FFCP PHASE1:Mm9::chr15:101123897..101123911,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=77717|HGNC=|MCL_coexpression_id=1950|UniProt=|association_with_transcript=254bp_to_NR_033803,uc011zzr.1_5end|description=CAGE_peak_3_at_6030408B16Rik_5end|id=chr15:101123897..101123911,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,1.28e-16,3;CL:0000737,1.28e-16,3;CL:0000746,1.28e-16,3;CL:0000513,1.28e-16,3;CL:0000680,1.48e-08,6;CL:0000187,1.48e-08,6;CL:0000056,1.48e-08,6;CL:0000222,2.14e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000464!2.97e-19!57;UBERON:0000991!3.26e-16!18;UBERON:0005564!3.26e-16!18;UBERON:0003135!1.21e-15!15;UBERON:0002048!1.23e-15!14;UBERON:0000117!1.23e-15!14;UBERON:0000171!1.23e-15!14;UBERON:0000170!1.23e-15!14;UBERON:0005597!1.23e-15!14;UBERON:0000118!1.23e-15!14;UBERON:0004176!2.47e-15!17;UBERON:0009196!2.47e-15!17;UBERON:0009117!2.47e-15!17;UBERON:0000473!6.74e-15!14;UBERON:0003101!2.26e-14!16;UBERON:0000079!2.26e-14!16;UBERON:0005156!8.90e-14!26;UBERON:0000990!8.90e-14!26;UBERON:0003133!1.18e-13!24;UBERON:0005153!4.27e-12!17;UBERON:0005178!4.27e-12!17;UBERON:0005181!4.27e-12!17;UBERON:0002224!4.27e-12!17;UBERON:0000915!4.27e-12!17;UBERON:0008947!4.27e-12!17;UBERON:0003258!4.27e-12!17;UBERON:0000466!1.52e-11!79;UBERON:0000926!2.64e-11!193;UBERON:0004120!2.64e-11!193;UBERON:0006603!2.64e-11!193;UBERON:0003886!6.58e-10!38;UBERON:0002553!1.72e-09!39;UBERON:0002323!2.75e-09!37;UBERON:0004458!2.75e-09!37;UBERON:0003103!2.26e-08!43;UBERON:0005157!4.17e-08!27;UBERON:0000310!6.69e-08!6;UBERON:0001443!6.69e-08!6;UBERON:0009569!1.75e-07!66;UBERON:0007100!4.64e-07!18;UBERON:0000948!4.64e-07!18;UBERON:0005498!4.64e-07!18;UBERON:0004140!4.64e-07!18;UBERON:0009881!4.64e-07!18;UBERON:0004141!4.64e-07!18;UBERON:0003084!4.64e-07!18;UBERON:0007005!4.64e-07!18;UBERON:0004139!4.64e-07!18;UBERON:0004291!4.64e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.92e-41,14;UBERON:0003135,4.56e-38,15;UBERON:0003101,1.34e-35,16;UBERON:0000079,1.34e-35,16;UBERON:0004176,2.02e-33,17;UBERON:0009196,2.02e-33,17;UBERON:0009117,2.02e-33,17;UBERON:0000991,1.74e-31,18;UBERON:0005564,1.74e-31,18;UBERON:0003133,3.02e-23,24;UBERON:0005156,2.42e-21,26;UBERON:0000990,2.42e-21,26;UBERON:0002323,2.65e-17,37;UBERON:0004458,2.65e-17,37;UBERON:0003886,8.39e-17,38;UBERON:0002553,2.50e-16,39;UBERON:0001048,1.93e-08,134|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8048963135098,7.73640287834643,5.15672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0.16455984991348,0.492502392237286,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,0.228497025219458,0,0.814605311381257,0.775809948670503,0.420814919341911,0.442655759869801,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.977789858652155,1.69745085775188,2.11221223459652,0.837531287209079,0.476087281772027,0.390267295715598,0.945810864637146,1.55025282754142,0.637819074629948,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,1.12738587736838,3.13984746692355,2.15096037594227,2.13896307178452,2.32487682259916,2.02747350588934,2.46450201156083,4.55715346953825,1.15345278868282,1.20792060413003,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0.282328141245992,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0|short_description=p3@6030408B16Rik}} | ||
|EntrezGene=77717 | |||
|HGNC= | |||
|MCL_coexpression_id=1950 | |||
|UniProt= | |||
|association_with_transcript=254bp_to_NR_033803,uc011zzr.1_5end | |||
|description=CAGE_peak_3_at_6030408B16Rik_5end | |||
|id=chr15:101123897..101123911,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,1.28e-16,3;CL:0000737,1.28e-16,3;CL:0000746,1.28e-16,3;CL:0000513,1.28e-16,3;CL:0000680,1.48e-08,6;CL:0000187,1.48e-08,6;CL:0000056,1.48e-08,6;CL:0000222,2.14e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!2.97e-19!57;UBERON:0000991!3.26e-16!18;UBERON:0005564!3.26e-16!18;UBERON:0003135!1.21e-15!15;UBERON:0002048!1.23e-15!14;UBERON:0000117!1.23e-15!14;UBERON:0000171!1.23e-15!14;UBERON:0000170!1.23e-15!14;UBERON:0005597!1.23e-15!14;UBERON:0000118!1.23e-15!14;UBERON:0004176!2.47e-15!17;UBERON:0009196!2.47e-15!17;UBERON:0009117!2.47e-15!17;UBERON:0000473!6.74e-15!14;UBERON:0003101!2.26e-14!16;UBERON:0000079!2.26e-14!16;UBERON:0005156!8.90e-14!26;UBERON:0000990!8.90e-14!26;UBERON:0003133!1.18e-13!24;UBERON:0005153!4.27e-12!17;UBERON:0005178!4.27e-12!17;UBERON:0005181!4.27e-12!17;UBERON:0002224!4.27e-12!17;UBERON:0000915!4.27e-12!17;UBERON:0008947!4.27e-12!17;UBERON:0003258!4.27e-12!17;UBERON:0000466!1.52e-11!79;UBERON:0000926!2.64e-11!193;UBERON:0004120!2.64e-11!193;UBERON:0006603!2.64e-11!193;UBERON:0003886!6.58e-10!38;UBERON:0002553!1.72e-09!39;UBERON:0002323!2.75e-09!37;UBERON:0004458!2.75e-09!37;UBERON:0003103!2.26e-08!43;UBERON:0005157!4.17e-08!27;UBERON:0000310!6.69e-08!6;UBERON:0001443!6.69e-08!6;UBERON:0009569!1.75e-07!66;UBERON:0007100!4.64e-07!18;UBERON:0000948!4.64e-07!18;UBERON:0005498!4.64e-07!18;UBERON:0004140!4.64e-07!18;UBERON:0009881!4.64e-07!18;UBERON:0004141!4.64e-07!18;UBERON:0003084!4.64e-07!18;UBERON:0007005!4.64e-07!18;UBERON:0004139!4.64e-07!18;UBERON:0004291!4.64e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.92e-41,14;UBERON:0003135,4.56e-38,15;UBERON:0003101,1.34e-35,16;UBERON:0000079,1.34e-35,16;UBERON:0004176,2.02e-33,17;UBERON:0009196,2.02e-33,17;UBERON:0009117,2.02e-33,17;UBERON:0000991,1.74e-31,18;UBERON:0005564,1.74e-31,18;UBERON:0003133,3.02e-23,24;UBERON:0005156,2.42e-21,26;UBERON:0000990,2.42e-21,26;UBERON:0002323,2.65e-17,37;UBERON:0004458,2.65e-17,37;UBERON:0003886,8.39e-17,38;UBERON:0002553,2.50e-16,39;UBERON:0001048,1.93e-08,134 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8048963135098,7.73640287834643,5.15672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0.16455984991348,0.492502392237286,0.162137619091711,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.758671603812327,0.228497025219458,0,0.814605311381257,0.775809948670503,0.420814919341911,0.442655759869801,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.554259570499814,0.37898282354097,0.977789858652155,1.69745085775188,2.11221223459652,0.837531287209079,0.476087281772027,0.390267295715598,0.945810864637146,1.55025282754142,0.637819074629948,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.35613120733451,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619160603889667,0.370389054739423,0,0,0,0,0,0,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0.218362563746178,0,0.0826534557253359,0,0,0,1.12738587736838,3.13984746692355,2.15096037594227,2.13896307178452,2.32487682259916,2.02747350588934,2.46450201156083,4.55715346953825,1.15345278868282,1.20792060413003,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0,0,0.282328141245992,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0,0 | |||
|short_description=p3@6030408B16Rik | |||
}} |
Revision as of 03:25, 13 September 2013
Short description: | p3@6030408B16Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_6030408B16Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1950 |
Association with transcript: | 254bp_to_NR_033803, uc011zzr.1_5end |
EntrezGene: | 6030408B16Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 1.28e-16 | 3 |
striated muscle cell | 1.28e-16 | 3 |
cardiac muscle cell | 1.28e-16 | 3 |
cardiac muscle myoblast | 1.28e-16 | 3 |
muscle precursor cell | 1.48e-08 | 6 |
muscle cell | 1.48e-08 | 6 |
myoblast | 1.48e-08 | 6 |
mesodermal cell | 2.14e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.92e-41 | 14 |
male reproductive organ | 4.56e-38 | 15 |
male organism | 1.34e-35 | 16 |
male reproductive system | 1.34e-35 | 16 |
external genitalia | 2.02e-33 | 17 |
indifferent external genitalia | 2.02e-33 | 17 |
indifferent gonad | 2.02e-33 | 17 |
gonad | 1.74e-31 | 18 |
gonad primordium | 1.74e-31 | 18 |
reproductive organ | 3.02e-23 | 24 |
reproductive structure | 2.42e-21 | 26 |
reproductive system | 2.42e-21 | 26 |
body cavity | 2.65e-17 | 37 |
body cavity or lining | 2.65e-17 | 37 |
body cavity precursor | 8.39e-17 | 38 |
anatomical cavity | 2.50e-16 | 39 |
primordium | 1.93e-08 | 134 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.