FFCP PHASE1:Mm9::chr14:60796214..60796222,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=574|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:60796214..60796222,+|id=chr14:60796214..60796222,+|ontology_enrichment_celltype=CL:0002563!2.18e-09!9;CL:0002251!2.18e-09!9;CL:0000239!8.21e-07!6;CL:0000677!8.21e-07!6;CL:0000212!8.21e-07!6;CL:0000584!8.21e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-16,9;CL:0002251,2.65e-16,9;CL:0000239,4.84e-13,6;CL:0000677,4.84e-13,6;CL:0000584,4.84e-13,6;CL:0000075,3.85e-11,7;CL:0002076,2.04e-09,15;CL:0000066,7.74e-07,25;CL:0000223,7.85e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!6.61e-24!59;UBERON:0000160!1.32e-21!43;UBERON:0000344!1.31e-13!15;UBERON:0001242!2.58e-12!13;UBERON:0000060!2.58e-12!13;UBERON:0001262!2.58e-12!13;UBERON:0004786!2.58e-12!13;UBERON:0003350!2.18e-09!9;UBERON:0004808!2.18e-09!9;UBERON:0001277!2.18e-09!9;UBERON:0000485!2.82e-08!11;UBERON:0001007!3.91e-08!128;UBERON:0001555!3.91e-08!128;UBERON:0007026!3.91e-08!128;UBERON:0004119!9.25e-08!130;UBERON:0000925!9.25e-08!130;UBERON:0006595!9.25e-08!130;UBERON:0004923!1.22e-07!24;UBERON:0004921!2.40e-07!126;UBERON:0004185!2.40e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.53e-44,47;UBERON:0000160,4.60e-37,31;UBERON:0003350,2.65e-16,9;UBERON:0004808,2.65e-16,9;UBERON:0001277,2.65e-16,9;UBERON:0004921,2.06e-15,114;UBERON:0001007,4.64e-15,116;UBERON:0001555,4.64e-15,116;UBERON:0007026,4.64e-15,116;UBERON:0004119,1.02e-14,118;UBERON:0000925,1.02e-14,118;UBERON:0006595,1.02e-14,118;UBERON:0001242,2.41e-14,13;UBERON:0001262,2.41e-14,13;UBERON:0004786,2.41e-14,13;UBERON:0000485,3.56e-13,11;UBERON:0000344,2.87e-12,15;UBERON:0000945,1.32e-08,16;UBERON:0010039,1.32e-08,16;UBERON:0011216,8.98e-08,194;UBERON:0004923,3.29e-07,24;UBERON:0001155,3.46e-07,2;UBERON:0000059,3.46e-07,2|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,5.44435580352294,4.50806156951712,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.45881856213434,1.72269589234506,0.430761996159075,0.430942465371778,0.380046838912748,2.26827116783938,0.886922042621219,0,0,0,1.44425809875637,0.997407872150954,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0.988779870937496,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0.449371918214468,1.37250180845588,0.251308704225729,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0.252722758433675,0,0,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0.991256348951394,0.264450566663544,0,0.464473343720877,1.67527699718721,1.00841762311671,1.33426826306922,1.52180500890047,0.949058123089023,0.494096864172033,4.52403375840485,3.78017296878187,4.28920991662064,3.59527763461689,5.18731319699266,6.77080329064848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.763877555344259,0,0.162135226775035,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.874442509889552,0.18542530201051,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,1.08005340821801,1.04544148007234,2.62035076495413,0.809186078308924,1.32245529160537,4.18809507174447,3.75883422546199,0,0,0.448549638131936,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0.729320151204882,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0,0.280924522409647,0.192075457214608,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.436039249896986,0,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p@chr14:60796214..60796222,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=574 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:60796214..60796222,+ | |||
|id=chr14:60796214..60796222,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.18e-09!9;CL:0002251!2.18e-09!9;CL:0000239!8.21e-07!6;CL:0000677!8.21e-07!6;CL:0000212!8.21e-07!6;CL:0000584!8.21e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-16,9;CL:0002251,2.65e-16,9;CL:0000239,4.84e-13,6;CL:0000677,4.84e-13,6;CL:0000584,4.84e-13,6;CL:0000075,3.85e-11,7;CL:0002076,2.04e-09,15;CL:0000066,7.74e-07,25;CL:0000223,7.85e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.61e-24!59;UBERON:0000160!1.32e-21!43;UBERON:0000344!1.31e-13!15;UBERON:0001242!2.58e-12!13;UBERON:0000060!2.58e-12!13;UBERON:0001262!2.58e-12!13;UBERON:0004786!2.58e-12!13;UBERON:0003350!2.18e-09!9;UBERON:0004808!2.18e-09!9;UBERON:0001277!2.18e-09!9;UBERON:0000485!2.82e-08!11;UBERON:0001007!3.91e-08!128;UBERON:0001555!3.91e-08!128;UBERON:0007026!3.91e-08!128;UBERON:0004119!9.25e-08!130;UBERON:0000925!9.25e-08!130;UBERON:0006595!9.25e-08!130;UBERON:0004923!1.22e-07!24;UBERON:0004921!2.40e-07!126;UBERON:0004185!2.40e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.53e-44,47;UBERON:0000160,4.60e-37,31;UBERON:0003350,2.65e-16,9;UBERON:0004808,2.65e-16,9;UBERON:0001277,2.65e-16,9;UBERON:0004921,2.06e-15,114;UBERON:0001007,4.64e-15,116;UBERON:0001555,4.64e-15,116;UBERON:0007026,4.64e-15,116;UBERON:0004119,1.02e-14,118;UBERON:0000925,1.02e-14,118;UBERON:0006595,1.02e-14,118;UBERON:0001242,2.41e-14,13;UBERON:0001262,2.41e-14,13;UBERON:0004786,2.41e-14,13;UBERON:0000485,3.56e-13,11;UBERON:0000344,2.87e-12,15;UBERON:0000945,1.32e-08,16;UBERON:0010039,1.32e-08,16;UBERON:0011216,8.98e-08,194;UBERON:0004923,3.29e-07,24;UBERON:0001155,3.46e-07,2;UBERON:0000059,3.46e-07,2 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.81999695755814,5.44435580352294,4.50806156951712,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.45881856213434,1.72269589234506,0.430761996159075,0.430942465371778,0.380046838912748,2.26827116783938,0.886922042621219,0,0,0,1.44425809875637,0.997407872150954,3.06254034393554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0.117588707135705,0,0.988779870937496,0,0,0,0,0,1.86391761218122,0,0,2.04365644166873,0,0,0,0.449371918214468,1.37250180845588,0.251308704225729,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0.252722758433675,0,0,0,0.180062129805349,0,0.204109497453984,0.2562274405697,0.281105173679186,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.473489471170421,0,0.154267112887378,0.232533944750408,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0.991256348951394,0.264450566663544,0,0.464473343720877,1.67527699718721,1.00841762311671,1.33426826306922,1.52180500890047,0.949058123089023,0.494096864172033,4.52403375840485,3.78017296878187,4.28920991662064,3.59527763461689,5.18731319699266,6.77080329064848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.763877555344259,0,0.162135226775035,0.823684239564244,0,0.372140947668503,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.874442509889552,0.18542530201051,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0.203319467126849,1.08005340821801,1.04544148007234,2.62035076495413,0.809186078308924,1.32245529160537,4.18809507174447,3.75883422546199,0,0,0.448549638131936,0.330916980914195,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0,0,0.729320151204882,0,0.183843508450014,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0,0.280924522409647,0.192075457214608,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.436039249896986,0,0.169229215783353,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0,0,0.309873682371932,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p@chr14:60796214..60796222,+ | |||
}} |
Revision as of 02:39, 13 September 2013
Short description: | p@chr14:60796214..60796222, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:60796214..60796222, + |
Coexpression cluster: | MCL_coexpression_mm9:574 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.65e-16 | 9 |
epithelial cell of alimentary canal | 2.65e-16 | 9 |
brush border epithelial cell | 4.84e-13 | 6 |
gut absorptive cell | 4.84e-13 | 6 |
enterocyte | 4.84e-13 | 6 |
columnar/cuboidal epithelial cell | 3.85e-11 | 7 |
endo-epithelial cell | 2.04e-09 | 15 |
epithelial cell | 7.74e-07 | 25 |
endodermal cell | 7.85e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.53e-44 | 47 |
intestine | 4.60e-37 | 31 |
epithelium of mucosa | 2.65e-16 | 9 |
gastrointestinal system epithelium | 2.65e-16 | 9 |
intestinal epithelium | 2.65e-16 | 9 |
subdivision of digestive tract | 2.06e-15 | 114 |
digestive system | 4.64e-15 | 116 |
digestive tract | 4.64e-15 | 116 |
primitive gut | 4.64e-15 | 116 |
endoderm-derived structure | 1.02e-14 | 118 |
endoderm | 1.02e-14 | 118 |
presumptive endoderm | 1.02e-14 | 118 |
intestinal mucosa | 2.41e-14 | 13 |
wall of intestine | 2.41e-14 | 13 |
gastrointestinal system mucosa | 2.41e-14 | 13 |
simple columnar epithelium | 3.56e-13 | 11 |
mucosa | 2.87e-12 | 15 |
stomach | 1.32e-08 | 16 |
food storage organ | 1.32e-08 | 16 |
organ system subdivision | 8.98e-08 | 194 |
organ component layer | 3.29e-07 | 24 |
colon | 3.46e-07 | 2 |
large intestine | 3.46e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.