FFCP PHASE1:Mm9::chr15:100253422..100253470,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18174|HGNC=|UniProt=P49282|association_with_transcript=0bp_to_ENSMUST00000138843_5end|description=CAGE_peak_1_at_Slc11a2_5end|id=chr15:100253422..100253470,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!7.64e-10!49;UBERON:0005173!7.64e-10!49;UBERON:0002417!7.64e-10!49;UBERON:0000916!7.64e-10!49;UBERON:0000480!6.87e-09!308;UBERON:0000467!6.87e-09!308;UBERON:0000160!4.89e-07!43;UBERON:0000923!6.02e-07!314;UBERON:0005291!6.02e-07!314;UBERON:0006598!6.02e-07!314;UBERON:0002532!6.02e-07!314|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.64e-10,49;UBERON:0005173,7.64e-10,49;UBERON:0002417,7.64e-10,49;UBERON:0000916,7.64e-10,49;UBERON:0003104,1.49e-07,61;UBERON:0009142,1.49e-07,61|phase1_expression=14.5735450865363,34.8975407639361,23.6599604482559,35.6907769342059,35.5635968261907,21.32066753281,19.8570744506197,10.7172358456508,12.1078301050433,12.6394844213876,7.53359060192222,9.33334260245436,13.353656934634,11.8891747289836,35.6427445142759,41.3049545475245,82.5483016191213,8.99067171270977,9.59801035240171,12.3072999021429,19.3898701544439,12.113496046508,10.1867917764185,15.9992422793407,19.9586074528438,31.5827580263261,30.1533397311352,32.1052136701975,29.8336768546507,27.9753444033523,27.2728528106025,19.0509202037889,20.9122027778754,63.3926724061755,13.2871745085586,16.1247605997738,11.0251452381679,0.418531630736908,0.7813353445238,3.14114246384279,0.588231488031014,0.683045484958446,0.971020706062307,63.2002026237398,71.2679826473187,48.4563425706839,20.342174953049,18.7501634487184,17.1355222532888,19.2485600083541,16.5183977517928,25.8754615856949,6.37573903019398,19.5847778343063,39.3229744996683,21.0952737549477,18.6246735960192,20.6268836910977,16.7922662513466,10.0508286061686,13.3104594736298,18.2976047317331,21.3430751066673,86.840322717655,86.0313735433268,79.5737728739632,34.1544125990981,22.6688800139717,15.8645106831971,15.5256829081444,12.6194976810829,17.424710048632,18.3320888989839,14.2089327089347,12.9391385874619,12.8690630125403,13.2139057199266,22.472971502993,20.4296689230804,19.5191705840687,17.0167017100482,13.022834263919,23.1721889171146,19.1339287410771,18.6413862287708,14.4368006882097,13.6676813567139,16.9623495701024,19.4616316866283,19.4974625075507,13.0439019915755,14.6272059086836,33.3185953516798,26.445456390253,33.7883737072788,18.8171292580881,21.487996280158,16.1908806449155,8.83272415649754,10.2468476607999,16.3378366940949,10.2661181931454,5.09610479413291,14.2213340630666,14.5048997477513,10.6411143499541,12.6381111253696,18.2694207550496,14.7594593678888,32.6572705942614,15.9606500624845,15.8322048722313,25.8289356926786,27.4315205805773,19.2845479702556,27.2696503185396,25.7082766443749,14.6045350489111,26.5383165584962,14.0737159454246,31.3594956213759,30.0622656943838,9.31958806090611,17.2740670236813,20.9446706813455,30.1439325146138,6.23038647430785,5.99902730993408,6.98886248901856,24.8652461412006,26.5350349634803,16.5863744788981,23.8139318663419,22.5029602450691,21.4021685896347,22.064811777215,10.8968119319838,25.0058010926287,15.1633655060205,13.8891624885073,13.1421647392331,10.3455946995063,10.9837899181263,10.5493372485001,12.7908618404496,13.0675994690547,13.6804517857204,14.7460921321239,13.3652155618362,12.2918952109083,12.3165786914764,10.9597866213787,11.3999372182495,11.8405736617537,12.1411460480687,13.5343301436575,3.51106593656617,6.94839349209731,7.10408748488982,10.9776659443816,9.14651633926275,8.10279276574567,8.99629995223799,11.215561209602,11.7243005794407,12.3242990717716,11.8040296615832,12.7274223180215,16.455984991348,19.3717607613332,18.2404821478175,18.2749984281665,24.1505126820156,16.1047702512446,22.5010244963616,16.9792610425819,26.7639214216876,28.8251117663263,11.7308537794379,15.3276203427889,11.8558064416326,22.7902382824377,29.3539017875229,36.3330945874988,23.2519240156811,30.139908714494,32.9249123528353,32.4299049427076,41.7223146434917,22.4704852163555,31.123879181956,31.6634624474444,16.311439481965,16.5660343284107,25.9227792048085,19.5505274731502,21.1408211012712,23.776042942818,31.1756128022588,38.6738587706558,46.0006272575228,38.1297236518364,22.2339470315362,37.206458574689,45.9948048564895,48.7950783875133,46.6578279193557,45.3413060334544,39.2123811743387,18.1248566594011,17.6727397184789,27.4561413188081,14.3768206527355,13.7692150637346,20.594486425561,19.9537313578218,26.1920223741992,20.2626278972614,15.7040211641614,13.0749074121634,13.2001630918041,10.1847051465113,11.7345124144251,9.71536293162531,9.28370199455454,10.9274842800367,14.029527825451,13.5093460685753,14.6698387164888,15.4031515832794,17.6138681503213,16.6346417368738,93.4905960423488,106.605514028467,41.7999632066181,33.1124095565679,22.9587343682543,25.9037827368769,8.6885521049638,18.935319540328,14.5133780931478,10.9322848403059,14.8642144435631,8.60287672629187,13.590719119026,10.4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| ||
|EntrezGene=18174 | |||
|HGNC= | |||
|UniProt=P49282 | |||
|association_with_transcript=0bp_to_ENSMUST00000138843_5end | |||
|description=CAGE_peak_1_at_Slc11a2_5end | |||
|id=chr15:100253422..100253470,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!7.64e-10!49;UBERON:0005173!7.64e-10!49;UBERON:0002417!7.64e-10!49;UBERON:0000916!7.64e-10!49;UBERON:0000480!6.87e-09!308;UBERON:0000467!6.87e-09!308;UBERON:0000160!4.89e-07!43;UBERON:0000923!6.02e-07!314;UBERON:0005291!6.02e-07!314;UBERON:0006598!6.02e-07!314;UBERON:0002532!6.02e-07!314 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,7.64e-10,49;UBERON:0005173,7.64e-10,49;UBERON:0002417,7.64e-10,49;UBERON:0000916,7.64e-10,49;UBERON:0003104,1.49e-07,61;UBERON:0009142,1.49e-07,61 | |||
|phase1_expression=14.5735450865363,34.8975407639361,23.6599604482559,35.6907769342059,35.5635968261907,21.32066753281,19.8570744506197,10.7172358456508,12.1078301050433,12.6394844213876,7.53359060192222,9.33334260245436,13.353656934634,11.8891747289836,35.6427445142759,41.3049545475245,82.5483016191213,8.99067171270977,9.59801035240171,12.3072999021429,19.3898701544439,12.113496046508,10.1867917764185,15.9992422793407,19.9586074528438,31.5827580263261,30.1533397311352,32.1052136701975,29.8336768546507,27.9753444033523,27.2728528106025,19.0509202037889,20.9122027778754,63.3926724061755,13.2871745085586,16.1247605997738,11.0251452381679,0.418531630736908,0.7813353445238,3.14114246384279,0.588231488031014,0.683045484958446,0.971020706062307,63.2002026237398,71.2679826473187,48.4563425706839,20.342174953049,18.7501634487184,17.1355222532888,19.2485600083541,16.5183977517928,25.8754615856949,6.37573903019398,19.5847778343063,39.3229744996683,21.0952737549477,18.6246735960192,20.6268836910977,16.7922662513466,10.0508286061686,13.3104594736298,18.2976047317331,21.3430751066673,86.840322717655,86.0313735433268,79.5737728739632,34.1544125990981,22.6688800139717,15.8645106831971,15.5256829081444,12.6194976810829,17.424710048632,18.3320888989839,14.2089327089347,12.9391385874619,12.8690630125403,13.2139057199266,22.472971502993,20.4296689230804,19.5191705840687,17.0167017100482,13.022834263919,23.1721889171146,19.1339287410771,18.6413862287708,14.4368006882097,13.6676813567139,16.9623495701024,19.4616316866283,19.4974625075507,13.0439019915755,14.6272059086836,33.3185953516798,26.445456390253,33.7883737072788,18.8171292580881,21.487996280158,16.1908806449155,8.83272415649754,10.2468476607999,16.3378366940949,10.2661181931454,5.09610479413291,14.2213340630666,14.5048997477513,10.6411143499541,12.6381111253696,18.2694207550496,14.7594593678888,32.6572705942614,15.9606500624845,15.8322048722313,25.8289356926786,27.4315205805773,19.2845479702556,27.2696503185396,25.7082766443749,14.6045350489111,26.5383165584962,14.0737159454246,31.3594956213759,30.0622656943838,9.31958806090611,17.2740670236813,20.9446706813455,30.1439325146138,6.23038647430785,5.99902730993408,6.98886248901856,24.8652461412006,26.5350349634803,16.5863744788981,23.8139318663419,22.5029602450691,21.4021685896347,22.064811777215,10.8968119319838,25.0058010926287,15.1633655060205,13.8891624885073,13.1421647392331,10.3455946995063,10.9837899181263,10.5493372485001,12.7908618404496,13.0675994690547,13.6804517857204,14.7460921321239,13.3652155618362,12.2918952109083,12.3165786914764,10.9597866213787,11.3999372182495,11.8405736617537,12.1411460480687,13.5343301436575,3.51106593656617,6.94839349209731,7.10408748488982,10.9776659443816,9.14651633926275,8.10279276574567,8.99629995223799,11.215561209602,11.7243005794407,12.3242990717716,11.8040296615832,12.7274223180215,16.455984991348,19.3717607613332,18.2404821478175,18.2749984281665,24.1505126820156,16.1047702512446,22.5010244963616,16.9792610425819,26.7639214216876,28.8251117663263,11.7308537794379,15.3276203427889,11.8558064416326,22.7902382824377,29.3539017875229,36.3330945874988,23.2519240156811,30.139908714494,32.9249123528353,32.4299049427076,41.7223146434917,22.4704852163555,31.123879181956,31.6634624474444,16.311439481965,16.5660343284107,25.9227792048085,19.5505274731502,21.1408211012712,23.776042942818,31.1756128022588,38.6738587706558,46.0006272575228,38.1297236518364,22.2339470315362,37.206458574689,45.9948048564895,48.7950783875133,46.6578279193557,45.3413060334544,39.2123811743387,18.1248566594011,17.6727397184789,27.4561413188081,14.3768206527355,13.7692150637346,20.594486425561,19.9537313578218,26.1920223741992,20.2626278972614,15.7040211641614,13.0749074121634,13.2001630918041,10.1847051465113,11.7345124144251,9.71536293162531,9.28370199455454,10.9274842800367,14.029527825451,13.5093460685753,14.6698387164888,15.4031515832794,17.6138681503213,16.6346417368738,93.4905960423488,106.605514028467,41.7999632066181,33.1124095565679,22.9587343682543,25.9037827368769,8.6885521049638,18.935319540328,14.5133780931478,10.9322848403059,14.8642144435631,8.60287672629187,13.590719119026,10.4738316391868,14.9779959619711,13.151513606009,11.4633455604492,22.1711708331047,20.5813123551989,13.8891170860459,12.8680697889325,20.2913251256219,27.8764790513922,14.3240575331439,19.9533547596736,16.4086419387631,23.6241514304618,12.912276213645,16.5394107627662,18.5402202033528,15.329387270543,26.2310509086727,39.0048851727495,27.8465966770104,14.2984634416591,10.9837267359099,15.1349660025823,10.502514716548,9.57637261668277,8.74007206250146,9.54384319492302,12.178597964584,17.6003781047783,23.9370240076117,20.9501978152214,7.25499512942512,10.9795810153216,11.8213332859185,10.8628833042854,12.1464265811345,27.6906794798358,24.4761398653873,35.0285305635598,15.4790150972417,24.2604830854322,54.4384840743557,48.799839296406,49.6448635858154,4.75939603982795,3.21888340344413,4.42239916174156,16.2294005062569,15.1841276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| |||
|short_description=p1@Slc11a2 | |||
}} | |||
Revision as of 03:18, 13 September 2013
| Short description: | p1@Slc11a2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Slc11a2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000138843_5end |
| EntrezGene: | Slc11a2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| abdomen element | 7.64e-10 | 49 |
| abdominal segment element | 7.64e-10 | 49 |
| abdominal segment of trunk | 7.64e-10 | 49 |
| abdomen | 7.64e-10 | 49 |
| mesenchyme | 1.49e-07 | 61 |
| entire embryonic mesenchyme | 1.49e-07 | 61 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
