FFCP PHASE1:Mm9::chr15:97297648..97297652,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:97297648..97297652,+|id=chr15:97297648..97297652,+|ontology_enrichment_celltype=CL:0000791!2.84e-23!9;CL:0000789!2.84e-23!9;CL:0002420!2.84e-23!9;CL:0002419!2.84e-23!9;CL:0000790!2.84e-23!9;CL:0000838!1.62e-22!12;CL:0000542!1.05e-20!13;CL:0000051!1.05e-20!13;CL:0002031!1.41e-19!25;CL:0000624!3.12e-19!8;CL:0000084!6.58e-19!11;CL:0000827!6.58e-19!11;CL:0000893!7.88e-18!6;CL:0002489!7.88e-18!6;CL:0000898!7.88e-18!6;CL:0000809!7.88e-18!6;CL:0000810!7.88e-18!6;CL:0000895!7.88e-18!6;CL:0000808!7.88e-18!6;CL:0000894!7.88e-18!6;CL:0000806!7.88e-18!6;CL:0000807!7.88e-18!6;CL:0000805!7.88e-18!6;CL:0002425!7.88e-18!6;CL:0002436!7.88e-18!6;CL:0002427!7.88e-18!6;CL:0002428!7.88e-18!6;CL:0002429!7.88e-18!6;CL:0002433!7.88e-18!6;CL:0002431!7.88e-18!6;CL:0002432!7.88e-18!6;CL:0000738!1.37e-15!17;CL:0002087!1.37e-15!17;CL:0000988!6.68e-15!32;CL:0002032!6.68e-15!32;CL:0000037!6.68e-15!32;CL:0000566!6.68e-15!32;CL:0000837!6.68e-15!32;CL:0002320!8.20e-10!46;CL:0000134!8.20e-10!46;CL:0000219!4.36e-08!54;CL:0000553!3.85e-07!6;CL:0000556!3.85e-07!6|ontology_enrichment_celltype_v019_2=CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000625,5.07e-23,1;CL:0000791,1.19e-22,9;CL:0000789,1.19e-22,9;CL:0002420,1.19e-22,9;CL:0002419,1.19e-22,9;CL:0000790,1.19e-22,9;CL:0000084,1.00e-18,11;CL:0000827,1.00e-18,11;CL:0000838,2.99e-17,12;CL:0000542,5.32e-16,13;CL:0000051,5.32e-16,13;CL:0000738,1.84e-12,17;CL:0002087,1.84e-12,17;CL:0000624,5.55e-12,8;CL:0002031,9.29e-09,25;CL:0000988,5.08e-07,32;CL:0002032,5.08e-07,32;CL:0000037,5.08e-07,32;CL:0000837,5.08e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.00e-17!48;UBERON:0002390!4.53e-16!45;UBERON:0003061!4.53e-16!45;UBERON:0004177!1.11e-15!29;UBERON:0002370!1.84e-13!23;UBERON:0000974!1.84e-13!23;UBERON:0004807!1.84e-13!23;UBERON:0005058!1.84e-13!23;UBERON:0003351!1.84e-13!23;UBERON:0009113!1.84e-13!23;UBERON:0003295!1.84e-13!23;UBERON:0009722!1.84e-13!23;UBERON:0005562!1.84e-13!23;UBERON:0007690!1.84e-13!23;UBERON:0006562!7.57e-13!24;UBERON:0003408!7.57e-13!24;UBERON:0001557!7.57e-13!24;UBERON:0001042!7.57e-13!24;UBERON:0008814!7.57e-13!24;UBERON:0009145!7.57e-13!24;UBERON:0000072!2.81e-11!27;UBERON:0002405!3.75e-11!70;UBERON:0002384!8.20e-10!46;UBERON:0003081!1.12e-09!88;UBERON:0000065!1.08e-08!41;UBERON:0001004!1.89e-08!42;UBERON:0000063!2.09e-08!35;UBERON:0005057!3.69e-08!51|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.39e-22,1;UBERON:0001097,1.39e-22,1;UBERON:0003968,1.39e-22,1;UBERON:0001467,1.39e-22,1;UBERON:0002465,1.88e-08,3|phase1_expression=0,0,0,0,0,0,0,9.16775596435192,0.140788722151667,0.468129052643987,0,0.0797721589953364,1.71200729931206,0.874204024189974,0,0,0.699561878128147,0.315462165358238,0.548457734422955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:97297648..97297652,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:97297648..97297652,+ | |||
|id=chr15:97297648..97297652,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.84e-23!9;CL:0000789!2.84e-23!9;CL:0002420!2.84e-23!9;CL:0002419!2.84e-23!9;CL:0000790!2.84e-23!9;CL:0000838!1.62e-22!12;CL:0000542!1.05e-20!13;CL:0000051!1.05e-20!13;CL:0002031!1.41e-19!25;CL:0000624!3.12e-19!8;CL:0000084!6.58e-19!11;CL:0000827!6.58e-19!11;CL:0000893!7.88e-18!6;CL:0002489!7.88e-18!6;CL:0000898!7.88e-18!6;CL:0000809!7.88e-18!6;CL:0000810!7.88e-18!6;CL:0000895!7.88e-18!6;CL:0000808!7.88e-18!6;CL:0000894!7.88e-18!6;CL:0000806!7.88e-18!6;CL:0000807!7.88e-18!6;CL:0000805!7.88e-18!6;CL:0002425!7.88e-18!6;CL:0002436!7.88e-18!6;CL:0002427!7.88e-18!6;CL:0002428!7.88e-18!6;CL:0002429!7.88e-18!6;CL:0002433!7.88e-18!6;CL:0002431!7.88e-18!6;CL:0002432!7.88e-18!6;CL:0000738!1.37e-15!17;CL:0002087!1.37e-15!17;CL:0000988!6.68e-15!32;CL:0002032!6.68e-15!32;CL:0000037!6.68e-15!32;CL:0000566!6.68e-15!32;CL:0000837!6.68e-15!32;CL:0002320!8.20e-10!46;CL:0000134!8.20e-10!46;CL:0000219!4.36e-08!54;CL:0000553!3.85e-07!6;CL:0000556!3.85e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,3.06e-23,1;CL:0000792,3.06e-23,1;CL:0000625,5.07e-23,1;CL:0000791,1.19e-22,9;CL:0000789,1.19e-22,9;CL:0002420,1.19e-22,9;CL:0002419,1.19e-22,9;CL:0000790,1.19e-22,9;CL:0000084,1.00e-18,11;CL:0000827,1.00e-18,11;CL:0000838,2.99e-17,12;CL:0000542,5.32e-16,13;CL:0000051,5.32e-16,13;CL:0000738,1.84e-12,17;CL:0002087,1.84e-12,17;CL:0000624,5.55e-12,8;CL:0002031,9.29e-09,25;CL:0000988,5.08e-07,32;CL:0002032,5.08e-07,32;CL:0000037,5.08e-07,32;CL:0000837,5.08e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.00e-17!48;UBERON:0002390!4.53e-16!45;UBERON:0003061!4.53e-16!45;UBERON:0004177!1.11e-15!29;UBERON:0002370!1.84e-13!23;UBERON:0000974!1.84e-13!23;UBERON:0004807!1.84e-13!23;UBERON:0005058!1.84e-13!23;UBERON:0003351!1.84e-13!23;UBERON:0009113!1.84e-13!23;UBERON:0003295!1.84e-13!23;UBERON:0009722!1.84e-13!23;UBERON:0005562!1.84e-13!23;UBERON:0007690!1.84e-13!23;UBERON:0006562!7.57e-13!24;UBERON:0003408!7.57e-13!24;UBERON:0001557!7.57e-13!24;UBERON:0001042!7.57e-13!24;UBERON:0008814!7.57e-13!24;UBERON:0009145!7.57e-13!24;UBERON:0000072!2.81e-11!27;UBERON:0002405!3.75e-11!70;UBERON:0002384!8.20e-10!46;UBERON:0003081!1.12e-09!88;UBERON:0000065!1.08e-08!41;UBERON:0001004!1.89e-08!42;UBERON:0000063!2.09e-08!35;UBERON:0005057!3.69e-08!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.39e-22,1;UBERON:0001097,1.39e-22,1;UBERON:0003968,1.39e-22,1;UBERON:0001467,1.39e-22,1;UBERON:0002465,1.88e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,9.16775596435192,0.140788722151667,0.468129052643987,0,0.0797721589953364,1.71200729931206,0.874204024189974,0,0,0.699561878128147,0.315462165358238,0.548457734422955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671130424230945,0,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:97297648..97297652,+ | |||
}} |
Revision as of 11:44, 13 September 2013
Short description: | p@chr15:97297648..97297652, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:97297648..97297652, + |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 3.06e-23 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.06e-23 | 1 |
CD8-positive, alpha-beta T cell | 5.07e-23 | 1 |
mature alpha-beta T cell | 1.19e-22 | 9 |
alpha-beta T cell | 1.19e-22 | 9 |
immature T cell | 1.19e-22 | 9 |
mature T cell | 1.19e-22 | 9 |
immature alpha-beta T cell | 1.19e-22 | 9 |
T cell | 1.00e-18 | 11 |
pro-T cell | 1.00e-18 | 11 |
lymphoid lineage restricted progenitor cell | 2.99e-17 | 12 |
lymphocyte | 5.32e-16 | 13 |
common lymphoid progenitor | 5.32e-16 | 13 |
leukocyte | 1.84e-12 | 17 |
nongranular leukocyte | 1.84e-12 | 17 |
CD4-positive, alpha-beta T cell | 5.55e-12 | 8 |
hematopoietic lineage restricted progenitor cell | 9.29e-09 | 25 |
hematopoietic cell | 5.08e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.08e-07 | 32 |
hematopoietic stem cell | 5.08e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.08e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.39e-22 | 1 |
axillary lymph node | 1.39e-22 | 1 |
peripheral lymph node | 1.39e-22 | 1 |
shoulder | 1.39e-22 | 1 |
lymphoid system | 1.88e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.