FFCP PHASE1:Hg19::chr4:3344141..3344178,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6002|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9994|TSSclassifier=N|UniProt=Q8WX95|association_with_transcript=0bp_to_ENST00000306648,ENST00000513784,uc003ggy.1_5end|description=CAGE_peak_10_at_RGS12_5end|id=chr4:3344141..3344178,+|ontology_enrichment_celltype=CL:0002139!7.63e-14!24;CL:0000071!4.00e-11!18;CL:0002546!4.00e-11!18;CL:1000413!4.41e-09!9;CL:0000115!3.72e-08!35|ontology_enrichment_celltype_v019=CL:0002545;7.10e-11;2!CL:1000413;5.67e-09;9!CL:0002544;5.74e-08;6!CL:0000222;9.78e-07;1|ontology_enrichment_celltype_v019_2=CL:0002545,2.32e-11,2;CL:1000413,4.03e-09,9;CL:0002544,4.19e-08,6|ontology_enrichment_development_v019=UBERON:0006215;1.52e-16;3!UBERON:0006601;5.05e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.06e-52!57;UBERON:0005068!7.06e-52!57;UBERON:0006241!7.06e-52!57;UBERON:0007135!7.06e-52!57;UBERON:0001017!1.72e-48!82;UBERON:0005743!1.83e-45!86;UBERON:0002616!7.73e-45!59;UBERON:0000955!1.02e-41!69;UBERON:0006238!1.02e-41!69;UBERON:0000073!1.38e-39!94;UBERON:0001016!1.38e-39!94;UBERON:0002780!6.57e-39!41;UBERON:0001890!6.57e-39!41;UBERON:0006240!6.57e-39!41;UBERON:0003080!9.77e-38!42;UBERON:0001893!2.91e-37!34;UBERON:0002020!4.97e-37!34;UBERON:0003528!4.97e-37!34;UBERON:0003075!7.63e-36!86;UBERON:0007284!7.63e-36!86;UBERON:0002791!8.79e-36!33;UBERON:0002346!4.53e-35!90;UBERON:0001869!3.75e-34!32;UBERON:0002619!1.82e-31!22;UBERON:0007023!1.34e-29!115;UBERON:0001950!5.86e-28!20;UBERON:0000956!5.35e-27!25;UBERON:0000203!5.35e-27!25;UBERON:0000025!1.67e-24!194;UBERON:0003056!3.46e-24!61;UBERON:0004111!2.05e-20!241;UBERON:0000033!2.24e-20!123;UBERON:0000153!9.17e-19!129;UBERON:0007811!9.17e-19!129;UBERON:0000924!2.19e-18!173;UBERON:0006601!2.19e-18!173;UBERON:0004121!2.25e-18!169;UBERON:0000477!1.91e-17!286;UBERON:0003076!8.60e-15!15;UBERON:0003057!8.60e-15!15;UBERON:0000119!3.74e-14!312;UBERON:0000483!7.39e-14!309;UBERON:0002420!8.56e-12!9;UBERON:0007245!8.56e-12!9;UBERON:0010009!8.56e-12!9;UBERON:0010011!8.56e-12!9;UBERON:0000454!8.56e-12!9;UBERON:0002308!2.20e-11!9;UBERON:0000125!2.20e-11!9;UBERON:0001986!4.00e-11!18;UBERON:0004638!4.00e-11!18;UBERON:0004852!4.00e-11!18;UBERON:0001871!4.78e-11!7;UBERON:0004733!7.10e-11!12;UBERON:0002028!7.10e-11!12;UBERON:0007277!7.10e-11!12;UBERON:0000349!4.11e-10!5;UBERON:0002298!5.62e-10!8;UBERON:0004732!7.17e-10!13;UBERON:0002021!1.24e-09!5;UBERON:0001872!4.06e-09!5;UBERON:0003915!4.41e-09!9;UBERON:0004700!4.41e-09!9;UBERON:0001917!4.41e-09!9;UBERON:0009663!1.22e-08!7;UBERON:0000487!1.51e-08!22;UBERON:0000200!7.57e-08!6;UBERON:0006914!3.56e-07!25;UBERON:0002680!6.87e-07!9;UBERON:0001895!6.87e-07!9;UBERON:0010092!6.87e-07!9;UBERON:0000467!9.26e-07!625|ontology_enrichment_uberon_v019=UBERON:0002619;1.12e-46;22!UBERON:0000956;6.61e-41;25!UBERON:0000203;6.61e-41;25!UBERON:0001950;5.05e-38;20!UBERON:0002791;6.17e-37;32!UBERON:0001893;2.09e-34;34!UBERON:0001869;2.43e-32;32!UBERON:0002780;3.40e-31;41!UBERON:0001890;3.40e-31;41!UBERON:0003528;2.57e-30;34!UBERON:0002020;2.57e-30;34!UBERON:0000073;6.90e-28;53!UBERON:0002616;6.90e-28;53!UBERON:0001017;3.28e-19;75!UBERON:0000349;3.40e-17;5!UBERON:0002021;1.28e-16;5!UBERON:0000955;4.20e-16;68!UBERON:0001016;8.27e-16;83!UBERON:0001954;7.12e-12;2!UBERON:0003022;7.12e-12;2!UBERON:0002421;7.12e-12;2!UBERON:0002600;7.12e-12;2!UBERON:0001871;9.23e-12;6!UBERON:0002771;7.10e-11;2!UBERON:0005800;7.10e-11;2!UBERON:0001515;7.10e-11;2!UBERON:0007023;1.22e-10;114!UBERON:0003915;5.67e-09;9!UBERON:0004700;5.67e-09;9!UBERON:0001917;5.67e-09;9!UBERON:0011216;1.27e-08;132!UBERON:0002037;1.68e-08;6!UBERON:0000200;3.83e-08;6!UBERON:0001870;9.05e-08;3!UBERON:0004733;4.33e-07;12!UBERON:0002028;4.33e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.11e-46,22;UBERON:0001049,8.38e-46,56;UBERON:0005068,8.38e-46,56;UBERON:0006241,8.38e-46,56;UBERON:0007135,8.38e-46,56;UBERON:0001017,4.13e-45,81;UBERON:0000073,1.54e-44,53;UBERON:0002616,1.54e-44,53;UBERON:0001893,1.15e-42,34;UBERON:0000956,1.15e-40,25;UBERON:0000203,1.15e-40,25;UBERON:0002791,1.74e-40,32;UBERON:0001016,4.35e-40,89;UBERON:0000955,1.06e-39,68;UBERON:0006238,1.06e-39,68;UBERON:0002780,5.08e-39,41;UBERON:0001890,5.08e-39,41;UBERON:0003080,5.08e-39,41;UBERON:0006240,5.08e-39,41;UBERON:0003528,5.92e-38,34;UBERON:0002020,5.92e-38,34;UBERON:0001950,8.69e-38,20;UBERON:0001869,8.06e-36,32;UBERON:0003075,9.21e-30,82;UBERON:0007284,9.21e-30,82;UBERON:0002346,3.81e-28,86;UBERON:0003056,4.86e-25,61;UBERON:0007023,2.57e-24,114;UBERON:0010371,2.14e-22,104;UBERON:0004121,9.13e-20,171;UBERON:0000924,9.13e-20,171;UBERON:0006601,9.13e-20,171;UBERON:0010314,3.04e-18,132;UBERON:0000349,2.73e-17,5;UBERON:0000025,2.86e-17,192;UBERON:0002021,3.25e-16,5;UBERON:0011216,5.39e-15,223;UBERON:0004111,1.50e-12,240;UBERON:0001954,7.75e-12,2;UBERON:0003022,7.75e-12,2;UBERON:0002421,7.75e-12,2;UBERON:0002600,7.75e-12,2;UBERON:0001871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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9994 | |||
|TSSclassifier=N | |||
|UniProt=Q8WX95 | |||
|association_with_transcript=0bp_to_ENST00000306648,ENST00000513784,uc003ggy.1_5end | |||
|description=CAGE_peak_10_at_RGS12_5end | |||
|id=chr4:3344141..3344178,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.63e-14!24;CL:0000071!4.00e-11!18;CL:0002546!4.00e-11!18;CL:1000413!4.41e-09!9;CL:0000115!3.72e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002545;7.10e-11;2!CL:1000413;5.67e-09;9!CL:0002544;5.74e-08;6!CL:0000222;9.78e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002545,2.32e-11,2;CL:1000413,4.03e-09,9;CL:0002544,4.19e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.52e-16;3!UBERON:0006601;5.05e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p10@RGS12 | |||
}} |
Revision as of 10:42, 13 September 2013
Short description: | p10@RGS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RGS12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306648, ENST00000513784, uc003ggy.1_5end |
EntrezGene: | RGS12 |
HGNC: | 9994 |
UniProt: | Q8WX95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic aorta endothelial cell | 2.32e-11 | 2 |
endothelial cell of artery | 4.03e-09 | 9 |
aortic endothelial cell | 4.19e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.