FFCP PHASE1:Hg19::chr4:87857538..87857549,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4299|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7135|TSSclassifier=S|UniProt=D6RIZ5|association_with_transcript=-12bp_to_ENST00000511442,uc003hqi.1_5end|coexpression_cluster_id=C4438|description=CAGE_peak_19_at_AFF1_5end|id=chr4:87857538..87857549,+|ontology_enrichment_celltype=CL:0000037!1.26e-15!172;CL:0000566!1.26e-15!172;CL:0002032!2.20e-15!165;CL:0000837!2.20e-15!165;CL:0000988!6.35e-13!182;CL:0000763!3.21e-10!112;CL:0000049!3.21e-10!112;CL:0000738!5.34e-10!140;CL:0002031!2.43e-09!124;CL:0002087!8.74e-08!119;CL:0000945!3.13e-07!24;CL:0000826!3.13e-07!24|ontology_enrichment_celltype_v019=CL:0000945;4.67e-11;24!CL:0000039;8.09e-08;7!CL:0000586;8.09e-08;7|ontology_enrichment_celltype_v019_2=CL:0000945,3.94e-11,24;CL:0000826,3.94e-11,24;CL:0000037,2.46e-09,168;CL:0002032,3.06e-09,161;CL:0000837,3.06e-09,161;CL:0000988,1.70e-08,177;CL:0000039,7.69e-08,7;CL:0000586,7.69e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!6.48e-12!51;DOID:0060083!6.48e-12!51;DOID:162!5.61e-11!235;DOID:14566!8.36e-11!239;DOID:1240!1.87e-10!39;DOID:8692!8.21e-09!31;DOID:305!2.67e-08!106|ontology_enrichment_disease_v019=DOID:8692;3.36e-11;31!DOID:1240;4.91e-08;39!DOID:0060058;1.59e-07;10!DOID:2531;1.74e-07;51!DOID:0060083;1.74e-07;51|ontology_enrichment_disease_v019_2=DOID:2531,5.70e-13,51;DOID:0060083,5.70e-13,51;DOID:8692,1.29e-11,31;DOID:1240,2.99e-10,39;DOID:0060058,2.94e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000473;7.89e-07;8!UBERON:0001255;8.31e-07;2!UBERON:0001556;8.31e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.56e-07,8|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,2.21598876669059,1.39571002064908,1.81034797021462,0.393364276848904,0,0.464448369948228,0,0,0,0.542270404062111,3.2698923472107,0,0,0.200544447470142,0,0.447830948479849,0.647787332037959,0.257575567634187,0.581592955118259,0,0.485168122375632,0.464858073811369,0.411167888021826,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0,1.09162460023138,0.224723484445085,0,0,0.639337125799041,0,0.997318288108159,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0,1.75996244461323,0,0,0.426730222566507,0.800791974072025,0,0,0,0,0.587237189370939,1.14681968437569,0,1.12101712596307,0.526768169550154,0.393419540227666,0,0.205601498999509,0,0.651844533267181,1.4203434172042,0,0.334231370655521,0.294605907474837,0.443067789167242,1.35401931882508,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0.324547393654683,1.21890816109487,0.398873881556595,0.238490624305342,0,1.11437250398869,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0.609868530647977,0.530119073285941,1.04574548582567,0.829288440122964,0.756962552626885,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.220587945464788,0.435758888184812,0.237270619111097,0.539325232640658,0.784885860501384,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.335964256397719,0.283550194484773,0.0895585227028483,0.290633938513962,0,2.95597942737566,0.44024217006613,0.829312462163088,3.60299883542404,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0.451199612907412,0.231046011313244,0.784349769176855,0,0.422206515571503,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0.515205058238611,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.765676274967505,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.847294206991012,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0.245040215981032,0.929015875628594,0.577076851905779,0.569134746787313,0.1594262727288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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4299 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |||
|TSSclassifier=S | |||
|UniProt=D6RIZ5 | |||
|association_with_transcript=-12bp_to_ENST00000511442,uc003hqi.1_5end | |||
|coexpression_cluster_id=C4438 | |||
|description=CAGE_peak_19_at_AFF1_5end | |||
|id=chr4:87857538..87857549,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.26e-15!172;CL:0000566!1.26e-15!172;CL:0002032!2.20e-15!165;CL:0000837!2.20e-15!165;CL:0000988!6.35e-13!182;CL:0000763!3.21e-10!112;CL:0000049!3.21e-10!112;CL:0000738!5.34e-10!140;CL:0002031!2.43e-09!124;CL:0002087!8.74e-08!119;CL:0000945!3.13e-07!24;CL:0000826!3.13e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.67e-11;24!CL:0000039;8.09e-08;7!CL:0000586;8.09e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.94e-11,24;CL:0000826,3.94e-11,24;CL:0000037,2.46e-09,168;CL:0002032,3.06e-09,161;CL:0000837,3.06e-09,161;CL:0000988,1.70e-08,177;CL:0000039,7.69e-08,7;CL:0000586,7.69e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!6.48e-12!51;DOID:0060083!6.48e-12!51;DOID:162!5.61e-11!235;DOID:14566!8.36e-11!239;DOID:1240!1.87e-10!39;DOID:8692!8.21e-09!31;DOID:305!2.67e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.36e-11;31!DOID:1240;4.91e-08;39!DOID:0060058;1.59e-07;10!DOID:2531;1.74e-07;51!DOID:0060083;1.74e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.70e-13,51;DOID:0060083,5.70e-13,51;DOID:8692,1.29e-11,31;DOID:1240,2.99e-10,39;DOID:0060058,2.94e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.89e-07;8!UBERON:0001255;8.31e-07;2!UBERON:0001556;8.31e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.56e-07,8 | |||
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| |||
|short_description=p19@AFF1 | |||
}} |
Revision as of 12:10, 13 September 2013
Short description: | p19@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_AFF1_5end |
Coexpression cluster: | C4438_Mast_placenta_chorionic_mesenchymal_chronic_testicular_mesothelioma |
Association with transcript: | -12bp_to_ENST00000511442, uc003hqi.1_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | D6RIZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.94e-11 | 24 |
pro-B cell | 3.94e-11 | 24 |
hematopoietic stem cell | 2.46e-09 | 168 |
hematopoietic oligopotent progenitor cell | 3.06e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.06e-09 | 161 |
hematopoietic cell | 1.70e-08 | 177 |
germ line cell | 7.69e-08 | 7 |
germ cell | 7.69e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 7.56e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.70e-13 | 51 |
immune system cancer | 5.70e-13 | 51 |
myeloid leukemia | 1.29e-11 | 31 |
leukemia | 2.99e-10 | 39 |
lymphoma | 2.94e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.