FFCP PHASE1:Hg19::chr4:38080384..38080414,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2175|description=CAGE_peak_at_chr4:38080384..38080414,+|id=chr4:38080384..38080414,+|ontology_enrichment_celltype=CL:0002194!4.10e-54!63;CL:0000576!4.10e-54!63;CL:0000040!4.10e-54!63;CL:0000559!4.10e-54!63;CL:0002057!7.36e-54!42;CL:0002009!7.73e-52!65;CL:0000860!3.85e-49!45;CL:0000839!1.01e-46!70;CL:0000557!8.73e-46!71;CL:0000766!2.13e-45!76;CL:0002087!3.81e-40!119;CL:0000738!2.23e-37!140;CL:0002031!2.19e-33!124;CL:0000763!4.79e-32!112;CL:0000049!4.79e-32!112;CL:0000037!1.55e-28!172;CL:0000566!1.55e-28!172;CL:0002032!1.71e-27!165;CL:0000837!1.71e-27!165;CL:0000988!3.13e-27!182;CL:0002393!2.74e-13!9;CL:0002397!2.74e-13!9|ontology_enrichment_celltype_v019=CL:0000860;6.31e-64;33!CL:0002057;6.31e-64;33!CL:0000576;6.62e-61;48!CL:0000473;4.68e-58;39!CL:0000234;4.68e-58;39!CL:0000766;2.10e-44;69!CL:0002393;3.58e-19;6!CL:0002397;3.58e-19;6!CL:0002087;2.19e-18;104!CL:0000763;4.89e-18;100!CL:0000738;4.49e-13;136!CL:0000875;3.57e-11;3!CL:0002396;3.57e-11;3!CL:0002619;2.48e-10;3!CL:0000235;1.46e-08;6!CL:0000988;2.16e-07;177|ontology_enrichment_celltype_v019_2=CL:0000473,2.46e-103,48;CL:0000234,2.46e-103,48;CL:0000860,1.21e-96,42;CL:0002057,1.21e-96,42;CL:0002194,8.16e-94,59;CL:0000576,8.16e-94,59;CL:0000040,8.16e-94,59;CL:0000559,8.16e-94,59;CL:0002009,2.00e-90,61;CL:0000839,7.71e-83,66;CL:0000766,1.61e-82,72;CL:0000557,1.87e-81,67;CL:0000763,8.91e-60,108;CL:0000049,8.91e-60,108;CL:0000738,1.63e-56,136;CL:0002087,4.11e-55,115;CL:0002031,1.04e-47,120;CL:0000037,1.97e-43,168;CL:0002032,5.27e-42,161;CL:0000837,5.27e-42,161;CL:0000988,1.34e-40,177;CL:0002393,1.55e-28,9;CL:0002397,1.55e-28,9;CL:0000134,6.63e-15,354;CL:0002320,2.26e-14,361;CL:0000219,1.70e-12,386;CL:0000875,3.64e-11,3;CL:0002396,3.64e-11,3;CL:0000048,6.94e-11,427;CL:0000034,8.08e-11,441;CL:0000723,1.47e-10,433;CL:0002619,2.82e-10,3;CL:0000235,1.67e-08,6|ontology_enrichment_development_v019=CL:0002057;1.55e-68;42!CL:0000049;2.63e-17;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.20e-45!112;UBERON:0002390!5.50e-45!102;UBERON:0003061!5.50e-45!102;UBERON:0002371!1.98e-38!80;UBERON:0002405!2.69e-35!115;UBERON:0001474!2.13e-34!86;UBERON:0004765!1.47e-27!101;UBERON:0001434!1.47e-27!101;UBERON:0003081!4.92e-20!216;UBERON:0002204!8.42e-13!167;UBERON:0000926!4.56e-07!448;UBERON:0004120!4.56e-07!448;UBERON:0006603!4.56e-07!448|ontology_enrichment_uberon_v019=UBERON:0002106;2.90e-10;3|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.14e-71,93;UBERON:0002371,1.27e-70,76;UBERON:0002390,1.22e-69,98;UBERON:0003061,1.22e-69,98;UBERON:0002193,9.64e-68,108;UBERON:0001474,1.05e-64,82;UBERON:0004765,4.98e-58,90;UBERON:0001434,3.58e-51,100;UBERON:0003081,2.22e-30,203;UBERON:0002204,2.52e-26,167;UBERON:0000926,2.87e-15,315;UBERON:0004120,2.87e-15,315;UBERON:0006603,2.87e-15,315;UBERON:0002384,1.21e-13,371;UBERON:0002106,1.75e-10,3;UBERON:0004854,1.75e-10,3;UBERON:0009034,1.75e-10,3;UBERON:0002095,1.75e-10,3;UBERON:0004782,1.75e-10,3;UBERON:0003281,1.75e-10,3;UBERON:0009664,1.75e-10,3;UBERON:0002296,1.75e-10,3;UBERON:0005602,1.75e-10,3;UBERON:0001179,1.75e-10,3;UBERON:0006293,1.75e-10,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.821005894499457,0.314843125254717,1.57345710739562,0,2.01260960310899,0,0,0,0,0,0,1.10799081706375,2.60707781711184,2.17010870715852,3.13481663935894,3.88672399222775,2.06060454107349,0.581592955118259,3.02300754951048,3.15359279544161,3.48643555358527,4.52284676824008,1.23882548358041,2.01384674625505,2.30544635876191,1.89185783910868,2.75796544589295,3.22742341791913,6.77132432971709,1.50593871634084,1.63743690034707,2.69668181334102,3.36692281607993,4.49300637906531,6.39337125799041,0.329851300186716,0.997318288108159,1.27867425159808,10.447532590629,11.9150897185139,14.3249117268982,0.75374599577023,2.08593167368081,0.868755378820466,8.47559303686716,16.5724936194404,18.6712808590122,6.76016916198214,15.0949052975181,13.2084946670277,1.23561494261145,2.10247649978109,1.76798145366788,9.12040779971995,17.1068342391217,9.86386430329023,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,1.44833593950726,0,0,0,0.384273959177026,1.30059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451725357233318,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0,1.14152491340759,0,0,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2175 | |||
|description=CAGE_peak_at_chr4:38080384..38080414,+ | |||
|id=chr4:38080384..38080414,+ | |||
|ontology_enrichment_celltype=CL:0002194!4.10e-54!63;CL:0000576!4.10e-54!63;CL:0000040!4.10e-54!63;CL:0000559!4.10e-54!63;CL:0002057!7.36e-54!42;CL:0002009!7.73e-52!65;CL:0000860!3.85e-49!45;CL:0000839!1.01e-46!70;CL:0000557!8.73e-46!71;CL:0000766!2.13e-45!76;CL:0002087!3.81e-40!119;CL:0000738!2.23e-37!140;CL:0002031!2.19e-33!124;CL:0000763!4.79e-32!112;CL:0000049!4.79e-32!112;CL:0000037!1.55e-28!172;CL:0000566!1.55e-28!172;CL:0002032!1.71e-27!165;CL:0000837!1.71e-27!165;CL:0000988!3.13e-27!182;CL:0002393!2.74e-13!9;CL:0002397!2.74e-13!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.31e-64;33!CL:0002057;6.31e-64;33!CL:0000576;6.62e-61;48!CL:0000473;4.68e-58;39!CL:0000234;4.68e-58;39!CL:0000766;2.10e-44;69!CL:0002393;3.58e-19;6!CL:0002397;3.58e-19;6!CL:0002087;2.19e-18;104!CL:0000763;4.89e-18;100!CL:0000738;4.49e-13;136!CL:0000875;3.57e-11;3!CL:0002396;3.57e-11;3!CL:0002619;2.48e-10;3!CL:0000235;1.46e-08;6!CL:0000988;2.16e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.46e-103,48;CL:0000234,2.46e-103,48;CL:0000860,1.21e-96,42;CL:0002057,1.21e-96,42;CL:0002194,8.16e-94,59;CL:0000576,8.16e-94,59;CL:0000040,8.16e-94,59;CL:0000559,8.16e-94,59;CL:0002009,2.00e-90,61;CL:0000839,7.71e-83,66;CL:0000766,1.61e-82,72;CL:0000557,1.87e-81,67;CL:0000763,8.91e-60,108;CL:0000049,8.91e-60,108;CL:0000738,1.63e-56,136;CL:0002087,4.11e-55,115;CL:0002031,1.04e-47,120;CL:0000037,1.97e-43,168;CL:0002032,5.27e-42,161;CL:0000837,5.27e-42,161;CL:0000988,1.34e-40,177;CL:0002393,1.55e-28,9;CL:0002397,1.55e-28,9;CL:0000134,6.63e-15,354;CL:0002320,2.26e-14,361;CL:0000219,1.70e-12,386;CL:0000875,3.64e-11,3;CL:0002396,3.64e-11,3;CL:0000048,6.94e-11,427;CL:0000034,8.08e-11,441;CL:0000723,1.47e-10,433;CL:0002619,2.82e-10,3;CL:0000235,1.67e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-68;42!CL:0000049;2.63e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.20e-45!112;UBERON:0002390!5.50e-45!102;UBERON:0003061!5.50e-45!102;UBERON:0002371!1.98e-38!80;UBERON:0002405!2.69e-35!115;UBERON:0001474!2.13e-34!86;UBERON:0004765!1.47e-27!101;UBERON:0001434!1.47e-27!101;UBERON:0003081!4.92e-20!216;UBERON:0002204!8.42e-13!167;UBERON:0000926!4.56e-07!448;UBERON:0004120!4.56e-07!448;UBERON:0006603!4.56e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.90e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,5.14e-71,93;UBERON:0002371,1.27e-70,76;UBERON:0002390,1.22e-69,98;UBERON:0003061,1.22e-69,98;UBERON:0002193,9.64e-68,108;UBERON:0001474,1.05e-64,82;UBERON:0004765,4.98e-58,90;UBERON:0001434,3.58e-51,100;UBERON:0003081,2.22e-30,203;UBERON:0002204,2.52e-26,167;UBERON:0000926,2.87e-15,315;UBERON:0004120,2.87e-15,315;UBERON:0006603,2.87e-15,315;UBERON:0002384,1.21e-13,371;UBERON:0002106,1.75e-10,3;UBERON:0004854,1.75e-10,3;UBERON:0009034,1.75e-10,3;UBERON:0002095,1.75e-10,3;UBERON:0004782,1.75e-10,3;UBERON:0003281,1.75e-10,3;UBERON:0009664,1.75e-10,3;UBERON:0002296,1.75e-10,3;UBERON:0005602,1.75e-10,3;UBERON:0001179,1.75e-10,3;UBERON:0006293,1.75e-10,3 | |||
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|short_description=p@chr4:38080384..38080414,+ | |||
}} |
Revision as of 10:47, 13 September 2013
Short description: | p@chr4:38080384..38080414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:38080384..38080414, + |
Coexpression cluster: | C2175_CD14_CD14CD16_splenic_migratory_Peripheral_Basophils_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immune system | 5.14e-71 | 93 |
bone marrow | 1.27e-70 | 76 |
hematopoietic system | 1.22e-69 | 98 |
blood island | 1.22e-69 | 98 |
hemolymphoid system | 9.64e-68 | 108 |
bone element | 1.05e-64 | 82 |
skeletal element | 4.98e-58 | 90 |
skeletal system | 3.58e-51 | 100 |
lateral plate mesoderm | 2.22e-30 | 203 |
musculoskeletal system | 2.52e-26 | 167 |
mesoderm | 2.87e-15 | 315 |
mesoderm-derived structure | 2.87e-15 | 315 |
presumptive mesoderm | 2.87e-15 | 315 |
connective tissue | 1.21e-13 | 371 |
spleen | 1.75e-10 | 3 |
gastrointestinal system mesentery | 1.75e-10 | 3 |
stomach region | 1.75e-10 | 3 |
mesentery | 1.75e-10 | 3 |
gastrointestinal system serosa | 1.75e-10 | 3 |
mesentery of stomach | 1.75e-10 | 3 |
gut mesentery | 1.75e-10 | 3 |
dorsal mesentery | 1.75e-10 | 3 |
dorsal mesogastrium | 1.75e-10 | 3 |
peritoneal cavity | 1.75e-10 | 3 |
spleen primordium | 1.75e-10 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.