FFCP PHASE1:Mm9::chr14:55305763..55305807,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=56215|HGNC=|UniProt=Q9JIX8,E9Q9R4,Q52KR6,Q80TU6|association_with_transcript=0bp_to_ENSMUST00000022793,ENSMUST00000111484,NM_001085473,NM_023190,uc007twv.2,uc007tww.2,uc007twx.2_5end|description=CAGE_peak_3_at_Acin1_5end|id=chr14:55305763..55305807,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!7.06e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.77e-07,18;UBERON:0000948,1.77e-07,18;UBERON:0005498,1.77e-07,18;UBERON:0004140,1.77e-07,18;UBERON:0009881,1.77e-07,18;UBERON:0004141,1.77e-07,18;UBERON:0003084,1.77e-07,18;UBERON:0007005,1.77e-07,18;UBERON:0004139,1.77e-07,18;UBERON:0004291,1.77e-07,18;UBERON:0004872,3.62e-07,33;UBERON:0001048,3.79e-07,134;UBERON:0000473,9.05e-07,14|phase1_expression=0.480446541314382,0,0,0,1.00179145989269,2.51818907867835,0.467225281191051,0,0,0,0,0,0.342401459862411,0,2.6648780945253,4.25198061518635,3.49780939064073,0.157731082679119,0,0.42438965179803,1.9559956734746,0.595745707205312,0.261199789138935,0.799962113967033,0.45881856213434,0.57423196411502,0,0.215471232685889,0.570070258369122,0.756090389279792,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.831173226792462,0.204169356262369,2.92972141515835,1.5626706890476,3.66466620781659,1.76469446409304,2.04913645487534,3.39857247121808,0,0.304130793658544,1.10128051297009,0,0,0,0.388859798148567,1.1198913730029,0,0,0.725362142011344,0,3.8588915405392,1.71920063963254,2.06268836910977,0.404632921719196,0,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.03689612308478,0.270011876663381,0.630974884054146,0.285650984403804,0.220868540951614,0.734944795289724,0.862609239164127,0,0,0,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.559198337475902,0.605809546665472,1.28471652181535,0.579728977403356,0,0.679971333707751,0,0.649776417447669,0,1.26399978118577,3.06774580640504,1.81850203222008,0.70667914902068,0.281686839553361,0,0,0,1.94841936910093,1.77351905832569,1.51657333504435,0.34255163915718,1.03575153458869,0.29688427812965,2.60227990149204,2.13125834818499,1.84492397804847,1.95939432718409,1.52865319276416,0.502666365318702,0.494389935468748,0.578397427679647,1.76922110389975,2.58826959915855,4.41683036920787,2.90925151881133,0,0.292780797011547,0,0.255457055208591,0.359445373517761,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0.41557608911912,0.162241263067758,0.712875546952214,2.86136032403214,0,1.26265113531884,1.17108398666433,0.459804208866946,0.720248519221397,1.20563854268572,1.08858398642125,1.2811372028485,0.843315521037559,1.03481348295606,2.58681591519411,1.32374256117473,0.879755620819744,0.657587197282725,0.556094498451196,0.696504333044333,1.02891068203972,1.79130840136644,1.40442637462647,0.257347907114715,0.284163499395593,2.89976081549703,3.04883877975425,1.80062061461015,3.07768156260773,1.96764231747404,3.08534225774756,3.25547522650571,2.14618721119695,1.98501082024188,3.94943639792353,1.80584210487005,1.62137619091711,0.438599962275997,1.53685080703735,1.61047702512446,0,0.411618449517138,1.98251269790279,2.3800550999719,1.06644125267617,2.32236671860439,1.41754207454303,1.81515172161008,0.889512175379481,0.951128130562796,1.42358718463353,0.494096864172033,1.00534083520108,0.795825888164603,1.16978452271472,0,1.72910439899755,2.19055400579804,1.32767530667157,1.5994791765362,2.25415471346161,1.22190796707189,1.35766741017338,0.841629838683823,0.885311519739602,0.295220295959204,0.470996183524124,0.493588655687202,0.296452627087149,4.33797274861845,3.93117990226406,4.94696647246678,5.68008339887808,3.37648023653384,5.0925170356284,5.17853047411459,1.29708181420028,2.19649130550465,5.75072826109418,1.48856379067401,0.312037673114561,0.252578877947112,0.538192240565737,0.964887042726734,1.66277871149944,1.13694847062291,2.28150967018836,3.39490171550376,2.34690248288502,2.01007508930179,1.6663054862021,1.17080188714679,1.7339865851681,1.32878813789265,1.11618338060241,1.14704320301017,1.38147985492716,0.867894351489069,0,1.08781136763742,0,0.275936746304732,0.642202359951168,0.820481806145422,1.80328439914343,1.26235463602186,1.57754109708128,1.17131623288992,0.646270193198397,2.38968797952552,1.78238939265915,1.13230612315533,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,1.41940085208269,0.35613120733451,0.977321756121456,0.659880491890142,0,0.485561272309963,0,0.377210159511796,2.36241514304618,0.922305443831782,0,1.09060118843252,1.42598951353889,0,0,0,0,1.26042765821917,0.517434735131018,0.643011105094777,1.24138163549592,1.24858172321449,0.822745103010605,0,1.40803024838226,0.63549621259146,0.220528398054962,1.31909002353184,0.968786560175433,1.93001359770099,2.86493625607528,1.64140899745061,0.874442509889552,0.556275906031529,3.75915937755276,1.23832120777933,2.96311243791539,6.02779062415011,5.87785179200408,4.11800711771741,0.509935289981566,0.559805809294632,0.829199842826543,0.954670618015114,1.89801596148681,1.42323626988794,1.29606408986162,0.836353184057875,0.218362563746178,1.07891477107857,1.07449492442937,0.785267825952089,0.648074866458964,0,7.89170114157866,2.8408143748356,2.97825282822776,1.94451188344048,3.22899558694328,3.04121025883401,2.11243029562357,8.72369378454466,11.5345278868282,7.73069186643219,6.91272015018877,0,1.21635129174099,1.02710957164827,0.909445760844565,0.358053391334963,0.39736270956253,0.600977247599844,0.295379054349154,0.302899349844443,0.381034033274999,0.504130925684203,0.682205165178267,0.288635524920988,0,1.13365191807606,1.55390167361845,4.84454825691169,2.3503846290971,1.15913756419314,1.12609485270709,0.915758121336325,1.71494703263253,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,3.1136204275253,0.798049746802062,0.512200817262403,1.45864030240976,3.14419743941973,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,2.02157769411038,1.01391719956096,1.50901073108861,1.31098110457835,1.98477972455095,1.37845125493472,1.42888107384922,1.39061191133827,1.92909220463705,2.47251540481984,0.735994600671987,0.685738504770831,0.70990322463735,1.43061713968393,1.74415699958794,0.752875043322645,1.18460451048347,0.73171189149109,1.31534855718921,1.35804113845862,1.12228454331548,1.54225523561426,1.67457620038458,1.63692417267876,2.32405261778949,1.54325288784913,1.24905288968973,1.40358965067245,1.50409737833809,1.14772999241306,0.441182838239031,1.15933917810211|short_description=p3@Acin1}} | ||
|EntrezGene=56215 | |||
|HGNC= | |||
|UniProt=Q9JIX8,E9Q9R4,Q52KR6,Q80TU6 | |||
|association_with_transcript=0bp_to_ENSMUST00000022793,ENSMUST00000111484,NM_001085473,NM_023190,uc007twv.2,uc007tww.2,uc007twx.2_5end | |||
|description=CAGE_peak_3_at_Acin1_5end | |||
|id=chr14:55305763..55305807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.06e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.77e-07,18;UBERON:0000948,1.77e-07,18;UBERON:0005498,1.77e-07,18;UBERON:0004140,1.77e-07,18;UBERON:0009881,1.77e-07,18;UBERON:0004141,1.77e-07,18;UBERON:0003084,1.77e-07,18;UBERON:0007005,1.77e-07,18;UBERON:0004139,1.77e-07,18;UBERON:0004291,1.77e-07,18;UBERON:0004872,3.62e-07,33;UBERON:0001048,3.79e-07,134;UBERON:0000473,9.05e-07,14 | |||
|phase1_expression=0.480446541314382,0,0,0,1.00179145989269,2.51818907867835,0.467225281191051,0,0,0,0,0,0.342401459862411,0,2.6648780945253,4.25198061518635,3.49780939064073,0.157731082679119,0,0.42438965179803,1.9559956734746,0.595745707205312,0.261199789138935,0.799962113967033,0.45881856213434,0.57423196411502,0,0.215471232685889,0.570070258369122,0.756090389279792,0.443461021310609,0.635030673459631,0.61506478758457,0,0,0.831173226792462,0.204169356262369,2.92972141515835,1.5626706890476,3.66466620781659,1.76469446409304,2.04913645487534,3.39857247121808,0,0.304130793658544,1.10128051297009,0,0,0,0.388859798148567,1.1198913730029,0,0,0.725362142011344,0,3.8588915405392,1.71920063963254,2.06268836910977,0.404632921719196,0,0.633831403506179,0,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.03689612308478,0.270011876663381,0.630974884054146,0.285650984403804,0.220868540951614,0.734944795289724,0.862609239164127,0,0,0,0.46081959976873,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,0.30559649555362,0,0.142371680799103,0.559198337475902,0.605809546665472,1.28471652181535,0.579728977403356,0,0.679971333707751,0,0.649776417447669,0,1.26399978118577,3.06774580640504,1.81850203222008,0.70667914902068,0.281686839553361,0,0,0,1.94841936910093,1.77351905832569,1.51657333504435,0.34255163915718,1.03575153458869,0.29688427812965,2.60227990149204,2.13125834818499,1.84492397804847,1.95939432718409,1.52865319276416,0.502666365318702,0.494389935468748,0.578397427679647,1.76922110389975,2.58826959915855,4.41683036920787,2.90925151881133,0,0.292780797011547,0,0.255457055208591,0.359445373517761,0,0.381210681219194,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0.41557608911912,0.162241263067758,0.712875546952214,2.86136032403214,0,1.26265113531884,1.17108398666433,0.459804208866946,0.720248519221397,1.20563854268572,1.08858398642125,1.2811372028485,0.843315521037559,1.03481348295606,2.58681591519411,1.32374256117473,0.879755620819744,0.657587197282725,0.556094498451196,0.696504333044333,1.02891068203972,1.79130840136644,1.40442637462647,0.257347907114715,0.284163499395593,2.89976081549703,3.04883877975425,1.80062061461015,3.07768156260773,1.96764231747404,3.08534225774756,3.25547522650571,2.14618721119695,1.98501082024188,3.94943639792353,1.80584210487005,1.62137619091711,0.438599962275997,1.53685080703735,1.61047702512446,0,0.411618449517138,1.98251269790279,2.3800550999719,1.06644125267617,2.32236671860439,1.41754207454303,1.81515172161008,0.889512175379481,0.951128130562796,1.42358718463353,0.494096864172033,1.00534083520108,0.795825888164603,1.16978452271472,0,1.72910439899755,2.19055400579804,1.32767530667157,1.5994791765362,2.25415471346161,1.22190796707189,1.35766741017338,0.841629838683823,0.885311519739602,0.295220295959204,0.470996183524124,0.493588655687202,0.296452627087149,4.33797274861845,3.93117990226406,4.94696647246678,5.68008339887808,3.37648023653384,5.0925170356284,5.17853047411459,1.29708181420028,2.19649130550465,5.75072826109418,1.48856379067401,0.312037673114561,0.252578877947112,0.538192240565737,0.964887042726734,1.66277871149944,1.13694847062291,2.28150967018836,3.39490171550376,2.34690248288502,2.01007508930179,1.6663054862021,1.17080188714679,1.7339865851681,1.32878813789265,1.11618338060241,1.14704320301017,1.38147985492716,0.867894351489069,0,1.08781136763742,0,0.275936746304732,0.642202359951168,0.820481806145422,1.80328439914343,1.26235463602186,1.57754109708128,1.17131623288992,0.646270193198397,2.38968797952552,1.78238939265915,1.13230612315533,0.809621403349789,1.16902343164525,0.395287777946524,0.321321316421807,1.41940085208269,0.35613120733451,0.977321756121456,0.659880491890142,0,0.485561272309963,0,0.377210159511796,2.36241514304618,0.922305443831782,0,1.09060118843252,1.42598951353889,0,0,0,0,1.26042765821917,0.517434735131018,0.643011105094777,1.24138163549592,1.24858172321449,0.822745103010605,0,1.40803024838226,0.63549621259146,0.220528398054962,1.31909002353184,0.968786560175433,1.93001359770099,2.86493625607528,1.64140899745061,0.874442509889552,0.556275906031529,3.75915937755276,1.23832120777933,2.96311243791539,6.02779062415011,5.87785179200408,4.11800711771741,0.509935289981566,0.559805809294632,0.829199842826543,0.954670618015114,1.89801596148681,1.42323626988794,1.29606408986162,0.836353184057875,0.218362563746178,1.07891477107857,1.07449492442937,0.785267825952089,0.648074866458964,0,7.89170114157866,2.8408143748356,2.97825282822776,1.94451188344048,3.22899558694328,3.04121025883401,2.11243029562357,8.72369378454466,11.5345278868282,7.73069186643219,6.91272015018877,0,1.21635129174099,1.02710957164827,0.909445760844565,0.358053391334963,0.39736270956253,0.600977247599844,0.295379054349154,0.302899349844443,0.381034033274999,0.504130925684203,0.682205165178267,0.288635524920988,0,1.13365191807606,1.55390167361845,4.84454825691169,2.3503846290971,1.15913756419314,1.12609485270709,0.915758121336325,1.71494703263253,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,3.1136204275253,0.798049746802062,0.512200817262403,1.45864030240976,3.14419743941973,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,2.02157769411038,1.01391719956096,1.50901073108861,1.31098110457835,1.98477972455095,1.37845125493472,1.42888107384922,1.39061191133827,1.92909220463705,2.47251540481984,0.735994600671987,0.685738504770831,0.70990322463735,1.43061713968393,1.74415699958794,0.752875043322645,1.18460451048347,0.73171189149109,1.31534855718921,1.35804113845862,1.12228454331548,1.54225523561426,1.67457620038458,1.63692417267876,2.32405261778949,1.54325288784913,1.24905288968973,1.40358965067245,1.50409737833809,1.14772999241306,0.441182838239031,1.15933917810211 | |||
|short_description=p3@Acin1 | |||
}} | |||
Revision as of 02:26, 13 September 2013
| Short description: | p3@Acin1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Acin1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000022793, ENSMUST00000111484, NM_001085473, NM_023190, uc007twv.2, uc007tww.2, uc007twx.2_5end |
| EntrezGene: | Acin1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| primary circulatory organ | 1.77e-07 | 18 |
| heart | 1.77e-07 | 18 |
| primitive heart tube | 1.77e-07 | 18 |
| primary heart field | 1.77e-07 | 18 |
| anterior lateral plate mesoderm | 1.77e-07 | 18 |
| heart tube | 1.77e-07 | 18 |
| heart primordium | 1.77e-07 | 18 |
| cardiac mesoderm | 1.77e-07 | 18 |
| cardiogenic plate | 1.77e-07 | 18 |
| heart rudiment | 1.77e-07 | 18 |
| splanchnic layer of lateral plate mesoderm | 3.62e-07 | 33 |
| primordium | 3.79e-07 | 134 |
| testis | 9.05e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
