FFCP PHASE1:Mm9::chr16:11134717..11134752,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106200|HGNC=|UniProt=Q8K2W3,D6REU4|association_with_transcript=0bp_to_ENSMUST00000038424,ENSMUST00000147884_5end|description=CAGE_peak_3_at_Txndc11_5end|id=chr16:11134717..11134752,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.54e-07!102;UBERON:0000924!1.54e-07!102;UBERON:0006601!1.54e-07!102;UBERON:0002346!4.82e-07!71;UBERON:0003075!4.82e-07!71;UBERON:0007284!4.82e-07!71;UBERON:0001049!5.88e-07!52;UBERON:0005068!5.88e-07!52;UBERON:0006241!5.88e-07!52;UBERON:0007135!5.88e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.88e-07,52;UBERON:0005068,5.88e-07,52;UBERON:0006241,5.88e-07,52;UBERON:0007135,5.88e-07,52|phase1_expression=6.40595388419176,3.83872948403297,2.72999543633722,5.14189159221611,7.51343594919521,3.52546471014969,2.10251376535973,8.26389270026088,4.50523910885334,3.97909694747389,3.25314139628459,3.90883579077148,5.13602189793617,10.1407666806037,1.99865857089398,4.25198061518635,4.19737126876888,8.20201629931418,7.95263714913285,7.21462408056651,4.25216450755349,4.17021995043718,2.61199789138935,2.87986361028132,2.75291137280604,6.31655160526522,2.15380998079537,2.37018355954478,4.3705386474966,3.2763916868791,3.10422714917427,3.17515336729816,3.07532393792285,0,3.46621943701529,3.98963148860382,5.10423390655923,2.92972141515835,3.906676722619,3.66466620781659,2.94115744015507,6.14740936462601,4.36959317728038,2.51793635951155,2.12891555560981,1.83546752161682,5.47673941043627,4.79655344036982,2.41654801007919,2.52758868796568,4.75953833526233,5.75010257459886,7.3824346665404,2.90144856804538,3.02484419228218,3.60163210450326,3.43840127926508,1.54701627683233,3.64169629547276,4.7609188134483,3.1691570175309,4.74382344896785,3.55717918444456,1.7997994345628,3.9554654502679,2.8419204597844,3.29560121570245,6.14749288514487,3.94020526772215,2.02508907497536,3.15487442027073,5.99867067247988,5.52171352379034,3.79721477566358,4.69642807989358,1.83843757322004,2.20231761998777,4.72443150915195,5.22262213071228,4.61602007055678,5.6722339033494,5.2091337055676,5.58365998002762,3.93933827022176,5.04234217663473,5.59794312399969,6.26435395516053,4.47358669980721,4.31639301999149,3.6274348851257,3.47837386442013,3.44169550792555,0.679971333707751,2.15881276655127,1.29955283489534,2.24013443548668,2.24711072210803,4.26075806445144,2.85764605063156,1.7666978725517,6.05626705039726,6.41632387071589,2.54805239706646,0,1.5154372870785,3.04031838570118,0.505524445014783,1.59857431606684,1.55362730188303,5.64080128446334,6.7659277438793,7.91610243611567,6.91846491768175,5.72746034099966,5.05631440683531,6.03199638382442,4.20231445148436,3.61498392299779,7.07688441559899,6.63244084784378,4.41683036920787,1.93950101254089,3.72783522436244,7.61230072230023,5.02672096352292,3.83185582812887,2.75574786363617,2.39961092397363,3.93917703926501,4.04434726393021,7.32000964509802,5.27748278874031,5.9100268865374,5.8814555185976,4.77912502486988,5.84068547043927,6.11036183101898,3.4833951770826,3.53811861807145,3.99839526184301,3.77349284591841,5.51765050640335,3.42118046630164,2.26057226753573,3.94611695077702,3.07472928683639,4.8724896771059,5.17406741478031,4.52692785158969,2.83659120251729,3.51902248327898,5.2606975782618,5.56094498451196,4.52727816478817,4.7329891373827,5.17489093728082,1.40442637462647,1.80143534980301,3.12579849335152,5.17814431338755,5.39409937956521,3.06105504483725,3.78791576936336,4.72234156193769,3.5481435964097,5.11574678450897,5.09719462659276,3.38619492864792,5.59503489705834,3.2833492815819,3.64809642956351,3.21639972335731,2.41505126820156,3.89198614405078,6.9395683026162,6.89460902941206,3.96502539580558,2.64450566663544,4.47905326123991,3.48355007790658,3.60828891701861,4.03367049246685,3.33567065767305,4.1849637744763,5.69434873853414,3.29397909448022,5.7807098024062,2.58643413653496,3.70431765526328,3.59527763461689,4.32276099749388,3.98282546508734,3.41402221715547,3.77020091612105,4.50830942692322,4.68398054044223,3.68509725618489,4.20814919341911,4.48979413582227,5.75679577120448,4.39596437955849,3.82531208157582,1.48226313543574,2.66952169145751,3.53806191203765,4.72210436008193,3.24576194221605,5.788251834058,3.56476192493988,3.45235364940973,4.37765112292595,0.823684239564244,1.43768206527355,3.72140947668503,2.80833905803104,1.76805214562978,0.717589654087649,1.4473305640901,3.8798169934987,3.7898282354097,4.4000543639347,3.56464680127895,5.16318546234705,2.68010011906905,3.57065461329021,5.85400943573396,4.09851374676097,5.09368786192182,6.218735977642,4.26044618260919,2.59027472798843,4.19482269886384,1.50791283939272,1.08781136763742,4.42587845717133,2.75936746304733,4.65596710964597,3.6335622843583,4.09837363441689,2.52470927204373,2.52406575533005,2.73307121007647,2.80050417052639,2.15071918157297,3.34198011123591,4.24614796183249,3.64329631507405,4.9683495844923,3.95287777946523,9.3183181762324,6.24536374916382,6.41036173202119,6.18970445543589,4.45419332025846,1.32745138339963,4.61283208694465,5.44182402536552,2.82907619633847,3.2483208216885,3.3817866273832,3.6179961043551,5.81653967164009,3.56497378384721,0.316036757935816,0,2.06271086496374,6.46835250932197,4.32146625675145,3.36332577835162,5.35842587578981,5.32020700926821,5.35106452806212,9.70839221552514,7.61162372786498,6.33613611772018,7.83778662196135,1.32317038832977,3.95727007059552,4.52100394748536,4.76472106932431,5.49112782414428,6.72977688954751,3.20628920292836,4.45020724825223,4.10090113914846,4.74689796315412,3.70389054739423,5.08594833912666,3.2806614653046,5.0331198105435,4.24946074984638,4.19854356970974,3.04039942369732,7.63736494412091,4.4287039101359,2.23651413839534,3.24016022465404,2.92723614420256,3.71216358368502,3.64133735239016,4.05001933054146,3.40282724579238,3.6292192521702,6.83473244395618,7.89170114157866,6.27969493384711,4.96375471371293,7.19469396872976,6.84547064431975,7.60302564708502,5.16371850041317,7.16124116641726,6.39642000996836,5.07326653734613,3.74439008135225,3.16011120628178,2.22997736819181,4.10843828659309,3.50786222040047,2.14832034800978,3.57626438606277,4.92801343031872,5.1691334511102,3.93769154797776,4.64861520595499,3.7305688500631,3.02119430293232,4.2333210321745,4.9088298916259,2.0405734525369,4.88369097422942,4.21655126064536,6.88326927092722,4.82973985080476,3.94133198447482,4.02933573387983,4.28736758158132,4.01257683228291,6.7770221114048,3.22227665555024,9.16632821503035,6.35856774671644,5.48066015816514,3.0215755895588,7.42524750254986,4.95353323546643,8.60970577069989,7.24864436452548,1.45302286617847,4.38927360741134,4.78054096111576,2.18796045361465,2.09613162627982,3.30918315210025,2.00022055021454,3.91466608753899,5.77654577265267,6.06473308233114,5.32306529769503,3.77252682772152,3.65201879132541,3.71345883948242,3.84817642002609,2.85776214769844,3.59241410429052,3.6652751888104,5.76920261124629,3.23837624295674,2.74295401908332,4.96932257246145,5.96090474868302,4.0696996657052,4.98779716201252,5.33072029717562,3.84148743032822,2.63069711437843,3.66671107383827,3.92799590160417,5.81311588808453,5.1222330835293,3.6830793885272,3.71848418846318,3.85813221962283,5.49583271463481,5.84829021113521,5.58664740525576,4.3996316375834,3.75005412503176,4.86922454802885|short_description=p3@Txndc11}} | ||
|EntrezGene=106200 | |||
|HGNC= | |||
|UniProt=Q8K2W3,D6REU4 | |||
|association_with_transcript=0bp_to_ENSMUST00000038424,ENSMUST00000147884_5end | |||
|description=CAGE_peak_3_at_Txndc11_5end | |||
|id=chr16:11134717..11134752,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.54e-07!102;UBERON:0000924!1.54e-07!102;UBERON:0006601!1.54e-07!102;UBERON:0002346!4.82e-07!71;UBERON:0003075!4.82e-07!71;UBERON:0007284!4.82e-07!71;UBERON:0001049!5.88e-07!52;UBERON:0005068!5.88e-07!52;UBERON:0006241!5.88e-07!52;UBERON:0007135!5.88e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.88e-07,52;UBERON:0005068,5.88e-07,52;UBERON:0006241,5.88e-07,52;UBERON:0007135,5.88e-07,52 | |||
|phase1_expression=6.40595388419176,3.83872948403297,2.72999543633722,5.14189159221611,7.51343594919521,3.52546471014969,2.10251376535973,8.26389270026088,4.50523910885334,3.97909694747389,3.25314139628459,3.90883579077148,5.13602189793617,10.1407666806037,1.99865857089398,4.25198061518635,4.19737126876888,8.20201629931418,7.95263714913285,7.21462408056651,4.25216450755349,4.17021995043718,2.61199789138935,2.87986361028132,2.75291137280604,6.31655160526522,2.15380998079537,2.37018355954478,4.3705386474966,3.2763916868791,3.10422714917427,3.17515336729816,3.07532393792285,0,3.46621943701529,3.98963148860382,5.10423390655923,2.92972141515835,3.906676722619,3.66466620781659,2.94115744015507,6.14740936462601,4.36959317728038,2.51793635951155,2.12891555560981,1.83546752161682,5.47673941043627,4.79655344036982,2.41654801007919,2.52758868796568,4.75953833526233,5.75010257459886,7.3824346665404,2.90144856804538,3.02484419228218,3.60163210450326,3.43840127926508,1.54701627683233,3.64169629547276,4.7609188134483,3.1691570175309,4.74382344896785,3.55717918444456,1.7997994345628,3.9554654502679,2.8419204597844,3.29560121570245,6.14749288514487,3.94020526772215,2.02508907497536,3.15487442027073,5.99867067247988,5.52171352379034,3.79721477566358,4.69642807989358,1.83843757322004,2.20231761998777,4.72443150915195,5.22262213071228,4.61602007055678,5.6722339033494,5.2091337055676,5.58365998002762,3.93933827022176,5.04234217663473,5.59794312399969,6.26435395516053,4.47358669980721,4.31639301999149,3.6274348851257,3.47837386442013,3.44169550792555,0.679971333707751,2.15881276655127,1.29955283489534,2.24013443548668,2.24711072210803,4.26075806445144,2.85764605063156,1.7666978725517,6.05626705039726,6.41632387071589,2.54805239706646,0,1.5154372870785,3.04031838570118,0.505524445014783,1.59857431606684,1.55362730188303,5.64080128446334,6.7659277438793,7.91610243611567,6.91846491768175,5.72746034099966,5.05631440683531,6.03199638382442,4.20231445148436,3.61498392299779,7.07688441559899,6.63244084784378,4.41683036920787,1.93950101254089,3.72783522436244,7.61230072230023,5.02672096352292,3.83185582812887,2.75574786363617,2.39961092397363,3.93917703926501,4.04434726393021,7.32000964509802,5.27748278874031,5.9100268865374,5.8814555185976,4.77912502486988,5.84068547043927,6.11036183101898,3.4833951770826,3.53811861807145,3.99839526184301,3.77349284591841,5.51765050640335,3.42118046630164,2.26057226753573,3.94611695077702,3.07472928683639,4.8724896771059,5.17406741478031,4.52692785158969,2.83659120251729,3.51902248327898,5.2606975782618,5.56094498451196,4.52727816478817,4.7329891373827,5.17489093728082,1.40442637462647,1.80143534980301,3.12579849335152,5.17814431338755,5.39409937956521,3.06105504483725,3.78791576936336,4.72234156193769,3.5481435964097,5.11574678450897,5.09719462659276,3.38619492864792,5.59503489705834,3.2833492815819,3.64809642956351,3.21639972335731,2.41505126820156,3.89198614405078,6.9395683026162,6.89460902941206,3.96502539580558,2.64450566663544,4.47905326123991,3.48355007790658,3.60828891701861,4.03367049246685,3.33567065767305,4.1849637744763,5.69434873853414,3.29397909448022,5.7807098024062,2.58643413653496,3.70431765526328,3.59527763461689,4.32276099749388,3.98282546508734,3.41402221715547,3.77020091612105,4.50830942692322,4.68398054044223,3.68509725618489,4.20814919341911,4.48979413582227,5.75679577120448,4.39596437955849,3.82531208157582,1.48226313543574,2.66952169145751,3.53806191203765,4.72210436008193,3.24576194221605,5.788251834058,3.56476192493988,3.45235364940973,4.37765112292595,0.823684239564244,1.43768206527355,3.72140947668503,2.80833905803104,1.76805214562978,0.717589654087649,1.4473305640901,3.8798169934987,3.7898282354097,4.4000543639347,3.56464680127895,5.16318546234705,2.68010011906905,3.57065461329021,5.85400943573396,4.09851374676097,5.09368786192182,6.218735977642,4.26044618260919,2.59027472798843,4.19482269886384,1.50791283939272,1.08781136763742,4.42587845717133,2.75936746304733,4.65596710964597,3.6335622843583,4.09837363441689,2.52470927204373,2.52406575533005,2.73307121007647,2.80050417052639,2.15071918157297,3.34198011123591,4.24614796183249,3.64329631507405,4.9683495844923,3.95287777946523,9.3183181762324,6.24536374916382,6.41036173202119,6.18970445543589,4.45419332025846,1.32745138339963,4.61283208694465,5.44182402536552,2.82907619633847,3.2483208216885,3.3817866273832,3.6179961043551,5.81653967164009,3.56497378384721,0.316036757935816,0,2.06271086496374,6.46835250932197,4.32146625675145,3.36332577835162,5.35842587578981,5.32020700926821,5.35106452806212,9.70839221552514,7.61162372786498,6.33613611772018,7.83778662196135,1.32317038832977,3.95727007059552,4.52100394748536,4.76472106932431,5.49112782414428,6.72977688954751,3.20628920292836,4.45020724825223,4.10090113914846,4.74689796315412,3.70389054739423,5.08594833912666,3.2806614653046,5.0331198105435,4.24946074984638,4.19854356970974,3.04039942369732,7.63736494412091,4.4287039101359,2.23651413839534,3.24016022465404,2.92723614420256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| |||
|short_description=p3@Txndc11 | |||
}} | |||
Revision as of 11:57, 13 September 2013
| Short description: | p3@Txndc11 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Txndc11_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000038424, ENSMUST00000147884_5end |
| EntrezGene: | Txndc11 |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 5.88e-07 | 52 |
| neural rod | 5.88e-07 | 52 |
| future spinal cord | 5.88e-07 | 52 |
| neural keel | 5.88e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
