FFCP PHASE1:Mm9::chr14:55512970..55512990,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54196|HGNC=|MCL_coexpression_id=1007|UniProt=Q8CCS6|association_with_transcript=0bp_to_ENSMUST00000022808,ENSMUST00000116476,NM_019402,uc007txg.2,uc007txh.2,uc007txi.2_5end|description=CAGE_peak_1_at_Pabpn1_5end|id=chr14:55512970..55512990,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!1.66e-08!147;UBERON:0002323!6.61e-07!37;UBERON:0004458!6.61e-07!37|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.12e-07,134;UBERON:0002323,6.61e-07,37;UBERON:0004458,6.61e-07,37|phase1_expression=101.053922523125,135.751433571711,111.929812889826,110.399437126993,121.216766647016,128.763401556419,105.359300908582,51.3910827297474,53.21813697333,56.6436153699224,83.0407145893699,100.193831698143,53.5858284684674,43.9724624167557,69.2868304576578,76.5356510733542,61.5614452752769,51.5780640360719,55.8055744775357,43.7121341351971,96.5241343214642,64.4398273293746,57.7251533997047,63.5169918489824,70.6580585686884,89.5801864019432,80.1217312855879,85.5420793762979,51.1162998337646,62.2514420507029,69.4016498351104,52.7075458971494,49.8202477943502,31.6963362030877,72.7906081773212,50.8678014796987,74.5218150357647,59.4314915646409,35.9414258480948,50.7818031654584,53.5290654108223,52.5945023418003,65.0583873061746,28.8303713164072,32.7447487839032,52.3108243660792,48.5082633495784,40.1166287740022,34.4907306893121,29.3589147602168,38.3562795253493,27.3129872293446,97.8172593316603,95.0224406034861,83.3512621873311,37.3026182252123,32.6648121530183,39.1910790130856,77.2848880483664,62.9499265333719,67.8199601751612,49.1324571500242,48.0219189900015,62.5430303510572,38.565788140112,67.4956109198795,53.328819672276,67.238203431272,98.6088213053623,81.1385689373461,81.6060850043362,48.5606673486466,41.5232856989033,82.1913262732342,96.2288529023093,68.0221902091416,28.6301290598411,56.0547414193974,53.9158931729415,79.6593177890371,76.1177194772048,85.9507061418654,46.0651948352279,52.3369227329462,60.35530787184,36.8285731842085,44.4199644093201,62.4438143514757,66.9419549065347,45.0406498236442,16.5222758559956,41.3003460951065,21.759082678648,64.2246798049002,44.8345728038892,43.9066349355389,60.8124339170486,68.5129896763792,74.5585833210233,73.1412919236404,124.364739662809,82.1289455451634,300.670182853842,540.410694396532,45.0301365303325,37.4972600903146,39.9364311561679,74.6762573362652,34.1798006414267,70.9553424729862,80.3237062927209,69.7225945334803,50.7354093963329,77.9236051657059,91.2488367373069,69.4936250053105,61.7987419335935,43.9582045036531,91.1148868508371,93.8247729694973,90.7658640872217,98.4296763864501,74.5567044872489,89.0053622915103,114.986242040587,63.6088067469393,39.8984364604715,44.9927048245056,55.1484785497101,85.5304551001538,78.6901036848038,108.816668929741,79.0900656874858,104.843337505436,72.3102395067269,94.2621738423672,113.550890693103,99.7743904292946,63.686135125286,62.2907893423963,113.855387592366,91.2711354600887,83.3687660998767,109.110288113058,108.994471640427,107.999866200128,94.2639349070872,77.6110112217047,120.286940056526,119.70414874623,97.1250205384998,100.610841184257,97.8726317274105,81.8392591327091,71.6121834699643,106.483332747894,51.9637758611794,39.8889256027809,46.034486902086,80.9861770613812,84.8984337131568,81.2079897189177,80.7299548345567,77.7218715402245,89.4749254746794,74.4108623201305,71.8972715750979,95.046988686876,95.7738326496456,84.7104114648131,75.9614745444668,78.3631932599781,55.3266290533448,68.1768607302689,85.3777191170357,106.506273812559,83.5959520949009,78.2773677324091,116.455384792238,110.080182461848,93.4289094585177,82.2868780463237,74.0518886003418,74.7586710622357,83.517114831834,56.6564404250597,84.4486301568906,86.1481523938183,94.167654078535,76.3996497356088,80.8356306531356,79.2582267552381,118.921773897582,120.303683778044,112.70773567308,105.898690479563,99.6915784041596,127.78746384016,109.272736150717,80.152310352924,84.3083168508183,79.0975820738741,68.4805568571314,95.1017102581736,103.979708414884,96.2409841007174,102.444361301194,85.617891712108,91.6653066413111,76.5271725619156,91.44426790112,106.255266903788,110.701519026063,89.3138274404408,102.348356781576,101.031551178845,81.2670283254262,111.926896956301,68.7281867419769,107.631121885635,105.438339757991,96.0757185487565,103.029018998652,90.2858727611387,68.794612216058,110.055377391799,91.1131132933784,100.323504410895,104.123963933339,89.3055065200772,91.5230403889247,100.965042889895,58.8086007363162,39.7051149187658,81.141105048141,74.226984755973,62.6147300952389,80.8760637486202,79.5084485076876,65.642441073137,37.5454781105345,38.6534356853672,65.7041363085037,58.3083867004227,75.5287505139316,85.7721888290162,47.7676627976375,68.9723824670696,66.8036344729625,114.069067329742,85.1640511249612,104.702574956346,108.319827970128,79.0206889038445,76.9921802371784,81.8170743842287,103.999303595874,94.3025398779491,75.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| ||
|EntrezGene=54196 | |||
|HGNC= | |||
|MCL_coexpression_id=1007 | |||
|UniProt=Q8CCS6 | |||
|association_with_transcript=0bp_to_ENSMUST00000022808,ENSMUST00000116476,NM_019402,uc007txg.2,uc007txh.2,uc007txi.2_5end | |||
|description=CAGE_peak_1_at_Pabpn1_5end | |||
|id=chr14:55512970..55512990,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!1.66e-08!147;UBERON:0002323!6.61e-07!37;UBERON:0004458!6.61e-07!37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.12e-07,134;UBERON:0002323,6.61e-07,37;UBERON:0004458,6.61e-07,37 | |||
|phase1_expression=101.053922523125,135.751433571711,111.929812889826,110.399437126993,121.216766647016,128.763401556419,105.359300908582,51.3910827297474,53.21813697333,56.6436153699224,83.0407145893699,100.193831698143,53.5858284684674,43.9724624167557,69.2868304576578,76.5356510733542,61.5614452752769,51.5780640360719,55.8055744775357,43.7121341351971,96.5241343214642,64.4398273293746,57.7251533997047,63.5169918489824,70.6580585686884,89.5801864019432,80.1217312855879,85.5420793762979,51.1162998337646,62.2514420507029,69.4016498351104,52.7075458971494,49.8202477943502,31.6963362030877,72.7906081773212,50.8678014796987,74.5218150357647,59.4314915646409,35.9414258480948,50.7818031654584,53.5290654108223,52.5945023418003,65.0583873061746,28.8303713164072,32.7447487839032,52.3108243660792,48.5082633495784,40.1166287740022,34.4907306893121,29.3589147602168,38.3562795253493,27.3129872293446,97.8172593316603,95.0224406034861,83.3512621873311,37.3026182252123,32.6648121530183,39.1910790130856,77.2848880483664,62.9499265333719,67.8199601751612,49.1324571500242,48.0219189900015,62.5430303510572,38.565788140112,67.4956109198795,53.328819672276,67.238203431272,98.6088213053623,81.1385689373461,81.6060850043362,48.5606673486466,41.5232856989033,82.1913262732342,96.2288529023093,68.0221902091416,28.6301290598411,56.0547414193974,53.9158931729415,79.6593177890371,76.1177194772048,85.9507061418654,46.0651948352279,52.3369227329462,60.35530787184,36.8285731842085,44.4199644093201,62.4438143514757,66.9419549065347,45.0406498236442,16.5222758559956,41.3003460951065,21.759082678648,64.2246798049002,44.8345728038892,43.9066349355389,60.8124339170486,68.5129896763792,74.5585833210233,73.1412919236404,124.364739662809,82.1289455451634,300.670182853842,540.410694396532,45.0301365303325,37.4972600903146,39.9364311561679,74.6762573362652,34.1798006414267,70.9553424729862,80.3237062927209,69.7225945334803,50.7354093963329,77.9236051657059,91.2488367373069,69.4936250053105,61.7987419335935,43.9582045036531,91.1148868508371,93.8247729694973,90.7658640872217,98.4296763864501,74.5567044872489,89.0053622915103,114.986242040587,63.6088067469393,39.8984364604715,44.9927048245056,55.1484785497101,85.5304551001538,78.6901036848038,108.816668929741,79.0900656874858,104.843337505436,72.3102395067269,94.2621738423672,113.550890693103,99.7743904292946,63.686135125286,62.2907893423963,113.855387592366,91.2711354600887,83.3687660998767,109.110288113058,108.994471640427,107.999866200128,94.2639349070872,77.6110112217047,120.286940056526,119.70414874623,97.1250205384998,100.610841184257,97.8726317274105,81.8392591327091,71.6121834699643,106.483332747894,51.9637758611794,39.8889256027809,46.034486902086,80.9861770613812,84.8984337131568,81.2079897189177,80.7299548345567,77.7218715402245,89.4749254746794,74.4108623201305,71.8972715750979,95.046988686876,95.7738326496456,84.7104114648131,75.9614745444668,78.3631932599781,55.3266290533448,68.1768607302689,85.3777191170357,106.506273812559,83.5959520949009,78.2773677324091,116.455384792238,110.080182461848,93.4289094585177,82.2868780463237,74.0518886003418,74.7586710622357,83.517114831834,56.6564404250597,84.4486301568906,86.1481523938183,94.167654078535,76.3996497356088,80.8356306531356,79.2582267552381,118.921773897582,120.303683778044,112.70773567308,105.898690479563,99.6915784041596,127.78746384016,109.272736150717,80.152310352924,84.3083168508183,79.0975820738741,68.4805568571314,95.1017102581736,103.979708414884,96.2409841007174,102.444361301194,85.617891712108,91.6653066413111,76.5271725619156,91.44426790112,106.255266903788,110.701519026063,89.3138274404408,102.348356781576,101.031551178845,81.2670283254262,111.926896956301,68.7281867419769,107.631121885635,105.438339757991,96.0757185487565,103.029018998652,90.2858727611387,68.794612216058,110.055377391799,91.1131132933784,100.323504410895,104.123963933339,89.3055065200772,91.5230403889247,100.965042889895,58.8086007363162,39.7051149187658,81.141105048141,74.226984755973,62.6147300952389,80.8760637486202,79.5084485076876,65.642441073137,37.5454781105345,38.6534356853672,65.7041363085037,58.3083867004227,75.5287505139316,85.7721888290162,47.7676627976375,68.9723824670696,66.8036344729625,114.069067329742,85.1640511249612,104.702574956346,108.319827970128,79.0206889038445,76.9921802371784,81.8170743842287,103.999303595874,94.3025398779491,75.8925864703586,71.6323894709351,102.854460680952,104.334180360044,106.949213515416,98.9195052339104,80.1181425169991,110.35503127556,60.938689429928,126.943071292074,134.403672450282,81.8767473820683,91.3302203257709,63.8560367015413,74.869804373965,44.7563475198461,60.3106289723736,83.8855000620728,84.0213196589405,98.2722067531221,94.4566896171047,97.7069383836125,104.092683970735,105.870880335565,70.246881627794,68.4219364418781,77.2336381206294,82.1419734493626,89.263762192201,99.0818083844675,95.1391824938335,106.61062871424,56.0928818979723,55.0009207631976,56.3855893122049,72.5549669691486,126.850733426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| |||
|short_description=p1@Pabpn1 | |||
}} | |||
Revision as of 02:26, 13 September 2013
| Short description: | p1@Pabpn1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Pabpn1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1007 |
| Association with transcript: | 0bp_to_ENSMUST00000022808, ENSMUST00000116476, NM_019402, uc007txg.2, uc007txh.2, uc007txi.2_5end |
| EntrezGene: | Pabpn1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primordium | 1.12e-07 | 134 |
| body cavity | 6.61e-07 | 37 |
| body cavity or lining | 6.61e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
