FFCP PHASE1:Mm9::chr15:98397940..98397947,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=12455|HGNC=|MCL_coexpression_id=169|UniProt=|association_with_transcript=28bp_to_ENSMUST00000164565_5end|description=CAGE_peak_8_at_Ccnt1_5end|id=chr15:98397940..98397947,-|ontology_enrichment_celltype=CL:0000791!1.10e-07!9;CL:0000789!1.10e-07!9;CL:0002420!1.10e-07!9;CL:0002419!1.10e-07!9;CL:0000790!1.10e-07!9|ontology_enrichment_celltype_v019_2=CL:0000764,3.64e-07,3;CL:0000765,3.64e-07,3;CL:0000038,3.64e-07,3;CL:0000547,3.64e-07,3;CL:0002614,4.77e-07,3;CL:0000068,5.46e-07,3;CL:0002202,5.46e-07,3;CL:0000069,5.46e-07,3;CL:0002632,5.46e-07,3;CL:0002368,5.46e-07,3;CL:0000307,5.46e-07,3;CL:0000377,5.46e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,3.64e-07,3;DOID:0060083,3.64e-07,3;DOID:1240,3.64e-07,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.77e-07,3;UBERON:0009663,4.77e-07,3;UBERON:0009661,4.77e-07,3;UBERON:0000125,4.77e-07,3;UBERON:0002308,4.77e-07,3;UBERON:0003126,5.46e-07,3;UBERON:0001005,5.46e-07,3;UBERON:0007196,5.46e-07,3;UBERON:0001558,5.46e-07,3|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0.258246646883153,0.422366166455,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,1.23012957516914,0,0,0.166234645358492,0,0,0,0,1.17646297606203,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,1.01104889002957,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0.702213187313235,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.509935289981566,3.35883485576779,0.690999869022119,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.207574695168353,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.169229215783353,0,0,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p8@Ccnt1}} | ||
|EntrezGene=12455 | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt= | |||
|association_with_transcript=28bp_to_ENSMUST00000164565_5end | |||
|description=CAGE_peak_8_at_Ccnt1_5end | |||
|id=chr15:98397940..98397947,- | |||
|ontology_enrichment_celltype=CL:0000791!1.10e-07!9;CL:0000789!1.10e-07!9;CL:0002420!1.10e-07!9;CL:0002419!1.10e-07!9;CL:0000790!1.10e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.64e-07,3;CL:0000765,3.64e-07,3;CL:0000038,3.64e-07,3;CL:0000547,3.64e-07,3;CL:0002614,4.77e-07,3;CL:0000068,5.46e-07,3;CL:0002202,5.46e-07,3;CL:0000069,5.46e-07,3;CL:0002632,5.46e-07,3;CL:0002368,5.46e-07,3;CL:0000307,5.46e-07,3;CL:0000377,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.64e-07,3;DOID:0060083,3.64e-07,3;DOID:1240,3.64e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,4.77e-07,3;UBERON:0009663,4.77e-07,3;UBERON:0009661,4.77e-07,3;UBERON:0000125,4.77e-07,3;UBERON:0002308,4.77e-07,3;UBERON:0003126,5.46e-07,3;UBERON:0001005,5.46e-07,3;UBERON:0007196,5.46e-07,3;UBERON:0001558,5.46e-07,3 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0.258246646883153,0.422366166455,0.70219357896598,0,0.0797721589953364,0.171200729931206,0.262261207256992,0,0.202475267389826,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0,0,1.23012957516914,0,0,0.166234645358492,0,0,0,0,1.17646297606203,0,0.485510353031154,0,0,0.183546752161682,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,1.12552522006336,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,1.01104889002957,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0.199034266818493,0.702213187313235,0.257347907114715,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0.407302655690628,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0.509935289981566,3.35883485576779,0.690999869022119,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.207574695168353,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0.238436189947321,0,0,0.169229215783353,0,0,0,0.561142271657738,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p8@Ccnt1 | |||
}} |
Revision as of 11:49, 13 September 2013
Short description: | p8@Ccnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ccnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | 28bp_to_ENSMUST00000164565_5end |
EntrezGene: | Ccnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.64e-07 | 3 |
erythroblast | 3.64e-07 | 3 |
erythroid progenitor cell | 3.64e-07 | 3 |
proerythroblast | 3.64e-07 | 3 |
neuron of the substantia nigra | 4.77e-07 | 3 |
duct epithelial cell | 5.46e-07 | 3 |
epithelial cell of tracheobronchial tree | 5.46e-07 | 3 |
branched duct epithelial cell | 5.46e-07 | 3 |
epithelial cell of lower respiratory tract | 5.46e-07 | 3 |
respiratory epithelial cell | 5.46e-07 | 3 |
tracheal epithelial cell | 5.46e-07 | 3 |
tracheoblast | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 4.77e-07 | 3 |
telencephalic nucleus | 4.77e-07 | 3 |
midbrain nucleus | 4.77e-07 | 3 |
neural nucleus | 4.77e-07 | 3 |
nucleus of brain | 4.77e-07 | 3 |
trachea | 5.46e-07 | 3 |
respiratory airway | 5.46e-07 | 3 |
tracheobronchial tree | 5.46e-07 | 3 |
lower respiratory tract | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.64e-07 | 3 |
immune system cancer | 3.64e-07 | 3 |
leukemia | 3.64e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.