FFCP PHASE1:Mm9::chr15:38230947..38230975,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:38230947..38230975,+|id=chr15:38230947..38230975,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000034,1.35e-15,97;CL:0000107,2.50e-15,9;CL:0000723,9.24e-13,91;CL:0000048,9.24e-13,91;CL:0002250,7.75e-08,3;CL:0002320,3.46e-07,46;CL:0000134,3.46e-07,46;CL:0000988,6.30e-07,32;CL:0002032,6.30e-07,32;CL:0000037,6.30e-07,32;CL:0000837,6.30e-07,32;CL:0000049,7.03e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.50e-15,9;UBERON:0000010,2.75e-12,11;UBERON:0000013,1.61e-07,3;UBERON:0000011,1.70e-07,3;UBERON:0002384,3.46e-07,46|phase1_expression=0.160148847104794,0.697950815278722,0,2.41971369045464,0,1.00727563147134,0.934450562382103,1.29123323441576,2.81577444303333,4.44722600011788,0.34243593645101,0,0.856003649656029,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0.443461021310609,1.90509202037889,5.53558308826113,0,1.44425809875637,3.32469290716985,2.04169356262369,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.629484089877886,0.304130793658544,0.183546752161682,0,0.436050312760893,0,0,0.419959264876088,0,0.335565212115473,0,0,0,0,0,0,0,0,0.677689064138264,0,1.7997994345628,0.988866362566974,1.4209602298922,0,1.53687322128622,0,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,1.17851434189467,0.142371680799103,0.186399445825301,0,0.151143120213571,6.66688324013859,0,0.679971333707751,0,0,0,0,0.511290967734173,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.502666365318702,0.247194967734374,0.722996784599558,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0.292780797011547,0.628340120440365,0,2.75574786363617,2.99951365496704,2.03312363316904,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0,0.452114453507145,0.612328492361951,0.640568601424249,0.937017245597288,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,1.40442637462647,2.05878325691772,0.568326998791185,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.930135779001631,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.405344047729279,0.292399974850665,0.439100230582101,0.134206418760372,0.210289948564127,0.514523061896422,0,0.264450566663544,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0,0.251335208800269,0.596869416123452,0.779856348476481,0,0,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.379419222745544,0.442830443938806,0.156998727841375,0.370191491765402,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.936113019343682,0,0.179397413521912,0.964887042726734,0.184753190166605,0.189491411770485,0,0.509235257325564,0,0,0.476087281772027,0.195133647857799,1.10344600874334,1.10732344824387,1.11618338060241,0.983179888294428,0.518054945597687,0.578596234326046,0,0.54390568381871,0.491764273019036,0.275936746304732,0.321101179975584,0,0,0.757412781613119,0.315508219416257,1.95219372148319,1.72338718186239,1.67278158566786,1.55959071857676,1.98153571552183,1.21443210502468,2.92255857911312,1.58115111178609,0,0.709700426041343,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,1.18120757152309,0.307435147943927,0,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0,0.258717367565509,0.643011105094777,0.354680467284547,0.535106452806212,0.329098041204242,0.913394847343798,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.361877549568935,0,0.492422699235184,0.291480836629851,0,0,0,0.185194527369712,0.376736914009382,0,0.457556346413045,4.41943917984024,4.47844647435706,4.00779924032829,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.539457385539283,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.810900861160657,0,0.129920822977795,0,0.596044064343795,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.46750760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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:38230947..38230975,+ | |||
|id=chr15:38230947..38230975,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.35e-15,97;CL:0000107,2.50e-15,9;CL:0000723,9.24e-13,91;CL:0000048,9.24e-13,91;CL:0002250,7.75e-08,3;CL:0002320,3.46e-07,46;CL:0000134,3.46e-07,46;CL:0000988,6.30e-07,32;CL:0002032,6.30e-07,32;CL:0000037,6.30e-07,32;CL:0000837,6.30e-07,32;CL:0000049,7.03e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.50e-15,9;UBERON:0000010,2.75e-12,11;UBERON:0000013,1.61e-07,3;UBERON:0000011,1.70e-07,3;UBERON:0002384,3.46e-07,46 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,2.41971369045464,0,1.00727563147134,0.934450562382103,1.29123323441576,2.81577444303333,4.44722600011788,0.34243593645101,0,0.856003649656029,0.0874204024189974,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,0.255129870453209,0.0992909512008853,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.190023419456374,0,0.443461021310609,1.90509202037889,5.53558308826113,0,1.44425809875637,3.32469290716985,2.04169356262369,0,0,1.0470474879476,0,0.683045484958446,0.485510353031154,0.629484089877886,0.304130793658544,0.183546752161682,0,0.436050312760893,0,0,0.419959264876088,0,0.335565212115473,0,0,0,0,0,0,0,0,0.677689064138264,0,1.7997994345628,0.988866362566974,1.4209602298922,0,1.53687322128622,0,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0.919218786610021,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,1.17851434189467,0.142371680799103,0.186399445825301,0,0.151143120213571,6.66688324013859,0,0.679971333707751,0,0,0,0,0.511290967734173,0.259786004602869,0.70667914902068,0.281686839553361,0,0,0,0.432982082022428,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0.346970653532272,0.608930956624282,0.691846491768175,0.150722640552623,0.23517741427141,0.502666365318702,0.247194967734374,0.722996784599558,0,0.647067399789637,0.662524555381181,0.484875253135222,0,0.292780797011547,0.628340120440365,0,2.75574786363617,2.99951365496704,2.03312363316904,0.149790639404823,0,0,0,0,0,0,0.101839363850316,0.248813941220186,0,0.210441855886474,0.260240885925407,0,0,0.452114453507145,0.612328492361951,0.640568601424249,0.937017245597288,0.517406741478031,0,0.189106080167819,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0.199034266818493,1.40442637462647,2.05878325691772,0.568326998791185,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.930135779001631,0.268273401399619,0.116765342367169,0.16455984991348,0.492502392237286,0.405344047729279,0.292399974850665,0.439100230582101,0.134206418760372,0.210289948564127,0.514523061896422,0,0.264450566663544,0.639864751605702,0.464473343720877,0.128867461322093,0.201683524623343,0.444756087689741,0,0,0,0.251335208800269,0.596869416123452,0.779856348476481,0,0,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.379419222745544,0.442830443938806,0.156998727841375,0.370191491765402,0,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.575392274901621,0.162135226775035,0.274561413188081,2.87536413054709,0.372140947668503,0.936113019343682,0,0.179397413521912,0.964887042726734,0.184753190166605,0.189491411770485,0,0.509235257325564,0,0,0.476087281772027,0.195133647857799,1.10344600874334,1.10732344824387,1.11618338060241,0.983179888294428,0.518054945597687,0.578596234326046,0,0.54390568381871,0.491764273019036,0.275936746304732,0.321101179975584,0,0,0.757412781613119,0.315508219416257,1.95219372148319,1.72338718186239,1.67278158566786,1.55959071857676,1.98153571552183,1.21443210502468,2.92255857911312,1.58115111178609,0,0.709700426041343,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,1.18120757152309,0.307435147943927,0,0.727067458955011,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,0,0.258717367565509,0.643011105094777,0.354680467284547,0.535106452806212,0.329098041204242,0.913394847343798,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.361877549568935,0,0.492422699235184,0.291480836629851,0,0,0,0.185194527369712,0.376736914009382,0,0.457556346413045,4.41943917984024,4.47844647435706,4.00779924032829,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.655087691238533,0.539457385539283,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.209718688851422,0.241584120826006,0.288030006257865,0.316011120628178,0.810900861160657,0,0.129920822977795,0,0.596044064343795,0.120195449519969,0.147689527174577,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.467507608726276,0.226730383615211,0.221985953374065,0,0,0.19318959403219,0.563047426353546,0.549454872801795,1.07184189539533,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.729320151204882,0,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.0640251524048693,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.70990322463735,0.238436189947321,0.145346416632329,0.658765662907314,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.1912883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| |||
|short_description=p@chr15:38230947..38230975,+ | |||
}} |
Revision as of 10:27, 13 September 2013
Short description: | p@chr15:38230947..38230975, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:38230947..38230975, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.35e-15 | 97 |
autonomic neuron | 2.50e-15 | 9 |
somatic stem cell | 9.24e-13 | 91 |
multi fate stem cell | 9.24e-13 | 91 |
intestinal crypt stem cell | 7.75e-08 | 3 |
connective tissue cell | 3.46e-07 | 46 |
mesenchymal cell | 3.46e-07 | 46 |
hematopoietic cell | 6.30e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.30e-07 | 32 |
hematopoietic stem cell | 6.30e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.30e-07 | 32 |
common myeloid progenitor | 7.03e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.50e-15 | 9 |
peripheral nervous system | 2.75e-12 | 11 |
sympathetic nervous system | 1.61e-07 | 3 |
parasympathetic nervous system | 1.70e-07 | 3 |
connective tissue | 3.46e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.