FFCP PHASE1:Mm9::chr14:60870191..60870202,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71844|HGNC=|MCL_coexpression_id=7|UniProt=Q8R332|association_with_transcript=12bp_to_NM_170591,uc007uex.1,uc007uey.1,uc007uez.1_5end|description=CAGE_peak_3_at_Nupl1_5end|id=chr14:60870191..60870202,-|ontology_enrichment_celltype=CL:0000838!6.21e-07!12;CL:0000791!8.33e-07!9;CL:0000789!8.33e-07!9;CL:0002420!8.33e-07!9;CL:0002419!8.33e-07!9;CL:0000790!8.33e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.71e-09,9;CL:0000789,2.71e-09,9;CL:0002420,2.71e-09,9;CL:0002419,2.71e-09,9;CL:0000790,2.71e-09,9;CL:0000624,1.18e-08,8;CL:0000838,6.73e-08,12;CL:0000893,2.97e-07,6;CL:0002489,2.97e-07,6;CL:0000898,2.97e-07,6;CL:0000809,2.97e-07,6;CL:0000810,2.97e-07,6;CL:0000895,2.97e-07,6;CL:0000808,2.97e-07,6;CL:0000894,2.97e-07,6;CL:0000806,2.97e-07,6;CL:0000807,2.97e-07,6;CL:0000805,2.97e-07,6;CL:0002425,2.97e-07,6;CL:0002436,2.97e-07,6;CL:0002427,2.97e-07,6;CL:0002428,2.97e-07,6;CL:0002429,2.97e-07,6;CL:0002433,2.97e-07,6;CL:0002431,2.97e-07,6;CL:0002432,2.97e-07,6;CL:0000084,5.06e-07,11;CL:0000827,5.06e-07,11;CL:0000542,5.11e-07,13;CL:0000051,5.11e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.28e-08,10;UBERON:0000411,1.28e-08,10;UBERON:0001950,1.28e-08,10|phase1_expression=1.92178616525753,3.14077866875425,1.36499771816861,0,0.500895729946347,1.84667199103079,1.16806320297763,4.26106967357202,18.3025338797167,20.3636137900134,4.96532107853964,3.98860794976682,3.42401459862411,2.36035086531293,0.333109761815663,1.61980213911861,1.39912375625629,0.157731082679119,0.685572168028694,0.42438965179803,0.340173160604279,0.893618560807968,0.783599367416806,0.639969691173627,1.14704640533585,1.72269589234506,0,0.430942465371778,0,0.756090389279792,1.33038306393183,2.54012269383853,0,0,0,0.332469290716985,1.22501613757421,2.92972141515835,0.7813353445238,1.57057123192139,2.35292595212406,0.683045484958446,1.45653105909346,0.629484089877886,0.709638518536602,0.734187008646726,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,3.35565212115473,1.45072428402269,2.01656279485478,0.257259436035947,0.573066879877513,0,1.21389876515759,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0,0,0,0,0.768436610643109,0.622137673850866,0.810035629990144,0.841299845405528,0.856952953211411,0.220868540951614,0.244981598429908,0.479227355091182,0,2.20231761998777,1.40456071893706,0.614426133024974,0.923204014111357,1.18933936683133,0,0.837548997004143,0,0.61119299110724,2.65165726926301,1.99320353118744,1.1183966749518,1.06016670666458,0.604572480854284,2.02905142091174,0.860423876981386,2.03991400112325,0,0,0.448026887097336,0.421333260395256,1.02258193546835,1.29893002301434,0.70667914902068,0.563373679106722,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.45673551887624,0.776813650941515,0.148442139064825,0.520455980298408,0.608930956624282,0,0.301445281105245,0.587943535678524,0,5.6854842578906,0.578397427679647,0.884610551949874,0.970601099684455,0.883366073841574,1.93950101254089,0,0.292780797011547,0.628340120440365,1.02182822083437,2.63593273913025,3.59941638596045,2.79554499560742,0.599162557619291,0.915001205637253,1.00523481690292,1.56441888173049,1.79000820131231,0.62336413367868,1.29793010454206,0.81471491080253,0.870848794270651,2.27450482590307,0,0.650602214813519,1.37941262660084,1.80062129805349,1.20563854268572,2.24520447199382,2.8185018462667,2.34254311399322,0.776110112217047,0.431135985865684,0.567318240503458,0.527853372491847,1.53437012699302,1.11218899690239,2.78601733217733,0.61734640922383,0.59710280045548,0.702213187313235,1.80143534980301,1.42081749697796,0.621377317606506,0.938104239924385,1.2604344302271,0.710234206755631,0.196764231747404,0.771335564436891,0.465067889500816,0,0.583826711835847,0.493679549740441,0.32833492815819,0.486412857275134,0.584799949701329,1.3173006917463,0.268412837520744,1.05144974282064,1.3377599609307,0,0,0.213288250535234,0.928946687441754,0.644337306610467,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,1.32767530667157,1.02823661348756,0,0.610953983535943,0.969762435838129,0.911765658574141,0.442655759869801,0.147610147979602,0.31399745568275,0.123397163921801,1.1858105083486,0.166845105716094,0.589676985339609,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.936113019343682,0.757736633841335,0.179397413521912,0.482443521363367,0.369506380333209,0.568474235311454,1.14075483509418,1.01847051465113,0.704070744865506,0.670025029767263,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0.345369963731791,0,0,1.08781136763742,0,0.827810238914197,0.642202359951168,0.703270119553219,1.14754461763673,1.00988370881749,1.26203287766503,0.780877488593277,1.50796378412959,0,0.8911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| ||
|EntrezGene=71844 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|UniProt=Q8R332 | |||
|association_with_transcript=12bp_to_NM_170591,uc007uex.1,uc007uey.1,uc007uez.1_5end | |||
|description=CAGE_peak_3_at_Nupl1_5end | |||
|id=chr14:60870191..60870202,- | |||
|ontology_enrichment_celltype=CL:0000838!6.21e-07!12;CL:0000791!8.33e-07!9;CL:0000789!8.33e-07!9;CL:0002420!8.33e-07!9;CL:0002419!8.33e-07!9;CL:0000790!8.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.71e-09,9;CL:0000789,2.71e-09,9;CL:0002420,2.71e-09,9;CL:0002419,2.71e-09,9;CL:0000790,2.71e-09,9;CL:0000624,1.18e-08,8;CL:0000838,6.73e-08,12;CL:0000893,2.97e-07,6;CL:0002489,2.97e-07,6;CL:0000898,2.97e-07,6;CL:0000809,2.97e-07,6;CL:0000810,2.97e-07,6;CL:0000895,2.97e-07,6;CL:0000808,2.97e-07,6;CL:0000894,2.97e-07,6;CL:0000806,2.97e-07,6;CL:0000807,2.97e-07,6;CL:0000805,2.97e-07,6;CL:0002425,2.97e-07,6;CL:0002436,2.97e-07,6;CL:0002427,2.97e-07,6;CL:0002428,2.97e-07,6;CL:0002429,2.97e-07,6;CL:0002433,2.97e-07,6;CL:0002431,2.97e-07,6;CL:0002432,2.97e-07,6;CL:0000084,5.06e-07,11;CL:0000827,5.06e-07,11;CL:0000542,5.11e-07,13;CL:0000051,5.11e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.28e-08,10;UBERON:0000411,1.28e-08,10;UBERON:0001950,1.28e-08,10 | |||
|phase1_expression=1.92178616525753,3.14077866875425,1.36499771816861,0,0.500895729946347,1.84667199103079,1.16806320297763,4.26106967357202,18.3025338797167,20.3636137900134,4.96532107853964,3.98860794976682,3.42401459862411,2.36035086531293,0.333109761815663,1.61980213911861,1.39912375625629,0.157731082679119,0.685572168028694,0.42438965179803,0.340173160604279,0.893618560807968,0.783599367416806,0.639969691173627,1.14704640533585,1.72269589234506,0,0.430942465371778,0,0.756090389279792,1.33038306393183,2.54012269383853,0,0,0,0.332469290716985,1.22501613757421,2.92972141515835,0.7813353445238,1.57057123192139,2.35292595212406,0.683045484958446,1.45653105909346,0.629484089877886,0.709638518536602,0.734187008646726,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,3.35565212115473,1.45072428402269,2.01656279485478,0.257259436035947,0.573066879877513,0,1.21389876515759,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0,0,0,0,0.768436610643109,0.622137673850866,0.810035629990144,0.841299845405528,0.856952953211411,0.220868540951614,0.244981598429908,0.479227355091182,0,2.20231761998777,1.40456071893706,0.614426133024974,0.923204014111357,1.18933936683133,0,0.837548997004143,0,0.61119299110724,2.65165726926301,1.99320353118744,1.1183966749518,1.06016670666458,0.604572480854284,2.02905142091174,0.860423876981386,2.03991400112325,0,0,0.448026887097336,0.421333260395256,1.02258193546835,1.29893002301434,0.70667914902068,0.563373679106722,0,0,0,0.649473123033642,1.01343946190039,0.505524445014783,0.45673551887624,0.776813650941515,0.148442139064825,0.520455980298408,0.608930956624282,0,0.301445281105245,0.587943535678524,0,5.6854842578906,0.578397427679647,0.884610551949874,0.970601099684455,0.883366073841574,1.93950101254089,0,0.292780797011547,0.628340120440365,1.02182822083437,2.63593273913025,3.59941638596045,2.79554499560742,0.599162557619291,0.915001205637253,1.00523481690292,1.56441888173049,1.79000820131231,0.62336413367868,1.29793010454206,0.81471491080253,0.870848794270651,2.27450482590307,0,0.650602214813519,1.37941262660084,1.80062129805349,1.20563854268572,2.24520447199382,2.8185018462667,2.34254311399322,0.776110112217047,0.431135985865684,0.567318240503458,0.527853372491847,1.53437012699302,1.11218899690239,2.78601733217733,0.61734640922383,0.59710280045548,0.702213187313235,1.80143534980301,1.42081749697796,0.621377317606506,0.938104239924385,1.2604344302271,0.710234206755631,0.196764231747404,0.771335564436891,0.465067889500816,0,0.583826711835847,0.493679549740441,0.32833492815819,0.486412857275134,0.584799949701329,1.3173006917463,0.268412837520744,1.05144974282064,1.3377599609307,0,0,0.213288250535234,0.928946687441754,0.644337306610467,0.605050573870028,0.667134131534611,0,0,0.329397909448022,0,0.397912944082302,0.58489226135736,0.898819408654221,0.648414149624083,0.995706366271836,1.32767530667157,1.02823661348756,0,0.610953983535943,0.969762435838129,0.911765658574141,0.442655759869801,0.147610147979602,0.31399745568275,0.123397163921801,1.1858105083486,0.166845105716094,0.589676985339609,0.449724224769707,1.01430060694251,0.482354319504834,0.763877555344259,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0.936113019343682,0.757736633841335,0.179397413521912,0.482443521363367,0.369506380333209,0.568474235311454,1.14075483509418,1.01847051465113,0.704070744865506,0.670025029767263,0.238043640886014,0.585400943573396,0.315270288212382,0.221464689648775,0.318909537314974,0.327726629431476,0.345369963731791,0,0,1.08781136763742,0,0.827810238914197,0.642202359951168,0.703270119553219,1.14754461763673,1.00988370881749,1.26203287766503,0.780877488593277,1.50796378412959,0,0.891194696329576,0.849229592366497,1.61924280669958,0.292255857911312,0.395287777946524,1.92792789853084,0.709700426041343,0.534196811001766,0.488660878060728,0.329940245945071,1.32745138339963,0.971122544619926,0,0.943025398779491,0.295301892880773,0.307435147943927,2.32585463851399,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,2.04263763452273,0.36012218806262,1.03486947026204,0.428674070063185,1.59606210278046,0.356737635204141,0.822745103010605,0.608929898229199,1.17335854031855,1.27099242518292,0.220528398054962,0.32977250588296,0.161464426695906,1.08563264870681,0.358117032009409,0.820704498725306,0,0.927126510052548,0.512612642393558,0.82554747185289,0.370389054739423,0.753473828018764,0.956859594047176,0.457556346413045,2.20971958992012,2.93898049879682,4.14599921413271,2.86401185404534,0,0.609958401380546,0.216010681643603,0.836353184057875,0.218362563746178,0.944050424693745,1.23980183588004,1.30877970992015,0.648074866458964,0,0.56369293868419,0.747582730219894,0.496375471371293,0.388902376688095,0.516639293910924,0.168956125490778,0.58678619322877,0.781226309063701,0.943734099831398,0.724752362478018,0.288030006257865,0.316011120628178,0,0.410843828659309,0.77952493786677,0.895133478337407,0.39736270956253,1.08175904567972,1.9199638532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| |||
|short_description=p3@Nupl1 | |||
}} | |||
Revision as of 02:39, 13 September 2013
| Short description: | p3@Nupl1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Nupl1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:7 |
| Association with transcript: | 12bp_to_NM_170591, uc007uex.1, uc007uey.1, uc007uez.1_5end |
| EntrezGene: | Nupl1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 1.28e-08 | 10 |
| visual cortex | 1.28e-08 | 10 |
| neocortex | 1.28e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
