FFCP PHASE1:Mm9::chr14:64224880..64224914,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=219149|HGNC=|UniProt=E9Q6C8|association_with_transcript=-425bp_to_ENSMUST00000119973_5end|description=CAGE_peak_1_at_Xkr6_5end|id=chr14:64224880..64224914,+|ontology_enrichment_celltype=CL:0000540!1.15e-10!33;CL:0000047!1.15e-10!33;CL:0000031!1.15e-10!33;CL:0000404!1.15e-10!33;CL:0000393!7.79e-10!39;CL:0000211!7.79e-10!39;CL:0002321!3.03e-08!70;CL:0000220!3.03e-08!70|ontology_enrichment_celltype_v019_2=CL:0000540,2.31e-11,33;CL:0000047,2.31e-11,33;CL:0000031,2.31e-11,33;CL:0000404,2.31e-11,33;CL:0000393,1.93e-10,39;CL:0000211,1.93e-10,39;CL:0002321,1.09e-08,70;CL:0000117,8.23e-07,23;CL:0000337,8.23e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.17e-16!102;UBERON:0000924!1.17e-16!102;UBERON:0006601!1.17e-16!102;UBERON:0002346!5.44e-14!71;UBERON:0003075!5.44e-14!71;UBERON:0007284!5.44e-14!71;UBERON:0001017!7.78e-14!73;UBERON:0005743!7.78e-14!73;UBERON:0000073!1.93e-13!75;UBERON:0001016!1.93e-13!75;UBERON:0000033!1.49e-09!63;UBERON:0001049!5.55e-09!52;UBERON:0005068!5.55e-09!52;UBERON:0006241!5.55e-09!52;UBERON:0007135!5.55e-09!52;UBERON:0003056!2.84e-07!49;UBERON:0002616!2.91e-07!49;UBERON:0000955!4.35e-07!50;UBERON:0006238!4.35e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.55e-15,95;UBERON:0000924,1.55e-15,95;UBERON:0006601,1.55e-15,95;UBERON:0001017,1.21e-14,73;UBERON:0001016,6.44e-14,75;UBERON:0002346,2.31e-13,64;UBERON:0003075,2.31e-13,64;UBERON:0007284,2.31e-13,64;UBERON:0010371,3.53e-12,73;UBERON:0000073,2.00e-10,54;UBERON:0001049,1.05e-09,52;UBERON:0005068,1.05e-09,52;UBERON:0006241,1.05e-09,52;UBERON:0007135,1.05e-09,52;UBERON:0010314,7.45e-08,92;UBERON:0003056,1.14e-07,49|phase1_expression=2.24208385946712,3.83872948403297,4.54999239389536,10.5862473957391,10.0179145989269,3.18970616632591,2.80335168714631,0.516493293766305,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0.522399578277871,1.91990907352088,0.22940928106717,2.8711598205751,2.58457197695445,2.37018355954478,0.950117097281869,1.00812051903972,0.221730510655305,0,0,0,2.3108129580102,0.166234645358492,2.04169356262369,0,0,0,0,0,0,3.65100772129174,4.1564541800001,2.0190142737785,0,0.436050312760893,0.439372365468944,0.388859798148567,0.279972843250725,0,0,1.45072428402269,0,1.02903774414379,0.85960031981627,0,6.27181028664753,4.23192783417626,5.07065122804943,0.338844532069132,1.77858959222228,0,0,0.7104801149461,0.898800331555214,1.53687322128622,1.97010263386108,0.675029691658453,0.630974884054146,8.85518051651791,5.30084498283872,1.34739879136449,1.43768206527355,0,6.60695285996332,3.83062014255563,3.99376986466233,4.2203612073662,3.7509933876988,5.73004707612436,6.42120897703176,2.25105044012672,5.19514042441154,15.3206864446307,12.8134512719193,9.31997229126503,1.13589289999776,0.906858721281426,11.3047150593654,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,0,0.702222100658759,0.852151612890289,0.259786004602869,0.35333957451034,3.94361575374705,7.69958864485907,15.2883143823987,14.2213340630666,1.08245520505607,0.506719730950197,1.01104889002957,1.1418387971906,0.258937883647172,3.56261133755579,1.90833859442749,2.13125834818499,2.7673859670727,3.46662073271032,3.99801604261396,2.01066546127481,3.21353458054686,1.44599356919912,0,0.485300549842228,0.220841518460394,0,5.59175283654366,16.1029438356351,24.7147114039877,1.27728527604296,0,0,0.127070227073065,11.3840885947665,7.77751024791665,5.78010019719176,4.86708096538374,5.11430914660661,6.44142938134636,6.00292673350703,0.203678727700633,0.497627882440372,2.27450482590307,5.6819301089348,1.82168620147785,1.83921683546778,2.16074555766419,1.50704817835715,3.81004395247436,3.45907044769094,4.77878795254617,5.95017752699736,0.862271971731369,1.13463648100692,1.75951124163949,0.657587197282725,1.39023624612799,0.348252166522167,1.64625709126355,0.398068533636986,0,0,0,1.44988040774851,0.703578179943289,0.720248245844059,0.710234206755631,0.393528463494808,0.462801338662135,0,0.804820204198858,0.467061369468678,0.658239399653922,0.492502392237286,0.243206428637567,0.292399974850665,0,0.402619256281115,4.41608891984667,2.26390147234426,2.31293148088659,1.85115396664481,1.70630600428187,2.09013004674395,2.31961430379768,2.8235693447268,1.33426826306922,2.09248188723815,0.949058123089023,0.988193728344065,1.00534083520108,4.37704238490532,1.9496408711912,5.39291645192533,1.51296634912286,2.19055400579804,0.379335801906163,0.456994050438915,0,0.610953983535943,0.581857461502877,0.701358198903186,1.07502113111237,0.590440591918409,0.784993639206874,1.23397163921801,1.77871576252289,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.810676133875177,0.549122826376163,1.43768206527355,1.48856379067401,0.936113019343682,1.26289438973556,0.717589654087649,2.8946611281802,1.10851914099963,0.37898282354097,1.14075483509418,0.509235257325564,1.40814148973101,1.00503754465089,0.2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| ||
|EntrezGene=219149 | |||
|HGNC= | |||
|UniProt=E9Q6C8 | |||
|association_with_transcript=-425bp_to_ENSMUST00000119973_5end | |||
|description=CAGE_peak_1_at_Xkr6_5end | |||
|id=chr14:64224880..64224914,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.15e-10!33;CL:0000047!1.15e-10!33;CL:0000031!1.15e-10!33;CL:0000404!1.15e-10!33;CL:0000393!7.79e-10!39;CL:0000211!7.79e-10!39;CL:0002321!3.03e-08!70;CL:0000220!3.03e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.31e-11,33;CL:0000047,2.31e-11,33;CL:0000031,2.31e-11,33;CL:0000404,2.31e-11,33;CL:0000393,1.93e-10,39;CL:0000211,1.93e-10,39;CL:0002321,1.09e-08,70;CL:0000117,8.23e-07,23;CL:0000337,8.23e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.17e-16!102;UBERON:0000924!1.17e-16!102;UBERON:0006601!1.17e-16!102;UBERON:0002346!5.44e-14!71;UBERON:0003075!5.44e-14!71;UBERON:0007284!5.44e-14!71;UBERON:0001017!7.78e-14!73;UBERON:0005743!7.78e-14!73;UBERON:0000073!1.93e-13!75;UBERON:0001016!1.93e-13!75;UBERON:0000033!1.49e-09!63;UBERON:0001049!5.55e-09!52;UBERON:0005068!5.55e-09!52;UBERON:0006241!5.55e-09!52;UBERON:0007135!5.55e-09!52;UBERON:0003056!2.84e-07!49;UBERON:0002616!2.91e-07!49;UBERON:0000955!4.35e-07!50;UBERON:0006238!4.35e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.55e-15,95;UBERON:0000924,1.55e-15,95;UBERON:0006601,1.55e-15,95;UBERON:0001017,1.21e-14,73;UBERON:0001016,6.44e-14,75;UBERON:0002346,2.31e-13,64;UBERON:0003075,2.31e-13,64;UBERON:0007284,2.31e-13,64;UBERON:0010371,3.53e-12,73;UBERON:0000073,2.00e-10,54;UBERON:0001049,1.05e-09,52;UBERON:0005068,1.05e-09,52;UBERON:0006241,1.05e-09,52;UBERON:0007135,1.05e-09,52;UBERON:0010314,7.45e-08,92;UBERON:0003056,1.14e-07,49 | |||
|phase1_expression=2.24208385946712,3.83872948403297,4.54999239389536,10.5862473957391,10.0179145989269,3.18970616632591,2.80335168714631,0.516493293766305,0,0.234064526321993,0.171217968225505,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0.522399578277871,1.91990907352088,0.22940928106717,2.8711598205751,2.58457197695445,2.37018355954478,0.950117097281869,1.00812051903972,0.221730510655305,0,0,0,2.3108129580102,0.166234645358492,2.04169356262369,0,0,0,0,0,0,3.65100772129174,4.1564541800001,2.0190142737785,0,0.436050312760893,0.439372365468944,0.388859798148567,0.279972843250725,0,0,1.45072428402269,0,1.02903774414379,0.85960031981627,0,6.27181028664753,4.23192783417626,5.07065122804943,0.338844532069132,1.77858959222228,0,0,0.7104801149461,0.898800331555214,1.53687322128622,1.97010263386108,0.675029691658453,0.630974884054146,8.85518051651791,5.30084498283872,1.34739879136449,1.43768206527355,0,6.60695285996332,3.83062014255563,3.99376986466233,4.2203612073662,3.7509933876988,5.73004707612436,6.42120897703176,2.25105044012672,5.19514042441154,15.3206864446307,12.8134512719193,9.31997229126503,1.13589289999776,0.906858721281426,11.3047150593654,0.860423876981386,0.679971333707751,1.07940638327563,1.29955283489534,0,0.702222100658759,0.852151612890289,0.259786004602869,0.35333957451034,3.94361575374705,7.69958864485907,15.2883143823987,14.2213340630666,1.08245520505607,0.506719730950197,1.01104889002957,1.1418387971906,0.258937883647172,3.56261133755579,1.90833859442749,2.13125834818499,2.7673859670727,3.46662073271032,3.99801604261396,2.01066546127481,3.21353458054686,1.44599356919912,0,0.485300549842228,0.220841518460394,0,5.59175283654366,16.1029438356351,24.7147114039877,1.27728527604296,0,0,0.127070227073065,11.3840885947665,7.77751024791665,5.78010019719176,4.86708096538374,5.11430914660661,6.44142938134636,6.00292673350703,0.203678727700633,0.497627882440372,2.27450482590307,5.6819301089348,1.82168620147785,1.83921683546778,2.16074555766419,1.50704817835715,3.81004395247436,3.45907044769094,4.77878795254617,5.95017752699736,0.862271971731369,1.13463648100692,1.75951124163949,0.657587197282725,1.39023624612799,0.348252166522167,1.64625709126355,0.398068533636986,0,0,0,1.44988040774851,0.703578179943289,0.720248245844059,0.710234206755631,0.393528463494808,0.462801338662135,0,0.804820204198858,0.467061369468678,0.658239399653922,0.492502392237286,0.243206428637567,0.292399974850665,0,0.402619256281115,4.41608891984667,2.26390147234426,2.31293148088659,1.85115396664481,1.70630600428187,2.09013004674395,2.31961430379768,2.8235693447268,1.33426826306922,2.09248188723815,0.949058123089023,0.988193728344065,1.00534083520108,4.37704238490532,1.9496408711912,5.39291645192533,1.51296634912286,2.19055400579804,0.379335801906163,0.456994050438915,0,0.610953983535943,0.581857461502877,0.701358198903186,1.07502113111237,0.590440591918409,0.784993639206874,1.23397163921801,1.77871576252289,0.667380422864376,0.196558995113203,0.224862112384854,0.405720242777006,0.482354319504834,0.25462585178142,0.575392274901621,0.810676133875177,0.549122826376163,1.43768206527355,1.48856379067401,0.936113019343682,1.26289438973556,0.717589654087649,2.8946611281802,1.10851914099963,0.37898282354097,1.14075483509418,0.509235257325564,1.40814148973101,1.00503754465089,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.478364305972461,0.81931657357869,0.690739927463582,0.723245292907558,1.50791283939272,0,0,0,10.2752377592187,10.1974167335217,0.163934945376675,1.00988370881749,3.47059041357882,4.29482618726302,5.81643173878557,5.01834475700359,5.56996685205985,5.09537755419898,5.66734982344852,7.89090816360542,6.32460444714438,0.963963949265421,0.709700426041343,0,0.325773918707152,1.31976098378028,7.96470830039777,1.45668381692989,0.604647113929502,1.50884063804718,0.885905678642318,2.45948118355142,3.35956781118687,1.81766864738753,1.78248689192361,0.632073515871632,3.16255825724996,3.09406629744561,13.9580238359053,1.98067203434441,0.776152102696527,1.07168517515796,1.06404140185364,2.67553226403106,2.79733335023606,1.2178597964584,0.704015124191131,2.96564899209348,0.882113592219848,0.98931751764888,1.29171541356724,1.80938774784468,1.67121281604391,1.47726809770555,1.45740418314925,8.90041449650446,0.170870880797853,0.206386867963223,0.555583582109135,0,0.136694227721025,0,0.849892149969277,0.419854356970974,0.138199973804424,0,1.42351197111511,1.42323626988794,0.648032044930808,1.04544148007234,2.18362563746178,0.944050424693745,1.40510874733071,0.523511883968059,2.98114438571124,4.34937519160848,1.12738587736838,0.149516546043979,0.827292452285488,1.75006069509643,1.54991788173277,1.520605129417,0.938857909166032,2.21347454234715,5.03324853243412,5.79801889982414,5.47257011889944,0.316011120628178,0.608175645870493,0.616265742988964,0.649604114888975,0.358053391334963,0.39736270956253,0.721172697119813,0.147689527174577,0.403865799792591,0.381034033274999,0.201652370273681,0.0974578807397524,0.288635524920988,0,0.4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| |||
|short_description=p1@Xkr6 | |||
}} |
Revision as of 02:45, 13 September 2013
Short description: | p1@Xkr6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Xkr6_5end |
Coexpression cluster: | NA |
Association with transcript: | -425bp_to_ENSMUST00000119973_5end |
EntrezGene: | Xkr6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.31e-11 | 33 |
neuronal stem cell | 2.31e-11 | 33 |
neuroblast | 2.31e-11 | 33 |
electrically signaling cell | 2.31e-11 | 33 |
electrically responsive cell | 1.93e-10 | 39 |
electrically active cell | 1.93e-10 | 39 |
embryonic cell | 1.09e-08 | 70 |
CNS neuron (sensu Vertebrata) | 8.23e-07 | 23 |
neuroblast (sensu Vertebrata) | 8.23e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.55e-15 | 95 |
ectoderm | 1.55e-15 | 95 |
presumptive ectoderm | 1.55e-15 | 95 |
central nervous system | 1.21e-14 | 73 |
nervous system | 6.44e-14 | 75 |
neurectoderm | 2.31e-13 | 64 |
neural plate | 2.31e-13 | 64 |
presumptive neural plate | 2.31e-13 | 64 |
ecto-epithelium | 3.53e-12 | 73 |
regional part of nervous system | 2.00e-10 | 54 |
neural tube | 1.05e-09 | 52 |
neural rod | 1.05e-09 | 52 |
future spinal cord | 1.05e-09 | 52 |
neural keel | 1.05e-09 | 52 |
structure with developmental contribution from neural crest | 7.45e-08 | 92 |
pre-chordal neural plate | 1.14e-07 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.