FFCP PHASE1:Hg19::chr4:68424462..68424469,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26228|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24133|TSSclassifier=S|UniProt=Q9ULZ2|association_with_transcript=16bp_to_ENST00000265404,ENST00000396225,NM_012108,uc003hde.3,uc003hdf.2_5end|coexpression_cluster_id=C47|description=CAGE_peak_3_at_STAP1_5end|id=chr4:68424462..68424469,+|ontology_enrichment_celltype=CL:0000945!3.91e-40!24;CL:0000826!3.91e-40!24;CL:0000037!4.07e-35!172;CL:0000566!4.07e-35!172;CL:0000988!1.64e-33!182;CL:0002032!1.04e-31!165;CL:0000837!1.04e-31!165;CL:0000236!3.00e-30!14;CL:0000542!1.06e-26!53;CL:0000051!1.06e-26!53;CL:0000838!3.59e-25!52;CL:0002031!8.25e-20!124;CL:0000738!1.56e-19!140;CL:0002087!4.78e-17!119;CL:0002274!2.73e-12!5;CL:0000457!2.73e-12!5;CL:0002191!2.73e-12!5;CL:0000097!2.73e-12!5;CL:0000831!2.73e-12!5;CL:0002028!2.73e-12!5;CL:0000763!5.98e-10!112;CL:0000049!5.98e-10!112;CL:0000134!3.46e-08!358;CL:0002320!9.62e-08!365;CL:0000817!1.60e-07!3|ontology_enrichment_celltype_v019=CL:0000236;1.64e-62;13!CL:0000945;3.13e-46;24!CL:0000097;2.52e-35;5!CL:0000163;1.38e-19;9!CL:0000542;1.01e-17;53!CL:0002032;2.17e-08;1!CL:0000557;2.17e-08;1!CL:0000817;4.56e-08;1!CL:0000785;4.56e-08;1!CL:0000819;4.56e-08;1|ontology_enrichment_celltype_v019_2=CL:0000236,3.97e-58,14;CL:0000945,2.20e-46,24;CL:0000826,2.20e-46,24;CL:0000097,2.72e-35,5;CL:0002028,2.72e-35,5;CL:0000542,6.27e-23,53;CL:0000051,6.27e-23,53;CL:0000838,4.19e-20,52;CL:0000163,1.44e-19,9;CL:0000037,1.74e-17,168;CL:0002032,1.17e-16,161;CL:0000837,1.17e-16,161;CL:0000738,2.00e-16,136;CL:0000988,2.21e-16,177;CL:0002031,3.72e-15,120;CL:0000817,7.46e-10,3;CL:0002087,5.02e-09,115;CL:0000819,6.68e-08,1|ontology_enrichment_development_v019=CL:0000051;1.01e-17;53|ontology_enrichment_disease=DOID:2531!3.40e-22!51;DOID:0060083!3.40e-22!51;DOID:1240!1.53e-17!39;DOID:8692!1.36e-14!31;DOID:0060058!1.46e-09!10|ontology_enrichment_disease_v019=DOID:0060073;4.56e-08;1!DOID:8675;4.56e-08;1!DOID:12603;4.56e-08;1|ontology_enrichment_disease_v019_2=DOID:12603,3.83e-08,1;DOID:0060073,6.68e-08,1;DOID:8675,6.68e-08,1|ontology_enrichment_uberon=UBERON:0002384!1.37e-07!375;UBERON:0002193!1.63e-07!112;UBERON:0002390!2.30e-07!102;UBERON:0003061!2.30e-07!102;UBERON:0004177!6.07e-07!7|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0,0,0,0,0,0,0,1.70427841276664,0.995184627411951,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,5.27988733383968,3.82297027883492,1.77901850772711,2.56038133539904,0.800791974072025,2.29900975981793,4.62731410949403,2.86216126360609,1.70763890732835,1.17447437874188,0.764546456250458,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,1.00269411196656,0,0,0,0.512365278902701,0.520237390239513,3.4531959966772,3.03985019564433,1.15921234294021,0.14828656316206,0,0,1.92625882585863,0,0,0.506039384039006,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,3.94130590316755,4.4024217006613,2.07328115540772,3.747118788841,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,1.48642540100575,1.44269212976445,0,0,0.798317485731266,0.383010740264733,0.211673582723883,0.973865820823666,0.280797178113459,0.228234679033192,0.313359791546046,0,0.50787533340481,0.321176150207399,0,0.851692475380653,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.659215496907038,0,0,0.828851746593443,0,0,0.984678443688556,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,0.166211681900156,0,0,0,0,2.54298526368606,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,1.094728735294,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26228 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24133 | |||
|TSSclassifier=S | |||
|UniProt=Q9ULZ2 | |||
|association_with_transcript=16bp_to_ENST00000265404,ENST00000396225,NM_012108,uc003hde.3,uc003hdf.2_5end | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_STAP1_5end | |||
|id=chr4:68424462..68424469,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.91e-40!24;CL:0000826!3.91e-40!24;CL:0000037!4.07e-35!172;CL:0000566!4.07e-35!172;CL:0000988!1.64e-33!182;CL:0002032!1.04e-31!165;CL:0000837!1.04e-31!165;CL:0000236!3.00e-30!14;CL:0000542!1.06e-26!53;CL:0000051!1.06e-26!53;CL:0000838!3.59e-25!52;CL:0002031!8.25e-20!124;CL:0000738!1.56e-19!140;CL:0002087!4.78e-17!119;CL:0002274!2.73e-12!5;CL:0000457!2.73e-12!5;CL:0002191!2.73e-12!5;CL:0000097!2.73e-12!5;CL:0000831!2.73e-12!5;CL:0002028!2.73e-12!5;CL:0000763!5.98e-10!112;CL:0000049!5.98e-10!112;CL:0000134!3.46e-08!358;CL:0002320!9.62e-08!365;CL:0000817!1.60e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.64e-62;13!CL:0000945;3.13e-46;24!CL:0000097;2.52e-35;5!CL:0000163;1.38e-19;9!CL:0000542;1.01e-17;53!CL:0002032;2.17e-08;1!CL:0000557;2.17e-08;1!CL:0000817;4.56e-08;1!CL:0000785;4.56e-08;1!CL:0000819;4.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.97e-58,14;CL:0000945,2.20e-46,24;CL:0000826,2.20e-46,24;CL:0000097,2.72e-35,5;CL:0002028,2.72e-35,5;CL:0000542,6.27e-23,53;CL:0000051,6.27e-23,53;CL:0000838,4.19e-20,52;CL:0000163,1.44e-19,9;CL:0000037,1.74e-17,168;CL:0002032,1.17e-16,161;CL:0000837,1.17e-16,161;CL:0000738,2.00e-16,136;CL:0000988,2.21e-16,177;CL:0002031,3.72e-15,120;CL:0000817,7.46e-10,3;CL:0002087,5.02e-09,115;CL:0000819,6.68e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.01e-17;53 | |||
|ontology_enrichment_disease=DOID:2531!3.40e-22!51;DOID:0060083!3.40e-22!51;DOID:1240!1.53e-17!39;DOID:8692!1.36e-14!31;DOID:0060058!1.46e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060073;4.56e-08;1!DOID:8675;4.56e-08;1!DOID:12603;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,3.83e-08,1;DOID:0060073,6.68e-08,1;DOID:8675,6.68e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.37e-07!375;UBERON:0002193!1.63e-07!112;UBERON:0002390!2.30e-07!102;UBERON:0003061!2.30e-07!102;UBERON:0004177!6.07e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.328402357799783,0,0,0,0,0,0,0,1.70427841276664,0.995184627411951,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,5.27988733383968,3.82297027883492,1.77901850772711,2.56038133539904,0.800791974072025,2.29900975981793,4.62731410949403,2.86216126360609,1.70763890732835,1.17447437874188,0.764546456250458,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0.473447805734733,0,1.00269411196656,0,0,0,0.512365278902701,0.520237390239513,3.4531959966772,3.03985019564433,1.15921234294021,0.14828656316206,0,0,1.92625882585863,0,0,0.506039384039006,0.637130828648193,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0.476981248610684,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.148631162288728,0,0,0,0,0,0,3.94130590316755,4.4024217006613,2.07328115540772,3.747118788841,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,1.48642540100575,1.44269212976445,0,0,0.798317485731266,0.383010740264733,0.211673582723883,0.973865820823666,0.280797178113459,0.228234679033192,0.313359791546046,0,0.50787533340481,0.321176150207399,0,0.851692475380653,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,1.4098700508785,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0,0,0.659215496907038,0,0,0.828851746593443,0,0,0.984678443688556,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,0.166211681900156,0,0,0,0,2.54298526368606,0,0,0,0,0,0.0884575645033392,0,0.296521128680622,0,0,0,0,0,1.094728735294,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,2.07047417247523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193766729508018,0.372448285775147,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.641136984606466 | |||
|short_description=p3@STAP1 | |||
}} |
Revision as of 11:21, 13 September 2013
Short description: | p3@STAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_STAP1_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 16bp_to_ENST00000265404, ENST00000396225, NM_012108, uc003hde.3, uc003hdf.2_5end |
EntrezGene: | STAP1 |
HGNC: | 24133 |
UniProt: | Q9ULZ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.97e-58 | 14 |
lymphocyte of B lineage | 2.20e-46 | 24 |
pro-B cell | 2.20e-46 | 24 |
mast cell | 2.72e-35 | 5 |
basophil mast progenitor cell | 2.72e-35 | 5 |
lymphocyte | 6.27e-23 | 53 |
common lymphoid progenitor | 6.27e-23 | 53 |
lymphoid lineage restricted progenitor cell | 4.19e-20 | 52 |
endocrine cell | 1.44e-19 | 9 |
hematopoietic stem cell | 1.74e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.17e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-16 | 161 |
leukocyte | 2.00e-16 | 136 |
hematopoietic cell | 2.21e-16 | 177 |
hematopoietic lineage restricted progenitor cell | 3.72e-15 | 120 |
precursor B cell | 7.46e-10 | 3 |
nongranular leukocyte | 5.02e-09 | 115 |
B-1 B cell | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 3.83e-08 | 1 |
lymphatic system cancer | 6.68e-08 | 1 |
lymphosarcoma | 6.68e-08 | 1 |
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