FFCP PHASE1:Mm9::chr15:76351334..76351349,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=121|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:76351334..76351349,+|id=chr15:76351334..76351349,+|ontology_enrichment_celltype=CL:0000540!8.55e-10!33;CL:0000047!8.55e-10!33;CL:0000031!8.55e-10!33;CL:0000404!8.55e-10!33;CL:0000117!1.83e-09!23;CL:0000337!1.83e-09!23;CL:0000221!8.32e-08!44;CL:0000133!8.32e-08!44;CL:0000393!1.42e-07!39;CL:0000211!1.42e-07!39;CL:0002319!3.10e-07!43|ontology_enrichment_celltype_v019_2=CL:0002614,8.11e-10,3;CL:0002610,1.82e-09,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.76e-26!75;UBERON:0001016!2.76e-26!75;UBERON:0001017!5.31e-26!73;UBERON:0005743!5.31e-26!73;UBERON:0000955!2.83e-23!50;UBERON:0006238!2.83e-23!50;UBERON:0004121!5.77e-23!102;UBERON:0000924!5.77e-23!102;UBERON:0006601!5.77e-23!102;UBERON:0000033!4.13e-22!63;UBERON:0002616!5.78e-22!49;UBERON:0001049!2.47e-21!52;UBERON:0005068!2.47e-21!52;UBERON:0006241!2.47e-21!52;UBERON:0007135!2.47e-21!52;UBERON:0002346!2.31e-20!71;UBERON:0003075!2.31e-20!71;UBERON:0007284!2.31e-20!71;UBERON:0002020!1.72e-16!34;UBERON:0003080!5.87e-15!40;UBERON:0002791!6.29e-15!29;UBERON:0003528!6.29e-15!29;UBERON:0001893!6.29e-15!29;UBERON:0003056!7.52e-15!49;UBERON:0002021!4.68e-14!10;UBERON:0000411!4.68e-14!10;UBERON:0001950!4.68e-14!10;UBERON:0002780!9.00e-14!39;UBERON:0001890!9.00e-14!39;UBERON:0006240!9.00e-14!39;UBERON:0007811!1.96e-13!86;UBERON:0000153!1.91e-11!94;UBERON:0002619!9.82e-11!17;UBERON:0002298!6.21e-10!6;UBERON:0000956!9.08e-10!21;UBERON:0001869!9.08e-10!21;UBERON:0000203!9.08e-10!21;UBERON:0002950!1.93e-07!4;UBERON:0001891!1.93e-07!4;UBERON:0009616!1.93e-07!4;UBERON:0003076!3.53e-07!12;UBERON:0003057!3.53e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.14e-27,54;UBERON:0000955,2.53e-26,47;UBERON:0006238,2.53e-26,47;UBERON:0001017,1.38e-24,73;UBERON:0002616,3.16e-24,46;UBERON:0001016,8.59e-24,75;UBERON:0001049,3.36e-23,52;UBERON:0005068,3.36e-23,52;UBERON:0006241,3.36e-23,52;UBERON:0007135,3.36e-23,52;UBERON:0002346,6.30e-22,64;UBERON:0003075,6.30e-22,64;UBERON:0007284,6.30e-22,64;UBERON:0004121,5.06e-21,95;UBERON:0000924,5.06e-21,95;UBERON:0006601,5.06e-21,95;UBERON:0010371,1.29e-18,73;UBERON:0003080,8.20e-18,40;UBERON:0003056,9.41e-18,49;UBERON:0003528,6.15e-17,29;UBERON:0002791,6.15e-17,29;UBERON:0001893,6.15e-17,29;UBERON:0002021,1.03e-16,10;UBERON:0000411,1.03e-16,10;UBERON:0001950,1.03e-16,10;UBERON:0002780,6.43e-16,39;UBERON:0001890,6.43e-16,39;UBERON:0006240,6.43e-16,39;UBERON:0002020,5.14e-14,34;UBERON:0010314,9.60e-14,92;UBERON:0002950,7.89e-13,4;UBERON:0001891,7.89e-13,4;UBERON:0009616,7.89e-13,4;UBERON:0010286,7.89e-13,4;UBERON:0002619,4.93e-12,17;UBERON:0000956,7.97e-12,21;UBERON:0001869,7.97e-12,21;UBERON:0000203,7.97e-12,21;UBERON:0002038,8.11e-10,3;UBERON:0009663,8.11e-10,3;UBERON:0009661,8.11e-10,3;UBERON:0000125,8.11e-10,3;UBERON:0002308,8.11e-10,3;UBERON:0004684,1.82e-09,3;UBERON:0002275,1.82e-09,3;UBERON:0004733,2.74e-08,6;UBERON:0004732,2.74e-08,6;UBERON:0002028,2.74e-08,6;UBERON:0007277,2.74e-08,6;UBERON:0000025,4.69e-08,114;UBERON:0007023,2.19e-07,51;UBERON:0004111,3.17e-07,122|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.244981598429908,0,0,5.50579404996943,3.06449611404451,3.84016333140609,0.395658863190582,0.0914876436024097,0,5.58365998002762,7.87867654044352,3.0559649555362,0,0.569486723196412,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,8.49064311333487,11.9384622883669,0,0,0,0,8.68785708547972,8.23501085073528,0,4.69325664519146,4.85859368927628,5.194701113989,3.24482526135515,0,0,0,2.31486041475121,0,0,0,0,0,0,0.187403449119458,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,3.28192722458169,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0.460325236507177,1.71868654031819,1.20297227640581,0.685082519770642,3.0215755895588,2.70009000092722,2.2516060161211,4.53142408984205,4.14208249401456,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p@chr15:76351334..76351349,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:76351334..76351349,+ | |||
|id=chr15:76351334..76351349,+ | |||
|ontology_enrichment_celltype=CL:0000540!8.55e-10!33;CL:0000047!8.55e-10!33;CL:0000031!8.55e-10!33;CL:0000404!8.55e-10!33;CL:0000117!1.83e-09!23;CL:0000337!1.83e-09!23;CL:0000221!8.32e-08!44;CL:0000133!8.32e-08!44;CL:0000393!1.42e-07!39;CL:0000211!1.42e-07!39;CL:0002319!3.10e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,8.11e-10,3;CL:0002610,1.82e-09,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.76e-26!75;UBERON:0001016!2.76e-26!75;UBERON:0001017!5.31e-26!73;UBERON:0005743!5.31e-26!73;UBERON:0000955!2.83e-23!50;UBERON:0006238!2.83e-23!50;UBERON:0004121!5.77e-23!102;UBERON:0000924!5.77e-23!102;UBERON:0006601!5.77e-23!102;UBERON:0000033!4.13e-22!63;UBERON:0002616!5.78e-22!49;UBERON:0001049!2.47e-21!52;UBERON:0005068!2.47e-21!52;UBERON:0006241!2.47e-21!52;UBERON:0007135!2.47e-21!52;UBERON:0002346!2.31e-20!71;UBERON:0003075!2.31e-20!71;UBERON:0007284!2.31e-20!71;UBERON:0002020!1.72e-16!34;UBERON:0003080!5.87e-15!40;UBERON:0002791!6.29e-15!29;UBERON:0003528!6.29e-15!29;UBERON:0001893!6.29e-15!29;UBERON:0003056!7.52e-15!49;UBERON:0002021!4.68e-14!10;UBERON:0000411!4.68e-14!10;UBERON:0001950!4.68e-14!10;UBERON:0002780!9.00e-14!39;UBERON:0001890!9.00e-14!39;UBERON:0006240!9.00e-14!39;UBERON:0007811!1.96e-13!86;UBERON:0000153!1.91e-11!94;UBERON:0002619!9.82e-11!17;UBERON:0002298!6.21e-10!6;UBERON:0000956!9.08e-10!21;UBERON:0001869!9.08e-10!21;UBERON:0000203!9.08e-10!21;UBERON:0002950!1.93e-07!4;UBERON:0001891!1.93e-07!4;UBERON:0009616!1.93e-07!4;UBERON:0003076!3.53e-07!12;UBERON:0003057!3.53e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.14e-27,54;UBERON:0000955,2.53e-26,47;UBERON:0006238,2.53e-26,47;UBERON:0001017,1.38e-24,73;UBERON:0002616,3.16e-24,46;UBERON:0001016,8.59e-24,75;UBERON:0001049,3.36e-23,52;UBERON:0005068,3.36e-23,52;UBERON:0006241,3.36e-23,52;UBERON:0007135,3.36e-23,52;UBERON:0002346,6.30e-22,64;UBERON:0003075,6.30e-22,64;UBERON:0007284,6.30e-22,64;UBERON:0004121,5.06e-21,95;UBERON:0000924,5.06e-21,95;UBERON:0006601,5.06e-21,95;UBERON:0010371,1.29e-18,73;UBERON:0003080,8.20e-18,40;UBERON:0003056,9.41e-18,49;UBERON:0003528,6.15e-17,29;UBERON:0002791,6.15e-17,29;UBERON:0001893,6.15e-17,29;UBERON:0002021,1.03e-16,10;UBERON:0000411,1.03e-16,10;UBERON:0001950,1.03e-16,10;UBERON:0002780,6.43e-16,39;UBERON:0001890,6.43e-16,39;UBERON:0006240,6.43e-16,39;UBERON:0002020,5.14e-14,34;UBERON:0010314,9.60e-14,92;UBERON:0002950,7.89e-13,4;UBERON:0001891,7.89e-13,4;UBERON:0009616,7.89e-13,4;UBERON:0010286,7.89e-13,4;UBERON:0002619,4.93e-12,17;UBERON:0000956,7.97e-12,21;UBERON:0001869,7.97e-12,21;UBERON:0000203,7.97e-12,21;UBERON:0002038,8.11e-10,3;UBERON:0009663,8.11e-10,3;UBERON:0009661,8.11e-10,3;UBERON:0000125,8.11e-10,3;UBERON:0002308,8.11e-10,3;UBERON:0004684,1.82e-09,3;UBERON:0002275,1.82e-09,3;UBERON:0004733,2.74e-08,6;UBERON:0004732,2.74e-08,6;UBERON:0002028,2.74e-08,6;UBERON:0007277,2.74e-08,6;UBERON:0000025,4.69e-08,114;UBERON:0007023,2.19e-07,51;UBERON:0004111,3.17e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0.244981598429908,0,0,5.50579404996943,3.06449611404451,3.84016333140609,0.395658863190582,0.0914876436024097,0,5.58365998002762,7.87867654044352,3.0559649555362,0,0.569486723196412,0.372798891650601,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,8.49064311333487,11.9384622883669,0,0,0,0,8.68785708547972,8.23501085073528,0,4.69325664519146,4.85859368927628,5.194701113989,3.24482526135515,0,0,0,2.31486041475121,0,0,0,0,0,0,0.187403449119458,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67782861123144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,3.28192722458169,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0,0.292255857911312,0.395287777946524,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.33765543618917,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,0.460325236507177,1.71868654031819,1.20297227640581,0.685082519770642,3.0215755895588,2.70009000092722,2.2516060161211,4.53142408984205,4.14208249401456,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0.169229215783353,0,0,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr15:76351334..76351349,+ | |||
}} |
Revision as of 10:59, 13 September 2013
Short description: | p@chr15:76351334..76351349, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:76351334..76351349, + |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 8.11e-10 | 3 |
raphe nuclei neuron | 1.82e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.