FFCP PHASE1:Hg19::chr4:120133777..120133790,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54532|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29255|TSSclassifier=S|UniProt=Q70EK8,Q9H9I0|association_with_transcript=0bp_to_ENST00000274030,NM_019050,uc003icr.3,uc003ics.3_5end|coexpression_cluster_id=C4365|description=CAGE_peak_4_at_USP53_5end|id=chr4:120133777..120133790,+|ontology_enrichment_celltype=CL:0000057!8.02e-10!75|ontology_enrichment_celltype_v019=CL:0000136;2.49e-08;13!CL:0002334;9.19e-07;12|ontology_enrichment_celltype_v019_2=CL:0000057,1.60e-10,76;CL:0000136,1.22e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!1.82e-11!659;UBERON:0000467!8.33e-09!625;UBERON:0000480!1.05e-08!626;UBERON:0000926!1.65e-07!448;UBERON:0004120!1.65e-07!448;UBERON:0006603!1.65e-07!448;UBERON:0000062!6.38e-07!511;UBERON:0003102!7.61e-07!95;UBERON:0007023!8.63e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.53e-08,315;UBERON:0004120,6.53e-08,315;UBERON:0006603,6.53e-08,315|phase1_expression=12.1724514111273,6.85121676451146,31.5737865174975,13.009528785907,6.25745532198203,17.4467704820074,0,10.1075179748293,1.30592814099919,1.47440361900905,0.697801167972428,0,0,0,0.662794751455832,2.01697543935533,2.41077811209591,2.19093027116212,1.46379839637152,0,0.204000691244253,0,0.286235987131057,0.547497700291537,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,1.39440961044543,0.284338464974843,0.293600439334847,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0.257575567634187,0.436194716338694,0,0,0.464858073811369,0.822335776043652,2.16794459626573,2.58923153089935,1.0246428261164,1.6553756092201,4.82643953031266,4.51839278508678,0,0.752969358170419,0.272906150057846,0.674170453335254,2.14258724659632,1.92557416245656,1.27867425159808,0.659702600373432,0.997318288108159,0.426224750532694,2.61188314765726,3.97169657283798,3.73693349397345,2.51248665256743,3.12889751052121,1.73751075764093,0.605399502633369,3.31449872388808,1.26584954976354,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0,0,0,0,0.593146252648242,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0.637130828648193,0,0.950452044448374,0,0.383959833463255,1.24930726552346,0.236777252044017,0,0,0,0,0,0,0.767175371061182,0,0.50133791063589,0,0,0,0.472674085820339,0.221729397462564,0.614843499851882,0.72038491523742,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.715471872916026,0,0,0.596287222100115,2.58070378531837,0.694281003215189,1.69592382577203,0.838998872419812,1.37559020970034,0.626984899610432,0.775250277507987,1.42306505074684,0,0,0,0.24406205754817,0.735326160691737,0,0.535798369704479,1.34717623575702,1.80178368773316,1.53316637465883,0,0.916008719652036,0,0,0,9.93943903390637,2.27934920996244,51.5071713363421,6.88407889797153,0.709336764396714,3.92474320099615,0,0.49333509683432,4.04574346019696,2.82892411346345,1.47115712802113,0,0,0.937285727335186,1.87296046098192,1.71141546463335,4.93180645820944,1.76151747965647,0.323745888736263,0.702254033511242,2.65400422631361,0.245668634623536,0.619954687054593,2.37600571456411,1.48360157567134,4.55080680969013,4.31170885089743,1.34668891163253,1.12606667884768,4.98715407871529,0.877955241761676,0.612975591598039,2.10333282469236,1.02088964844019,1.79389635688862,1.92201649936711,3.81477422087211,0.900273288253207,2.16410311400722,2.83404594050192,1.30281799432113,1.18143432568886,0.487185025805993,3.02920529092937,3.95814564161887,4.0411514204703,2.84007674013291,3.52632343796741,1.01736355386293,1.15956511897978,1.36373060295417,0.860413786167011,0.487894824518382,0.397589304964456,0.464775771478074,0.518305275076852,0.504641701751257,0.36497735907583,0,0.643240938192885,0,13.0023019848954,5.0531563716871,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,2.94017422771084,0,0,0.590789906681404,0.882926198829301,0.122988438543114,0.171567810298526,0.548751427043128,0,0.402115889646523,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0.190254152234598,0,0,0,0.702012795417713,0.445893486866185,0,0.335964256397719,1.13420077793909,3.04498977189684,1.16253575405585,0.383382679165211,5.91195885475132,0.44024217006613,2.48793738648926,3.02651902175619,1.8936365013957,0.063497894292169,0,0,0,0.822619941626588,1.8020583470635,0.571652865261156,0.448524337381443,0.87192013766656,0.51336800074665,1.16344544182,17.8828222925941,4.22651376278,4.25500986535793,6.24044621468197,0,0,0.266422179016099,2.00169191121407,0.542621605391443,0,0.977208552881205,1.42156779497018,0,17.483483869456,17.4306691720059,7.79789331220045,0,0,0,1.67737398844108,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29255 | |||
|TSSclassifier=S | |||
|UniProt=Q70EK8,Q9H9I0 | |||
|association_with_transcript=0bp_to_ENST00000274030,NM_019050,uc003icr.3,uc003ics.3_5end | |||
|coexpression_cluster_id=C4365 | |||
|description=CAGE_peak_4_at_USP53_5end | |||
|id=chr4:120133777..120133790,+ | |||
|ontology_enrichment_celltype=CL:0000057!8.02e-10!75 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.49e-08;13!CL:0002334;9.19e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.60e-10,76;CL:0000136,1.22e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.82e-11!659;UBERON:0000467!8.33e-09!625;UBERON:0000480!1.05e-08!626;UBERON:0000926!1.65e-07!448;UBERON:0004120!1.65e-07!448;UBERON:0006603!1.65e-07!448;UBERON:0000062!6.38e-07!511;UBERON:0003102!7.61e-07!95;UBERON:0007023!8.63e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,6.53e-08,315;UBERON:0004120,6.53e-08,315;UBERON:0006603,6.53e-08,315 | |||
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| |||
|short_description=p4@USP53 | |||
}} |
Revision as of 02:14, 13 September 2013
Short description: | p4@USP53 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_USP53_5end |
Coexpression cluster: | C4365_Fibroblast_basal_mesenchymal_Adipocyte_melanoma_Mesothelial_hepatic |
Association with transcript: | 0bp_to_ENST00000274030, NM_019050, uc003icr.3, uc003ics.3_5end |
EntrezGene: | USP53 |
HGNC: | 29255 |
UniProt: | Q70EK8Q9H9I0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.60e-10 | 76 |
fat cell | 1.22e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.53e-08 | 315 |
mesoderm-derived structure | 6.53e-08 | 315 |
presumptive mesoderm | 6.53e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.