FFCP PHASE1:Mm9::chr15:84986556..84986567,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100502602|HGNC=|MCL_coexpression_id=10|UniProt=|association_with_transcript=0bp_to_NR_040360,uc007xda.1_5end|description=CAGE_peak_1_at_Gm19277_5end|id=chr15:84986556..84986567,-|ontology_enrichment_celltype=CL:0002494!1.33e-07!3;CL:0000737!1.33e-07!3;CL:0000746!1.33e-07!3;CL:0000513!1.33e-07!3|ontology_enrichment_celltype_v019_2=CL:0002494,1.27e-10,3;CL:0000737,1.27e-10,3;CL:0000746,1.27e-10,3;CL:0000513,1.27e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.45e-30!18;UBERON:0000948!2.45e-30!18;UBERON:0005498!2.45e-30!18;UBERON:0004140!2.45e-30!18;UBERON:0009881!2.45e-30!18;UBERON:0004141!2.45e-30!18;UBERON:0003084!2.45e-30!18;UBERON:0007005!2.45e-30!18;UBERON:0004139!2.45e-30!18;UBERON:0004291!2.45e-30!18;UBERON:0004535!8.04e-23!23;UBERON:0001009!8.04e-23!23;UBERON:0003103!1.56e-16!43;UBERON:0004872!1.90e-16!33;UBERON:0003914!1.18e-11!47;UBERON:0004111!3.72e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.89e-48,18;UBERON:0000948,1.89e-48,18;UBERON:0005498,1.89e-48,18;UBERON:0004140,1.89e-48,18;UBERON:0009881,1.89e-48,18;UBERON:0004141,1.89e-48,18;UBERON:0003084,1.89e-48,18;UBERON:0007005,1.89e-48,18;UBERON:0004139,1.89e-48,18;UBERON:0004291,1.89e-48,18;UBERON:0004535,8.82e-38,23;UBERON:0001009,8.82e-38,23;UBERON:0004872,4.05e-26,33;UBERON:0003103,7.30e-20,43;UBERON:0003914,4.21e-18,47;UBERON:0010314,1.38e-10,92;UBERON:0003081,2.39e-09,87;UBERON:0000025,2.44e-08,114;UBERON:0004111,1.02e-07,122;UBERON:0001048,6.31e-07,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0.257259436035947,3.15186783932632,6.18806510732931,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,1.07986979021165,0.697601834251224,1.07309360559848,6.53885917256149,5.9241545968853,21.6701052584406,22.456060244202,29.0937974976411,6.80605357402257,13.5548482947975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p1@Gm19277}} | ||
|EntrezGene=100502602 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_040360,uc007xda.1_5end | |||
|description=CAGE_peak_1_at_Gm19277_5end | |||
|id=chr15:84986556..84986567,- | |||
|ontology_enrichment_celltype=CL:0002494!1.33e-07!3;CL:0000737!1.33e-07!3;CL:0000746!1.33e-07!3;CL:0000513!1.33e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.27e-10,3;CL:0000737,1.27e-10,3;CL:0000746,1.27e-10,3;CL:0000513,1.27e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.45e-30!18;UBERON:0000948!2.45e-30!18;UBERON:0005498!2.45e-30!18;UBERON:0004140!2.45e-30!18;UBERON:0009881!2.45e-30!18;UBERON:0004141!2.45e-30!18;UBERON:0003084!2.45e-30!18;UBERON:0007005!2.45e-30!18;UBERON:0004139!2.45e-30!18;UBERON:0004291!2.45e-30!18;UBERON:0004535!8.04e-23!23;UBERON:0001009!8.04e-23!23;UBERON:0003103!1.56e-16!43;UBERON:0004872!1.90e-16!33;UBERON:0003914!1.18e-11!47;UBERON:0004111!3.72e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.89e-48,18;UBERON:0000948,1.89e-48,18;UBERON:0005498,1.89e-48,18;UBERON:0004140,1.89e-48,18;UBERON:0009881,1.89e-48,18;UBERON:0004141,1.89e-48,18;UBERON:0003084,1.89e-48,18;UBERON:0007005,1.89e-48,18;UBERON:0004139,1.89e-48,18;UBERON:0004291,1.89e-48,18;UBERON:0004535,8.82e-38,23;UBERON:0001009,8.82e-38,23;UBERON:0004872,4.05e-26,33;UBERON:0003103,7.30e-20,43;UBERON:0003914,4.21e-18,47;UBERON:0010314,1.38e-10,92;UBERON:0003081,2.39e-09,87;UBERON:0000025,2.44e-08,114;UBERON:0004111,1.02e-07,122;UBERON:0001048,6.31e-07,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0,0,0,0,0,0.257259436035947,3.15186783932632,6.18806510732931,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,1.07986979021165,0.697601834251224,1.07309360559848,6.53885917256149,5.9241545968853,21.6701052584406,22.456060244202,29.0937974976411,6.80605357402257,13.5548482947975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0.214368379079066,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p1@Gm19277 | |||
}} |
Revision as of 11:27, 13 September 2013
Short description: | p1@Gm19277 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm19277_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 0bp_to_NR_040360, uc007xda.1_5end |
EntrezGene: | Gm19277 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.27e-10 | 3 |
striated muscle cell | 1.27e-10 | 3 |
cardiac muscle cell | 1.27e-10 | 3 |
cardiac muscle myoblast | 1.27e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.89e-48 | 18 |
heart | 1.89e-48 | 18 |
primitive heart tube | 1.89e-48 | 18 |
primary heart field | 1.89e-48 | 18 |
anterior lateral plate mesoderm | 1.89e-48 | 18 |
heart tube | 1.89e-48 | 18 |
heart primordium | 1.89e-48 | 18 |
cardiac mesoderm | 1.89e-48 | 18 |
cardiogenic plate | 1.89e-48 | 18 |
heart rudiment | 1.89e-48 | 18 |
cardiovascular system | 8.82e-38 | 23 |
circulatory system | 8.82e-38 | 23 |
splanchnic layer of lateral plate mesoderm | 4.05e-26 | 33 |
compound organ | 7.30e-20 | 43 |
epithelial tube | 4.21e-18 | 47 |
structure with developmental contribution from neural crest | 1.38e-10 | 92 |
lateral plate mesoderm | 2.39e-09 | 87 |
tube | 2.44e-08 | 114 |
anatomical conduit | 1.02e-07 | 122 |
primordium | 6.31e-07 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.