FFCP PHASE1:Hg19::chr4:84205905..84205959,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27235|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25223|TSSclassifier=S|UniProt=E2QRG7,E7EPM7|association_with_transcript=0bp_to_ENST00000311461,ENST00000503391_5end|description=CAGE_peak_1_at_COQ2_5end|id=chr4:84205905..84205959,-|ontology_enrichment_celltype=CL:0000012!4.59e-17!682;CL:0000548!1.97e-16!679;CL:0000004!1.97e-16!679;CL:0000255!1.97e-16!679;CL:0002194!3.74e-16!63;CL:0000576!3.74e-16!63;CL:0000040!3.74e-16!63;CL:0000559!3.74e-16!63;CL:0002009!4.43e-15!65;CL:0002057!1.93e-14!42;CL:0000763!3.78e-14!112;CL:0000049!3.78e-14!112;CL:0000766!4.61e-14!76;CL:0000860!7.36e-14!45;CL:0000063!8.67e-14!578;CL:0000839!2.16e-13!70;CL:0000144!5.14e-13!625;CL:0002371!1.88e-12!591;CL:0000557!2.84e-12!71;CL:0000003!6.92e-11!722|ontology_enrichment_celltype_v019=CL:0000576;1.51e-11;48!CL:0000473;1.94e-10;39!CL:0000234;1.94e-10;39!CL:0000860;8.95e-10;33!CL:0002057;8.95e-10;33!CL:0000766;2.14e-08;69!CL:0000763;5.72e-07;100|ontology_enrichment_celltype_v019_2=CL:0002194,1.20e-17,59;CL:0000576,1.20e-17,59;CL:0000040,1.20e-17,59;CL:0000559,1.20e-17,59;CL:0000473,9.63e-17,48;CL:0000234,9.63e-17,48;CL:0002009,1.90e-16,61;CL:0000766,3.47e-15,72;CL:0000763,5.78e-15,108;CL:0000049,5.78e-15,108;CL:0000839,1.51e-14,66;CL:0000860,1.93e-14,42;CL:0002057,1.93e-14,42;CL:0000557,2.49e-13,67|ontology_enrichment_development_v019=CL:0002057;1.69e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004765!5.51e-12!101;UBERON:0001434!5.51e-12!101;UBERON:0002371!8.25e-12!80;UBERON:0001474!7.45e-11!86;UBERON:0002405!8.90e-09!115;UBERON:0002390!3.40e-08!102;UBERON:0003061!3.40e-08!102;UBERON:0002193!1.15e-07!112;UBERON:0000926!2.85e-07!448;UBERON:0004120!2.85e-07!448;UBERON:0006603!2.85e-07!448;UBERON:0002204!7.10e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.79e-13,76;UBERON:0001434,1.27e-12,100;UBERON:0004765,6.96e-12,90;UBERON:0001474,1.15e-11,82;UBERON:0002405,1.38e-09,93;UBERON:0002390,9.41e-09,98;UBERON:0003061,9.41e-09,98;UBERON:0002193,3.71e-08,108;UBERON:0002204,5.29e-07,167|phase1_expression=24.8899379600663,34.2560838225573,24.1032031004111,29.0212565224078,26.37070457121,30.5318483435129,20.2639902534648,13.2661173419635,24.0290777943851,33.9112832372082,30.0054502228144,42.5960675653836,27.6955327139876,23.763139768329,29.1629690640566,12.101852636132,16.2727522566474,12.4152715365853,10.7345215733912,55.0351129603242,38.5561306451638,29.4647438189403,39.7868022112169,46.9479277999993,31.8878304570799,12.3025583254202,12.5613901858417,15.1911807935401,21.6350352266897,14.2016877295969,23.9964991139918,44.1322187749885,18.072355126695,30.6895828438434,41.8322883133629,19.1928463858019,46.6824698542407,32.1317336948489,32.2876560426928,22.7861414251644,40.9765317859062,40.1628145863535,45.3332999036168,51.1801800504068,34.3867108756817,43.9077150749947,39.5129362739664,32.0710952657024,30.041517976825,31.0707783707923,21.2613386419154,24.1211874486357,36.5430421580816,34.8561729135266,25.7310324529249,52.5196127323867,36.2965179576935,35.7310340267685,51.1160100259407,36.2649800595986,36.4422161705454,30.3463196171779,27.7254484094068,32.8193057910174,38.0174102603445,36.8800396049241,26.1585344578141,26.1298611867013,29.2030434315313,23.2392063834475,32.0861736395685,23.5697687032041,30.3803891943249,61.0527777441512,57.1905566905967,61.6396417794625,58.9725313519099,56.4665117084064,48.217676009124,68.1180457541584,67.2338368932925,62.8364688950341,10.5597746676794,16.9302969491261,16.011166569544,17.9226693477933,18.0178194166206,19.5415829584524,25.1197051658248,10.494591299889,28.4606484554724,19.9660644386119,20.2604810906371,25.1125524300149,19.6177997043538,39.7709968010366,18.884137930928,20.4365596629566,18.5041349099558,6.68745981562712,27.3774703972216,27.9334205383493,21.4309401248702,12.7007920849098,15.0249012812167,15.9504404100207,10.8321545506006,8.19784446244321,10.4047478047903,14.6349735097272,13.2648008537207,20.2862160014537,21.3532650953367,20.8681845909976,16.7256838087963,15.1834519214739,14.562378756873,17.1813722741315,15.6872209052092,8.91983160107471,7.1619179924206,5.70271226669025,14.3046363123884,9.59899583658138,3.74792179657038,10.4181990899367,4.92676798152628,12.7012248231581,8.55808626507223,18.2478748892327,9.75227465255847,41.5834533016254,28.0019010437331,43.7341374385325,17.5468268722561,32.7353132851462,30.2208659879418,8.27279279514481,31.9527682014549,29.490009862521,25.9990965651653,12.1810540212873,25.500670180478,34.8537376217364,14.6046327144608,17.0647142553282,17.5504507884902,10.2550968451297,9.72391348326217,11.5151825412165,20.0750031440372,28.3877416385021,32.9783476527215,16.3939303157963,25.5894656088043,27.2366861520667,21.7354765198283,9.30300333009584,9.24992282985447,12.7193832850575,24.572588343658,25.0889794887109,14.6437234528902,38.6046234363162,20.253548697044,34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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27235 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25223 | |||
|TSSclassifier=S | |||
|UniProt=E2QRG7,E7EPM7 | |||
|association_with_transcript=0bp_to_ENST00000311461,ENST00000503391_5end | |||
|description=CAGE_peak_1_at_COQ2_5end | |||
|id=chr4:84205905..84205959,- | |||
|ontology_enrichment_celltype=CL:0000012!4.59e-17!682;CL:0000548!1.97e-16!679;CL:0000004!1.97e-16!679;CL:0000255!1.97e-16!679;CL:0002194!3.74e-16!63;CL:0000576!3.74e-16!63;CL:0000040!3.74e-16!63;CL:0000559!3.74e-16!63;CL:0002009!4.43e-15!65;CL:0002057!1.93e-14!42;CL:0000763!3.78e-14!112;CL:0000049!3.78e-14!112;CL:0000766!4.61e-14!76;CL:0000860!7.36e-14!45;CL:0000063!8.67e-14!578;CL:0000839!2.16e-13!70;CL:0000144!5.14e-13!625;CL:0002371!1.88e-12!591;CL:0000557!2.84e-12!71;CL:0000003!6.92e-11!722 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.51e-11;48!CL:0000473;1.94e-10;39!CL:0000234;1.94e-10;39!CL:0000860;8.95e-10;33!CL:0002057;8.95e-10;33!CL:0000766;2.14e-08;69!CL:0000763;5.72e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.20e-17,59;CL:0000576,1.20e-17,59;CL:0000040,1.20e-17,59;CL:0000559,1.20e-17,59;CL:0000473,9.63e-17,48;CL:0000234,9.63e-17,48;CL:0002009,1.90e-16,61;CL:0000766,3.47e-15,72;CL:0000763,5.78e-15,108;CL:0000049,5.78e-15,108;CL:0000839,1.51e-14,66;CL:0000860,1.93e-14,42;CL:0002057,1.93e-14,42;CL:0000557,2.49e-13,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!5.51e-12!101;UBERON:0001434!5.51e-12!101;UBERON:0002371!8.25e-12!80;UBERON:0001474!7.45e-11!86;UBERON:0002405!8.90e-09!115;UBERON:0002390!3.40e-08!102;UBERON:0003061!3.40e-08!102;UBERON:0002193!1.15e-07!112;UBERON:0000926!2.85e-07!448;UBERON:0004120!2.85e-07!448;UBERON:0006603!2.85e-07!448;UBERON:0002204!7.10e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.79e-13,76;UBERON:0001434,1.27e-12,100;UBERON:0004765,6.96e-12,90;UBERON:0001474,1.15e-11,82;UBERON:0002405,1.38e-09,93;UBERON:0002390,9.41e-09,98;UBERON:0003061,9.41e-09,98;UBERON:0002193,3.71e-08,108;UBERON:0002204,5.29e-07,167 | |||
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| |||
|short_description=p1@COQ2 | |||
}} |
Revision as of 12:05, 13 September 2013
Short description: | p1@COQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_COQ2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311461, ENST00000503391_5end |
EntrezGene: | COQ2 |
HGNC: | 25223 |
UniProt: | E2QRG7E7EPM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.20e-17 | 59 |
monocyte | 1.20e-17 | 59 |
monoblast | 1.20e-17 | 59 |
promonocyte | 1.20e-17 | 59 |
defensive cell | 9.63e-17 | 48 |
phagocyte | 9.63e-17 | 48 |
macrophage dendritic cell progenitor | 1.90e-16 | 61 |
myeloid leukocyte | 3.47e-15 | 72 |
myeloid cell | 5.78e-15 | 108 |
common myeloid progenitor | 5.78e-15 | 108 |
myeloid lineage restricted progenitor cell | 1.51e-14 | 66 |
classical monocyte | 1.93e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.93e-14 | 42 |
granulocyte monocyte progenitor cell | 2.49e-13 | 67 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.79e-13 | 76 |
skeletal system | 1.27e-12 | 100 |
skeletal element | 6.96e-12 | 90 |
bone element | 1.15e-11 | 82 |
immune system | 1.38e-09 | 93 |
hematopoietic system | 9.41e-09 | 98 |
blood island | 9.41e-09 | 98 |
hemolymphoid system | 3.71e-08 | 108 |
musculoskeletal system | 5.29e-07 | 167 |
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