FFCP PHASE1:Hg19::chr4:25657354..25657366,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10568|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11020|TSSclassifier=S|UniProt=O95436|association_with_transcript=-68bp_to_NM_001177998,NM_006424,uc003grr.2,uc003grs.2_5end|coexpression_cluster_id=C95|description=CAGE_peak_3_at_SLC34A2_5end|id=chr4:25657354..25657366,+|ontology_enrichment_celltype=CL:0002605!1.72e-15!3;CL:0000128!6.73e-07!7;CL:0000126!6.73e-07!7;CL:0000127!6.73e-07!7;CL:0002453!6.73e-07!7|ontology_enrichment_celltype_v019=CL:0000047;3.52e-11;2|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;7.03e-07;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003127!3.89e-11!2;UBERON:0002171!9.91e-07!1;UBERON:0006518!9.91e-07!1;UBERON:0008949!9.91e-07!1;UBERON:0000101!9.91e-07!1;UBERON:0002167!9.91e-07!1|ontology_enrichment_uberon_v019=UBERON:0002171;1.53e-21;1!UBERON:0006518;1.53e-21;1!UBERON:0008949;1.53e-21;1!UBERON:0000101;1.53e-21;1!UBERON:0002167;1.53e-21;1!UBERON:0002048;6.84e-09;22!UBERON:0000117;6.84e-09;22!UBERON:0000171;6.84e-09;22!UBERON:0000170;6.84e-09;22|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.53e-21,1;UBERON:0006518,1.53e-21,1;UBERON:0008949,1.53e-21,1;UBERON:0000101,1.53e-21,1;UBERON:0002167,1.53e-21,1;UBERON:0002048,6.84e-09,22;UBERON:0000117,6.84e-09,22;UBERON:0000171,6.84e-09,22;UBERON:0000170,6.84e-09,22;UBERON:0005597,6.84e-09,22;UBERON:0000118,6.84e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38847790668105,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,2.79695391420225,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94118181690015,10.5326884416776,11.5986935497215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,1.52753179867596,0.202117188958219,0,0.342233301085281,0,0.430333232356058,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0,0|short_description=p3@SLC34A2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10568 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11020 | |||
|TSSclassifier=S | |||
|UniProt=O95436 | |||
|association_with_transcript=-68bp_to_NM_001177998,NM_006424,uc003grr.2,uc003grs.2_5end | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_3_at_SLC34A2_5end | |||
|id=chr4:25657354..25657366,+ | |||
|ontology_enrichment_celltype=CL:0002605!1.72e-15!3;CL:0000128!6.73e-07!7;CL:0000126!6.73e-07!7;CL:0000127!6.73e-07!7;CL:0002453!6.73e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000047;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.03e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.89e-11!2;UBERON:0002171!9.91e-07!1;UBERON:0006518!9.91e-07!1;UBERON:0008949!9.91e-07!1;UBERON:0000101!9.91e-07!1;UBERON:0002167!9.91e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.53e-21;1!UBERON:0006518;1.53e-21;1!UBERON:0008949;1.53e-21;1!UBERON:0000101;1.53e-21;1!UBERON:0002167;1.53e-21;1!UBERON:0002048;6.84e-09;22!UBERON:0000117;6.84e-09;22!UBERON:0000171;6.84e-09;22!UBERON:0000170;6.84e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.53e-21,1;UBERON:0006518,1.53e-21,1;UBERON:0008949,1.53e-21,1;UBERON:0000101,1.53e-21,1;UBERON:0002167,1.53e-21,1;UBERON:0002048,6.84e-09,22;UBERON:0000117,6.84e-09,22;UBERON:0000171,6.84e-09,22;UBERON:0000170,6.84e-09,22;UBERON:0005597,6.84e-09,22;UBERON:0000118,6.84e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38847790668105,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.0524545881349981,0,0,0,0,0,2.79695391420225,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94118181690015,10.5326884416776,11.5986935497215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678930119816101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,1.52753179867596,0.202117188958219,0,0.342233301085281,0,0.430333232356058,0.665320713092027,0,0,0,0,0,0.244482888365733,0,0,0,0 | |||
|short_description=p3@SLC34A2 | |||
}} |
Revision as of 10:35, 13 September 2013
Short description: | p3@SLC34A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SLC34A2_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -68bp_to_NM_001177998, NM_006424, uc003grr.2, uc003grs.2_5end |
EntrezGene: | SLC34A2 |
HGNC: | 11020 |
UniProt: | O95436 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.53e-21 | 1 |
right lung lobe | 1.53e-21 | 1 |
lower lobe of lung | 1.53e-21 | 1 |
lobe of lung | 1.53e-21 | 1 |
right lung | 1.53e-21 | 1 |
lung | 6.84e-09 | 22 |
respiratory tube | 6.84e-09 | 22 |
respiration organ | 6.84e-09 | 22 |
pair of lungs | 6.84e-09 | 22 |
lung primordium | 6.84e-09 | 22 |
lung bud | 6.84e-09 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.