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FFCP PHASE1:Mm9::chr16:10545521..10545547,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=74374|HGNC=|UniProt=Q80U30,D3YVA1|association_with_transcript=19bp_to_ENSMUST00000038145,ENSMUST00000115828,ENSMUST00000150894_5end|description=CAGE_peak_3_at_Clec16a_5end|id=chr16:10545521..10545547,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!9.18e-11!94;UBERON:0007811!2.97e-10!86;UBERON:0001049!7.62e-10!52;UBERON:0005068!7.62e-10!52;UBERON:0006241!7.62e-10!52;UBERON:0007135!7.62e-10!52;UBERON:0000483!1.75e-09!181;UBERON:0001017!2.26e-09!73;UBERON:0005743!2.26e-09!73;UBERON:0000955!3.69e-09!50;UBERON:0006238!3.69e-09!50;UBERON:0002616!1.14e-08!49;UBERON:0000119!1.33e-08!183;UBERON:0000033!1.63e-08!63;UBERON:0000073!1.89e-08!75;UBERON:0001016!1.89e-08!75;UBERON:0002346!4.19e-08!71;UBERON:0003075!4.19e-08!71;UBERON:0007284!4.19e-08!71;UBERON:0004121!4.47e-08!102;UBERON:0000924!4.47e-08!102;UBERON:0006601!4.47e-08!102;UBERON:0000025!1.16e-07!114;UBERON:0004111!3.61e-07!122;UBERON:0002020!3.76e-07!34;UBERON:0000477!5.23e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.34e-11,54;UBERON:0000483,1.49e-10,174;UBERON:0010314,1.65e-10,92;UBERON:0010371,1.82e-10,73;UBERON:0002346,6.12e-10,64;UBERON:0003075,6.12e-10,64;UBERON:0007284,6.12e-10,64;UBERON:0001049,7.62e-10,52;UBERON:0005068,7.62e-10,52;UBERON:0006241,7.62e-10,52;UBERON:0007135,7.62e-10,52;UBERON:0000119,1.31e-09,176;UBERON:0004121,1.81e-09,95;UBERON:0000924,1.81e-09,95;UBERON:0006601,1.81e-09,95;UBERON:0001017,2.26e-09,73;UBERON:0001016,1.89e-08,75;UBERON:0000955,8.26e-08,47;UBERON:0006238,8.26e-08,47;UBERON:0000025,1.17e-07,114;UBERON:0002616,2.41e-07,46;UBERON:0004111,3.62e-07,122;UBERON:0002020,3.76e-07,34|phase1_expression=4.48416771893423,11.5161884520989,11.3749809847384,9.67885476181856,13.023288978605,7.89032577985882,7.47560449905682,2.7115897922731,16.6130692138967,20.5976783163354,5.99262888789267,7.73789942254763,3.76641605848653,3.84649770643589,0,2.22722794128809,2.09868563438444,3.94327706697797,6.7186072466812,5.94145512517242,7.22867966284093,3.57447424323187,4.96279599363977,3.51983330145495,3.89995777814189,5.16808767703518,5.59990595006797,8.18790684206378,1.90023419456374,3.78045194639896,3.32595765982957,5.08024538767705,5.53558308826113,0,3.17736781726402,2.32728503501889,4.28755648150975,1.25559489221072,2.3440060335714,0,2.94115744015507,1.36609096991689,0.971020706062307,3.52511090331616,4.8660926985367,7.52541683862894,1.56478268869608,4.57852828398938,5.05278220289285,5.63846707315422,2.79972843250725,4.31257693094915,5.03347818173209,7.97898356212479,7.39406358113421,0.257259436035947,1.71920063963254,2.06268836910977,10.5204559646991,5.28990979272033,12.0427966666174,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,5.39280198933128,4.61061966385865,4.66603255388149,4.45519596494579,3.78584930432488,14.568200204594,8.61387309711293,4.28717797252339,4.31304619582064,7.35375029288017,12.1127469099328,13.5348578370299,14.8998337258556,12.0016521834476,9.24025200384338,11.4600941522487,13.1216009530649,6.19038871034848,9.16789486660861,12.9636577608414,10.8202477407318,13.4207600994216,3.40767869999328,2.11600368298999,5.50742528533188,2.58127163094416,9.51959867190851,4.85732872474035,7.79731700937203,8.06448396775204,5.47733238513832,1.70430322578058,1.29893002301434,0.70667914902068,3.52108549441701,3.84979432242953,7.64415719119937,0,2.16491041011214,3.04031838570118,3.0331466700887,4.45317130904334,9.06282592765101,4.89859058913922,3.29622120855658,5.78484408793068,3.45923245884088,3.46662073271032,5.17390311397101,3.64433114856059,4.6967043869531,8.53136205827479,4.42305275974937,7.60304194752823,3.75430581382669,6.78825354389311,1.86391761218122,14.3462590535658,19.4785437336513,4.59822699375465,1.67741174308288,0.599902730993408,2.92261522268049,21.7196427136993,10.5225138648284,5.52879149296603,16.8609590586508,15.5986428971502,18.7009240103604,14.7639549391659,4.88828946481518,6.34475550111474,6.57079171927554,4.62972082950243,4.03373373184381,2.5289231487682,6.30217454318722,5.42537344208574,7.75616090325138,8.83984669965463,7.68354141389776,11.9003550539947,4.74249584452253,6.05139456537022,6.33424046990216,4.82230611340665,5.56094498451196,6.96504333044333,8.0255033199098,2.38841120182192,2.80885274925294,2.05878325691772,0,6.42089894860056,6.0976775595085,7.20248245844059,6.39210786080068,6.68998387941173,9.10175966035532,9.53389173476672,8.31647544338819,9.45799273174073,13.1647879930784,16.9092488001468,19.132239052822,18.1287984407412,16.4662586468288,14.8969124824013,7.78072809687271,4.52780294468852,8.26046957459495,7.1401652999157,3.41261200856374,3.0190767341857,3.60828891701861,3.83198696784351,4.44756087689741,4.56541502670142,4.74529061544512,3.62337700392824,2.5133520880027,3.78017296878187,3.8992817423824,4.49409704327111,2.16138049874694,2.98711909881551,3.79335801906163,3.99869794134051,1.1270773567308,6.31319116320474,6.5943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|EntrezGene=74374
|HGNC=
|UniProt=Q80U30,D3YVA1
|association_with_transcript=19bp_to_ENSMUST00000038145,ENSMUST00000115828,ENSMUST00000150894_5end
|description=CAGE_peak_3_at_Clec16a_5end
|id=chr16:10545521..10545547,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!9.18e-11!94;UBERON:0007811!2.97e-10!86;UBERON:0001049!7.62e-10!52;UBERON:0005068!7.62e-10!52;UBERON:0006241!7.62e-10!52;UBERON:0007135!7.62e-10!52;UBERON:0000483!1.75e-09!181;UBERON:0001017!2.26e-09!73;UBERON:0005743!2.26e-09!73;UBERON:0000955!3.69e-09!50;UBERON:0006238!3.69e-09!50;UBERON:0002616!1.14e-08!49;UBERON:0000119!1.33e-08!183;UBERON:0000033!1.63e-08!63;UBERON:0000073!1.89e-08!75;UBERON:0001016!1.89e-08!75;UBERON:0002346!4.19e-08!71;UBERON:0003075!4.19e-08!71;UBERON:0007284!4.19e-08!71;UBERON:0004121!4.47e-08!102;UBERON:0000924!4.47e-08!102;UBERON:0006601!4.47e-08!102;UBERON:0000025!1.16e-07!114;UBERON:0004111!3.61e-07!122;UBERON:0002020!3.76e-07!34;UBERON:0000477!5.23e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.34e-11,54;UBERON:0000483,1.49e-10,174;UBERON:0010314,1.65e-10,92;UBERON:0010371,1.82e-10,73;UBERON:0002346,6.12e-10,64;UBERON:0003075,6.12e-10,64;UBERON:0007284,6.12e-10,64;UBERON:0001049,7.62e-10,52;UBERON:0005068,7.62e-10,52;UBERON:0006241,7.62e-10,52;UBERON:0007135,7.62e-10,52;UBERON:0000119,1.31e-09,176;UBERON:0004121,1.81e-09,95;UBERON:0000924,1.81e-09,95;UBERON:0006601,1.81e-09,95;UBERON:0001017,2.26e-09,73;UBERON:0001016,1.89e-08,75;UBERON:0000955,8.26e-08,47;UBERON:0006238,8.26e-08,47;UBERON:0000025,1.17e-07,114;UBERON:0002616,2.41e-07,46;UBERON:0004111,3.62e-07,122;UBERON:0002020,3.76e-07,34
|phase1_expression=4.48416771893423,11.5161884520989,11.3749809847384,9.67885476181856,13.023288978605,7.89032577985882,7.47560449905682,2.7115897922731,16.6130692138967,20.5976783163354,5.99262888789267,7.73789942254763,3.76641605848653,3.84649770643589,0,2.22722794128809,2.09868563438444,3.94327706697797,6.7186072466812,5.94145512517242,7.22867966284093,3.57447424323187,4.96279599363977,3.51983330145495,3.89995777814189,5.16808767703518,5.59990595006797,8.18790684206378,1.90023419456374,3.78045194639896,3.32595765982957,5.08024538767705,5.53558308826113,0,3.17736781726402,2.32728503501889,4.28755648150975,1.25559489221072,2.3440060335714,0,2.94115744015507,1.36609096991689,0.971020706062307,3.52511090331616,4.8660926985367,7.52541683862894,1.56478268869608,4.57852828398938,5.05278220289285,5.63846707315422,2.79972843250725,4.31257693094915,5.03347818173209,7.97898356212479,7.39406358113421,0.257259436035947,1.71920063963254,2.06268836910977,10.5204559646991,5.28990979272033,12.0427966666174,0.677689064138264,0,1.3498495759221,0.988866362566974,1.4209602298922,5.39280198933128,4.61061966385865,4.66603255388149,4.45519596494579,3.78584930432488,14.568200204594,8.61387309711293,4.28717797252339,4.31304619582064,7.35375029288017,12.1127469099328,13.5348578370299,14.8998337258556,12.0016521834476,9.24025200384338,11.4600941522487,13.1216009530649,6.19038871034848,9.16789486660861,12.9636577608414,10.8202477407318,13.4207600994216,3.40767869999328,2.11600368298999,5.50742528533188,2.58127163094416,9.51959867190851,4.85732872474035,7.79731700937203,8.06448396775204,5.47733238513832,1.70430322578058,1.29893002301434,0.70667914902068,3.52108549441701,3.84979432242953,7.64415719119937,0,2.16491041011214,3.04031838570118,3.0331466700887,4.45317130904334,9.06282592765101,4.89859058913922,3.29622120855658,5.78484408793068,3.45923245884088,3.46662073271032,5.17390311397101,3.64433114856059,4.6967043869531,8.53136205827479,4.42305275974937,7.60304194752823,3.75430581382669,6.78825354389311,1.86391761218122,14.3462590535658,19.4785437336513,4.59822699375465,1.67741174308288,0.599902730993408,2.92261522268049,21.7196427136993,10.5225138648284,5.52879149296603,16.8609590586508,15.5986428971502,18.7009240103604,14.7639549391659,4.88828946481518,6.34475550111474,6.57079171927554,4.62972082950243,4.03373373184381,2.5289231487682,6.30217454318722,5.42537344208574,7.75616090325138,8.83984669965463,7.68354141389776,11.9003550539947,4.74249584452253,6.05139456537022,6.33424046990216,4.82230611340665,5.56094498451196,6.96504333044333,8.0255033199098,2.38841120182192,2.80885274925294,2.05878325691772,0,6.42089894860056,6.0976775595085,7.20248245844059,6.39210786080068,6.68998387941173,9.10175966035532,9.53389173476672,8.31647544338819,9.45799273174073,13.1647879930784,16.9092488001468,19.132239052822,18.1287984407412,16.4662586468288,14.8969124824013,7.78072809687271,4.52780294468852,8.26046957459495,7.1401652999157,3.41261200856374,3.0190767341857,3.60828891701861,3.83198696784351,4.44756087689741,4.56541502670142,4.74529061544512,3.62337700392824,2.5133520880027,3.78017296878187,3.8992817423824,4.49409704327111,2.16138049874694,2.98711909881551,3.79335801906163,3.99869794134051,1.1270773567308,6.31319116320474,6.59438456369928,7.78507600782536,9.80166325425988,9.88987991463334,8.47793130343424,7.28043267138623,16.008441862706,2.16898637430922,3.73462090715086,2.24862112384854,3.24576194221605,2.894125917029,4.32863948028414,4.31544206176216,2.59416362840057,4.3929826110093,5.75072826109418,3.34926852901653,8.42501717409313,7.57736633841335,7.53469136792031,9.64887042726734,8.31389355749721,3.41084541186873,1.95557971730431,3.39490171550376,2.81628297946203,3.1826188913945,3.33261097240419,7.80534591431195,5.2019597555043,5.97954662051692,5.74037167166954,4.42430949732493,4.14443956478149,7.37710198765709,0,3.26343410291226,2.45882136509518,3.86311444826625,19.7477225684984,19.2227166011213,4.59017847054691,23.2273253028023,6.62567260774139,6.63745865304285,6.67812532971677,2.38968797952552,3.11918143715352,4.52922449262132,4.85772842009873,4.38383786866968,4.74345333535828,15.7447445046685,4.5420827266646,3.20518086601059,4.0721739838394,3.29940245945071,2.65490276679926,2.18502572539483,0.906970670894253,3.20628635585027,2.06711325016541,1.53717573971964,4.13485269069154,3.99887102425256,4.27796854061666,4.74055136903724,4.21674434299995,4.12542172992747,4.76615448055303,4.32146625675145,4.2688365648309,4.07240366560025,8.15765074754458,7.49149033928696,6.91105886528908,9.43841342255258,2.58138878870081,4.66030555900404,6.61585194164886,13.3557864882599,14.6932628293274,10.434136012571,13.0115854963419,10.669158483429,2.91480836629851,16.5028518789354,1.87957968877638,2.68302928352189,2.03713980106683,2.26042148405629,2.46049609897845,1.83022538565218,2.88963330989554,5.17820373597535,4.42239916174156,4.77335309007557,4.11236791655476,4.06638934253697,3.24016022465404,3.76358932826044,4.36725127492355,4.45052343069908,6.36431609085087,7.0674104335688,3.24037433229482,4.34937519160848,8.45539408026285,4.33597983527538,3.80554528051325,7.00024278038572,4.26227417476513,5.74450826668646,4.92900402312167,6.2498104725096,11.3248091979768,8.45544422891021,8.64090018773596,12.0084225838708,3.24360344464263,4.72470402958205,5.97635785697857,5.72885426135941,5.56307793387542,8.17329056735788,6.64602872285597,8.6831146955407,8.76378276532498,8.97353047717881,11.9873193309895,8.27421838106833,10.9864288050675,9.74940649545409,5.32766288097755,6.01082839283487,3.52557694364565,4.056981474676,4.129014459926,3.11357761254351,5.78794623513478,4.01257683228291,10.1655331671072,10.5874804396651,9.73922372846974,11.6860163993708,6.85082519770642,9.06472676867641,7.42524750254986,9.90706647093285,11.3285602246051,15.5328093525546,4.15149390336707,5.1873233542134,4.43907374960749,5.34834777550247,4.61148957781561,4.04455718590031,7.55638874525492,3.7086310303001,7.38114182061175,7.83361356467772,8.36481689637791,6.79054828989874,5.89941497060259,7.42691767896484,7.06456268154043,6.19181798667996,5.91010062318763,7.5234595980845,6.1812885120496,5.5935589651071,6.85738504770831,6.92155644021416,6.43777712857767,6.54058874845478,5.55245344450451,7.95377314181759,7.50004688778368,7.3659519202596,6.92600980613895,6.73370725989286,6.28765596058123,7.38783617816726,1.63692417267876,6.04253680625267,5.78719832943424,6.99469618226249,4.67863216890817,9.23945532407683,5.35607329792761,5.51478547798789,5.79669589051054
|short_description=p3@Clec16a
}}

Revision as of 11:56, 13 September 2013

Short description:p3@Clec16a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Clec16a_5end
Coexpression cluster:NA
Association with transcript: 19bp_to_ENSMUST00000038145, ENSMUST00000115828, ENSMUST00000150894_5end
EntrezGene:Clec16a
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Clec16a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.48
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.74
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I28.19
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.03
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.39
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.46
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.24
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.17
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F92.12
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.45
accessory axillary lymph node, adult.CNhs10475.1063-29H99.06
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C15.17
adrenal gland, neonate N25.CNhs11223.1377-27I33.64
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H18.53
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F57.60
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B214.35
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A421.72
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D516.86
cortex, neonate N30.CNhs11107.1392-42F215.60
diencephalon, adult.CNhs10482.20-12F218.70
diencephalon, neonate N30.CNhs11201.1388-42B214.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.89
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C96.30
eyeball, embryo E17.CNhs11023.1261-18D45.43
eyeball, neonate N00.CNhs11207.633-15C67.76
eyeball, neonate N01.CNhs11140.1532-43E78.84
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A211.90
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E26.33
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B58.03
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F56.10
heart, embryo E13.CNhs11013.376-3I97.20
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C86.69
heart, embryo E16.CNhs11021.457-17C69.10
heart, embryo E17.CNhs11025.479-18E59.53
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E39.46
heart, neonate N03.CNhs11221.1349-25I213.16
heart, neonate N10.CNhs11118.749-24G116.91
heart, neonate N16.CNhs11209.782-15G119.13
heart, neonate N20.CNhs11127.821-26I618.13
heart, neonate N25.CNhs11196.1351-25D316.47
heart, neonate N30.CNhs11202.1390-42D214.90
hippocampus, adult.CNhs10478.13-16E87.78
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I93.79
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C76.59
kidney, neonate N00.CNhs11214.646-21G77.79
kidney, neonate N10.CNhs11206.758-6D59.80
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H17.28
liver, adult pregnant day01.CNhs10466.508-5B216.01
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A37.58
liver, neonate N25.CNhs11198.1368-26H17.53
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G23.41
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B62.82
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I63.33
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A35.98
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C74.14
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C219.75
medulla oblongata, neonate N30.CNhs11200.1396-42A319.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.59
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.23
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.74
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H73.21
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E64.32
pituitary gland, embryo E13.CNhs11009.370-44C74.27
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B98.16
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C313.36
skin, neonate N00.CNhs11124.650-25G414.69
skin, neonate N03.CNhs11215.662-22H310.43
skin, neonate N06.CNhs11097.693-20I513.01
skin, neonate N10.CNhs11108.762-6C410.67
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C916.50
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.26
spleen, neonate N20.CNhs11112.824-19H12.46
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E34.11
stomach, embryo E15.CNhs10603.1252-16G84.07
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F54.34
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B74.93
testis, neonate N07.CNhs11222.726-26I46.25
testis, neonate N10.CNhs11204.763-44D911.32
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E28.64
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C55.98
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F88.17
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C48.68
thymus, neonate N07.CNhs11211.713-19D38.76
thymus, neonate N10.CNhs11194.748-24E48.97
thymus, neonate N20.CNhs11186.820-7A211.99
thymus, neonate N25.CNhs11125.1362-25G78.27
thymus, neonate N30.CNhs11132.1393-42G210.99
tongue, adult.CNhs10499.32-1B49.75
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.01
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E53.11
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A915.53
whole body, embryo E11.CNhs11014.324-5I84.15
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H24.44
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.54
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.55
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.93
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.29
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F95.79
whole body, embryo E17.CNhs10517.475-3I56.99
whole body, embryo E18.CNhs10516.493-3B34.68
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D15.51
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.34e-1154
epithelium1.49e-10174
structure with developmental contribution from neural crest1.65e-1092
ecto-epithelium1.82e-1073
neurectoderm6.12e-1064
neural plate6.12e-1064
presumptive neural plate6.12e-1064
neural tube7.62e-1052
neural rod7.62e-1052
future spinal cord7.62e-1052
neural keel7.62e-1052
cell layer1.31e-09176
ectoderm-derived structure1.81e-0995
ectoderm1.81e-0995
presumptive ectoderm1.81e-0995
central nervous system2.26e-0973
nervous system1.89e-0875
brain8.26e-0847
future brain8.26e-0847
tube1.17e-07114
regional part of brain2.41e-0746
anatomical conduit3.62e-07122
gray matter3.76e-0734







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