FFCP PHASE1:Mm9::chr14:26427241..26427280,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=328365|HGNC=|MCL_coexpression_id=1|UniProt=E0CX95|association_with_transcript=-43bp_to_ENSMUST00000160229_5end|description=CAGE_peak_7_at_Zmiz1_5end|id=chr14:26427241..26427280,+|ontology_enrichment_celltype=CL:0000540!1.84e-11!33;CL:0000047!1.84e-11!33;CL:0000031!1.84e-11!33;CL:0000404!1.84e-11!33;CL:0000117!3.30e-11!23;CL:0000337!3.30e-11!23;CL:0002319!2.53e-07!43;CL:0000393!7.13e-07!39;CL:0000211!7.13e-07!39;CL:0000221!7.84e-07!44;CL:0000133!7.84e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,8.43e-12,23;CL:0000337,8.43e-12,23;CL:0000540,1.48e-11,33;CL:0000047,1.48e-11,33;CL:0000031,1.48e-11,33;CL:0000404,1.48e-11,33;CL:0000393,1.48e-07,39;CL:0000211,1.48e-07,39;CL:0002319,1.95e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.30e-18!73;UBERON:0005743!2.30e-18!73;UBERON:0000073!1.05e-17!75;UBERON:0001016!1.05e-17!75;UBERON:0002020!8.57e-16!34;UBERON:0001049!8.19e-15!52;UBERON:0005068!8.19e-15!52;UBERON:0006241!8.19e-15!52;UBERON:0007135!8.19e-15!52;UBERON:0000955!4.56e-14!50;UBERON:0006238!4.56e-14!50;UBERON:0002616!1.58e-13!49;UBERON:0003056!1.64e-13!49;UBERON:0004121!3.35e-13!102;UBERON:0000924!3.35e-13!102;UBERON:0006601!3.35e-13!102;UBERON:0003080!3.44e-13!40;UBERON:0002791!6.42e-13!29;UBERON:0003528!6.42e-13!29;UBERON:0001893!6.42e-13!29;UBERON:0002346!7.79e-13!71;UBERON:0003075!7.79e-13!71;UBERON:0007284!7.79e-13!71;UBERON:0002780!1.02e-12!39;UBERON:0001890!1.02e-12!39;UBERON:0006240!1.02e-12!39;UBERON:0007811!5.97e-12!86;UBERON:0000153!6.50e-12!94;UBERON:0000033!9.37e-12!63;UBERON:0000956!3.35e-10!21;UBERON:0001869!3.35e-10!21;UBERON:0000203!3.35e-10!21;UBERON:0002619!2.59e-08!17;UBERON:0002021!4.91e-08!10;UBERON:0000411!4.91e-08!10;UBERON:0001950!4.91e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.73e-19,73;UBERON:0001016,6.58e-18,75;UBERON:0002020,5.00e-17,34;UBERON:0000073,1.47e-16,54;UBERON:0001049,5.59e-15,52;UBERON:0005068,5.59e-15,52;UBERON:0006241,5.59e-15,52;UBERON:0007135,5.59e-15,52;UBERON:0004121,7.50e-15,95;UBERON:0000924,7.50e-15,95;UBERON:0006601,7.50e-15,95;UBERON:0002346,3.87e-14,64;UBERON:0003075,3.87e-14,64;UBERON:0007284,3.87e-14,64;UBERON:0003528,6.45e-14,29;UBERON:0002791,6.45e-14,29;UBERON:0001893,6.45e-14,29;UBERON:0003080,8.08e-14,40;UBERON:0003056,1.14e-13,49;UBERON:0002780,2.61e-13,39;UBERON:0001890,2.61e-13,39;UBERON:0006240,2.61e-13,39;UBERON:0000955,1.03e-12,47;UBERON:0006238,1.03e-12,47;UBERON:0002616,3.68e-12,46;UBERON:0010371,1.03e-11,73;UBERON:0000956,3.62e-11,21;UBERON:0001869,3.62e-11,21;UBERON:0000203,3.62e-11,21;UBERON:0002619,4.00e-09,17;UBERON:0002021,1.47e-08,10;UBERON:0000411,1.47e-08,10;UBERON:0001950,1.47e-08,10;UBERON:0010314,3.47e-08,92|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,1.16806320297763,0.645616617207881,2.111830832275,3.7450324211519,0.513653904676515,2.23362045186942,1.71200729931206,1.74840804837995,0,0.404950534779652,0.699561878128147,1.89277299214943,1.37114433605739,2.54633791078818,0.765389611359628,0.496454756004426,0,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0,0.504060259519861,0,0.635030673459631,0,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,2.94115744015507,2.73218193983378,0.485510353031154,0,0.101376931219515,0,0.782391344348039,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0.503347818173209,1.45072428402269,2.68875039313971,0.257259436035947,0.286533439938757,0,4.45096213891115,4.23192783417626,5.70448263155561,0,0,2.6996991518442,4.94433181283487,2.8419204597844,2.09720077362883,3.07374644257244,4.14758449233911,4.86021377994086,2.3135745748652,5.42736870367227,4.63823935998388,5.51208596467293,6.22995561618536,3.67687514644008,3.30347642998166,3.95830748064082,3.68655679814984,4.3522474950964,5.76372154695181,3.12548022334056,2.23346399201105,0.56276261003168,3.66715794664344,5.59794312399969,4.6982654663704,5.96478226640962,1.06016670666458,0.755715601067855,1.15945795480671,0.860423876981386,0,0.539703191637817,0,0,0.983110940922263,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,5.69663344023778,0.445326417194474,1.38788261412909,0.608930956624282,0.691846491768175,1.50722640552623,1.17588707135705,0.502666365318702,0.247194967734374,0.578397427679647,0.884610551949874,0.808834249737046,0.441683036920787,0.484875253135222,0,1.17112318804619,0.83778682725382,0.255457055208591,1.07833612055328,0,0.889491589511453,3.74476598512057,10.980014467647,11.8115090986093,9.73416193076748,12.5300574091862,4.1557608911912,5.51620294430376,0.305518091550949,0.497627882440372,0,0.841767423545896,0.650602214813519,1.14951052216736,1.62055916824814,1.80845781402858,2.17716797284249,2.17793324484245,3.09215691047105,3.88055056108524,1.29340795759705,1.51284864134255,1.75951124163949,1.31517439456545,0.556094498451196,1.0447564995665,1.02891068203972,1.99034266818493,0,0.257347907114715,0,0.828503090142008,0.703578179943289,1.44049649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| ||
|EntrezGene=328365 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E0CX95 | |||
|association_with_transcript=-43bp_to_ENSMUST00000160229_5end | |||
|description=CAGE_peak_7_at_Zmiz1_5end | |||
|id=chr14:26427241..26427280,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.84e-11!33;CL:0000047!1.84e-11!33;CL:0000031!1.84e-11!33;CL:0000404!1.84e-11!33;CL:0000117!3.30e-11!23;CL:0000337!3.30e-11!23;CL:0002319!2.53e-07!43;CL:0000393!7.13e-07!39;CL:0000211!7.13e-07!39;CL:0000221!7.84e-07!44;CL:0000133!7.84e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.43e-12,23;CL:0000337,8.43e-12,23;CL:0000540,1.48e-11,33;CL:0000047,1.48e-11,33;CL:0000031,1.48e-11,33;CL:0000404,1.48e-11,33;CL:0000393,1.48e-07,39;CL:0000211,1.48e-07,39;CL:0002319,1.95e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.30e-18!73;UBERON:0005743!2.30e-18!73;UBERON:0000073!1.05e-17!75;UBERON:0001016!1.05e-17!75;UBERON:0002020!8.57e-16!34;UBERON:0001049!8.19e-15!52;UBERON:0005068!8.19e-15!52;UBERON:0006241!8.19e-15!52;UBERON:0007135!8.19e-15!52;UBERON:0000955!4.56e-14!50;UBERON:0006238!4.56e-14!50;UBERON:0002616!1.58e-13!49;UBERON:0003056!1.64e-13!49;UBERON:0004121!3.35e-13!102;UBERON:0000924!3.35e-13!102;UBERON:0006601!3.35e-13!102;UBERON:0003080!3.44e-13!40;UBERON:0002791!6.42e-13!29;UBERON:0003528!6.42e-13!29;UBERON:0001893!6.42e-13!29;UBERON:0002346!7.79e-13!71;UBERON:0003075!7.79e-13!71;UBERON:0007284!7.79e-13!71;UBERON:0002780!1.02e-12!39;UBERON:0001890!1.02e-12!39;UBERON:0006240!1.02e-12!39;UBERON:0007811!5.97e-12!86;UBERON:0000153!6.50e-12!94;UBERON:0000033!9.37e-12!63;UBERON:0000956!3.35e-10!21;UBERON:0001869!3.35e-10!21;UBERON:0000203!3.35e-10!21;UBERON:0002619!2.59e-08!17;UBERON:0002021!4.91e-08!10;UBERON:0000411!4.91e-08!10;UBERON:0001950!4.91e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.73e-19,73;UBERON:0001016,6.58e-18,75;UBERON:0002020,5.00e-17,34;UBERON:0000073,1.47e-16,54;UBERON:0001049,5.59e-15,52;UBERON:0005068,5.59e-15,52;UBERON:0006241,5.59e-15,52;UBERON:0007135,5.59e-15,52;UBERON:0004121,7.50e-15,95;UBERON:0000924,7.50e-15,95;UBERON:0006601,7.50e-15,95;UBERON:0002346,3.87e-14,64;UBERON:0003075,3.87e-14,64;UBERON:0007284,3.87e-14,64;UBERON:0003528,6.45e-14,29;UBERON:0002791,6.45e-14,29;UBERON:0001893,6.45e-14,29;UBERON:0003080,8.08e-14,40;UBERON:0003056,1.14e-13,49;UBERON:0002780,2.61e-13,39;UBERON:0001890,2.61e-13,39;UBERON:0006240,2.61e-13,39;UBERON:0000955,1.03e-12,47;UBERON:0006238,1.03e-12,47;UBERON:0002616,3.68e-12,46;UBERON:0010371,1.03e-11,73;UBERON:0000956,3.62e-11,21;UBERON:0001869,3.62e-11,21;UBERON:0000203,3.62e-11,21;UBERON:0002619,4.00e-09,17;UBERON:0002021,1.47e-08,10;UBERON:0000411,1.47e-08,10;UBERON:0001950,1.47e-08,10;UBERON:0010314,3.47e-08,92 | |||
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| |||
|short_description=p7@Zmiz1 | |||
}} |
Revision as of 01:50, 13 September 2013
Short description: | p7@Zmiz1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Zmiz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -43bp_to_ENSMUST00000160229_5end |
EntrezGene: | Zmiz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.43e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.43e-12 | 23 |
neuron | 1.48e-11 | 33 |
neuronal stem cell | 1.48e-11 | 33 |
neuroblast | 1.48e-11 | 33 |
electrically signaling cell | 1.48e-11 | 33 |
electrically responsive cell | 1.48e-07 | 39 |
electrically active cell | 1.48e-07 | 39 |
neural cell | 1.95e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.73e-19 | 73 |
nervous system | 6.58e-18 | 75 |
gray matter | 5.00e-17 | 34 |
regional part of nervous system | 1.47e-16 | 54 |
neural tube | 5.59e-15 | 52 |
neural rod | 5.59e-15 | 52 |
future spinal cord | 5.59e-15 | 52 |
neural keel | 5.59e-15 | 52 |
ectoderm-derived structure | 7.50e-15 | 95 |
ectoderm | 7.50e-15 | 95 |
presumptive ectoderm | 7.50e-15 | 95 |
neurectoderm | 3.87e-14 | 64 |
neural plate | 3.87e-14 | 64 |
presumptive neural plate | 3.87e-14 | 64 |
brain grey matter | 6.45e-14 | 29 |
regional part of telencephalon | 6.45e-14 | 29 |
telencephalon | 6.45e-14 | 29 |
anterior neural tube | 8.08e-14 | 40 |
pre-chordal neural plate | 1.14e-13 | 49 |
regional part of forebrain | 2.61e-13 | 39 |
forebrain | 2.61e-13 | 39 |
future forebrain | 2.61e-13 | 39 |
brain | 1.03e-12 | 47 |
future brain | 1.03e-12 | 47 |
regional part of brain | 3.68e-12 | 46 |
ecto-epithelium | 1.03e-11 | 73 |
cerebral cortex | 3.62e-11 | 21 |
cerebral hemisphere | 3.62e-11 | 21 |
pallium | 3.62e-11 | 21 |
regional part of cerebral cortex | 4.00e-09 | 17 |
occipital lobe | 1.47e-08 | 10 |
visual cortex | 1.47e-08 | 10 |
neocortex | 1.47e-08 | 10 |
structure with developmental contribution from neural crest | 3.47e-08 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.