e-07!5;UBERON:0006057!3.38e-07!5;UBERON:0000978!3.38e-07!5;UBERON:0002103!3.38e-07!5;UBERON:0000376!3.38e-07!5;UBERON:0000154!3.38e-07!5;UBERON:0005730!3.38e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.41e-08,9;UBERON:0002036,5.41e-08,9;UBERON:0002385,5.41e-08,9;UBERON:0000486,5.41e-08,9;UBERON:0007503,5.41e-08,9;UBERON:0001015,5.41e-08,9;UBERON:0002329,5.41e-08,9;UBERON:0003082,5.41e-08,9;UBERON:0003059,5.41e-08,9;UBERON:0007282,5.41e-08,9;UBERON:0004290,5.41e-08,9;UBERON:0009618,5.41e-08,9;UBERON:0000383,3.03e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.411343300817216,0,0,24.3262830442169,54.3295561408986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.4601508901097,24.2213956802378,43.4524707498253,45.8820560664191,44.397956522299,41.7538903606792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0.230615497256059,0,0,0,0.247194967734374,0,4.42305275974937,0.161766849947409,0.220841518460394,0.969750506270444,0,0,0,0,1.43778149407104,0,0.381210681219194,0,0,0,0,0,0,0,0,1.24406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0.0603129249281559,0,0,0.291480836629851,0,1.19609616558497,0.412773735926445,0,0.941842285023455,0,0,0.169978429993855,0.419854356970974,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.202725215290164,0,0.25984164595559,0,0.198681354781265,0.360586348559907,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0,0,0,0.135804113845862,0.561142271657738,0,0,0,0.309873682371932,0,0,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr16:32550384..32550395,+ | |||
}} |
Revision as of 12:27, 13 September 2013
Short description: | p@chr16:32550384..32550395, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:32550384..32550395, + |
Coexpression cluster: | MCL_coexpression_mm9:1691 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 5.41e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 5.41e-08 | 9 |
striated muscle tissue | 5.41e-08 | 9 |
muscle tissue | 5.41e-08 | 9 |
multilaminar epithelium | 5.41e-08 | 9 |
epithelial vesicle | 5.41e-08 | 9 |
musculature | 5.41e-08 | 9 |
somite | 5.41e-08 | 9 |
myotome | 5.41e-08 | 9 |
presomitic mesoderm | 5.41e-08 | 9 |
presumptive segmental plate | 5.41e-08 | 9 |
dermomyotome | 5.41e-08 | 9 |
trunk paraxial mesoderm | 5.41e-08 | 9 |
musculature of body | 3.03e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.32e-23 | 3 |
muscle cancer | 9.32e-23 | 3 |
organ system cancer | 1.04e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.