FFCP PHASE1:Hg19::chr3:71542827..71542838,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27086|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3823|TSSclassifier=S|UniProt=G5E965|association_with_transcript=-121bp_to_ENST00000327590,uc003don.2_5end|coexpression_cluster_id=C23|description=CAGE_peak_53_at_FOXP1_5end|id=chr3:71542827..71542838,-|ontology_enrichment_celltype=CL:0000791!8.59e-40!18;CL:0000789!8.59e-40!18;CL:0002420!8.59e-40!18;CL:0002419!8.59e-40!18;CL:0000790!8.59e-40!18;CL:0000625!1.96e-27!11;CL:0000084!3.13e-27!25;CL:0000827!3.13e-27!25;CL:0000624!1.37e-16!6;CL:0000838!2.97e-15!52;CL:0000542!7.34e-15!53;CL:0000051!7.34e-15!53;CL:0000738!1.28e-12!140;CL:0002087!3.35e-11!119;CL:0000898!3.26e-09!3;CL:0000037!1.17e-08!172;CL:0000566!1.17e-08!172;CL:0002031!1.40e-08!124;CL:0000842!1.50e-08!3;CL:0000623!2.89e-08!3;CL:0000825!2.89e-08!3;CL:0000988!9.90e-08!182;CL:0000815!7.94e-07!2;CL:0000792!7.94e-07!2;CL:0002677!7.94e-07!2|ontology_enrichment_celltype_v019=CL:0000791;3.39e-57;18!CL:0000789;3.39e-57;18!CL:0002419;3.39e-57;18!CL:0000084;3.25e-40;25!CL:0000625;1.02e-33;11!CL:0000624;2.85e-29;6!CL:0000898;9.41e-16;3!CL:0000226;2.04e-14;3!CL:0000842;2.04e-14;3!CL:0000623;5.39e-14;3!CL:0000542;2.06e-12;53!CL:0000815;2.77e-11;2!CL:0000792;2.77e-11;2!CL:0002677;2.77e-11;2|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-57,18;CL:0000789,3.15e-57,18;CL:0002420,3.15e-57,18;CL:0002419,3.15e-57,18;CL:0000790,3.15e-57,18;CL:0000084,3.08e-40,25;CL:0000827,3.08e-40,25;CL:0000625,9.63e-34,11;CL:0000624,2.79e-29,6;CL:0000838,1.59e-25,52;CL:0000542,5.79e-25,53;CL:0000051,5.79e-25,53;CL:0000898,1.17e-15,3;CL:0002087,1.41e-14,115;CL:0000226,1.95e-14,3;CL:0000842,1.95e-14,3;CL:0000623,6.49e-14,3;CL:0000825,6.49e-14,3;CL:0000738,7.16e-13,136;CL:0000815,2.84e-11,2;CL:0000792,2.84e-11,2;CL:0002677,2.84e-11,2;CL:0002031,8.93e-10,120;CL:0000037,1.82e-09,168;CL:0000988,9.84e-09,177;CL:0002032,3.95e-07,161;CL:0000837,3.95e-07,161|ontology_enrichment_development_v019=CL:0000790;3.39e-57;18!CL:0000051;2.06e-12;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!2.07e-15!15;UBERON:0000179!2.07e-15!15;UBERON:0000463!2.07e-15!15;UBERON:0004177!4.59e-08!7|ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-18;15!UBERON:0000179;1.25e-18;15!UBERON:0000463;1.25e-18;15!UBERON:0002390;6.63e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.48e-18,15;UBERON:0000179,1.48e-18,15;UBERON:0000463,1.48e-18,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,0,0.971680998056939,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,4.32761494250433,3.93010762749165,3.70082698199117,1.17030546773475,9.12582346574053,9.9424039204294,1.94826728407911,0.668462741311041,7.36514768687093,4.43067789167242,8.12411591295047,0.25618263945135,0,1.15106533222573,1.10540007114339,1.73881851441031,5.6348894001583,5.61835738988397,5.22677619024884,0.339928028092699,3.06576394881537,3.77990190030893,3.54227568827304,3.82278497188916,3.90650072313851,0.950452044448374,3.312652619711,5.63141089079441,1.24930726552346,2.60454977248419,0.821127996921047,4.83856183739358,2.13952156626806,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,0.764637207142375,1.13929437434833,2.62054953003568,2.05681136543097,0.648473311192717,3.24018862342869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3823 | |||
|TSSclassifier=S | |||
|UniProt=G5E965 | |||
|association_with_transcript=-121bp_to_ENST00000327590,uc003don.2_5end | |||
|coexpression_cluster_id=C23 | |||
|description=CAGE_peak_53_at_FOXP1_5end | |||
|id=chr3:71542827..71542838,- | |||
|ontology_enrichment_celltype=CL:0000791!8.59e-40!18;CL:0000789!8.59e-40!18;CL:0002420!8.59e-40!18;CL:0002419!8.59e-40!18;CL:0000790!8.59e-40!18;CL:0000625!1.96e-27!11;CL:0000084!3.13e-27!25;CL:0000827!3.13e-27!25;CL:0000624!1.37e-16!6;CL:0000838!2.97e-15!52;CL:0000542!7.34e-15!53;CL:0000051!7.34e-15!53;CL:0000738!1.28e-12!140;CL:0002087!3.35e-11!119;CL:0000898!3.26e-09!3;CL:0000037!1.17e-08!172;CL:0000566!1.17e-08!172;CL:0002031!1.40e-08!124;CL:0000842!1.50e-08!3;CL:0000623!2.89e-08!3;CL:0000825!2.89e-08!3;CL:0000988!9.90e-08!182;CL:0000815!7.94e-07!2;CL:0000792!7.94e-07!2;CL:0002677!7.94e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.39e-57;18!CL:0000789;3.39e-57;18!CL:0002419;3.39e-57;18!CL:0000084;3.25e-40;25!CL:0000625;1.02e-33;11!CL:0000624;2.85e-29;6!CL:0000898;9.41e-16;3!CL:0000226;2.04e-14;3!CL:0000842;2.04e-14;3!CL:0000623;5.39e-14;3!CL:0000542;2.06e-12;53!CL:0000815;2.77e-11;2!CL:0000792;2.77e-11;2!CL:0002677;2.77e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.15e-57,18;CL:0000789,3.15e-57,18;CL:0002420,3.15e-57,18;CL:0002419,3.15e-57,18;CL:0000790,3.15e-57,18;CL:0000084,3.08e-40,25;CL:0000827,3.08e-40,25;CL:0000625,9.63e-34,11;CL:0000624,2.79e-29,6;CL:0000838,1.59e-25,52;CL:0000542,5.79e-25,53;CL:0000051,5.79e-25,53;CL:0000898,1.17e-15,3;CL:0002087,1.41e-14,115;CL:0000226,1.95e-14,3;CL:0000842,1.95e-14,3;CL:0000623,6.49e-14,3;CL:0000825,6.49e-14,3;CL:0000738,7.16e-13,136;CL:0000815,2.84e-11,2;CL:0000792,2.84e-11,2;CL:0002677,2.84e-11,2;CL:0002031,8.93e-10,120;CL:0000037,1.82e-09,168;CL:0000988,9.84e-09,177;CL:0002032,3.95e-07,161;CL:0000837,3.95e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;3.39e-57;18!CL:0000051;2.06e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.07e-15!15;UBERON:0000179!2.07e-15!15;UBERON:0000463!2.07e-15!15;UBERON:0004177!4.59e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.25e-18;15!UBERON:0000179;1.25e-18;15!UBERON:0000463;1.25e-18;15!UBERON:0002390;6.63e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.48e-18,15;UBERON:0000179,1.48e-18,15;UBERON:0000463,1.48e-18,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,1.08505435357926,0,0.971680998056939,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,4.32761494250433,3.93010762749165,3.70082698199117,1.17030546773475,9.12582346574053,9.9424039204294,1.94826728407911,0.668462741311041,7.36514768687093,4.43067789167242,8.12411591295047,0.25618263945135,0,1.15106533222573,1.10540007114339,1.73881851441031,5.6348894001583,5.61835738988397,5.22677619024884,0.339928028092699,3.06576394881537,3.77990190030893,3.54227568827304,3.82278497188916,3.90650072313851,0.950452044448374,3.312652619711,5.63141089079441,1.24930726552346,2.60454977248419,0.821127996921047,4.83856183739358,2.13952156626806,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,1.41177339907723,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,2.37285620900479,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,0.764637207142375,1.13929437434833,2.62054953003568,2.05681136543097,0.648473311192717,3.24018862342869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,1.41439311330634,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p53@FOXP1 | |||
}} |
Revision as of 01:19, 13 September 2013
Short description: | p53@FOXP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_53_at_FOXP1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | -121bp_to_ENST00000327590, uc003don.2_5end |
EntrezGene: | FOXP1 |
HGNC: | 3823 |
UniProt: | G5E965 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.15e-57 | 18 |
alpha-beta T cell | 3.15e-57 | 18 |
immature T cell | 3.15e-57 | 18 |
mature T cell | 3.15e-57 | 18 |
immature alpha-beta T cell | 3.15e-57 | 18 |
T cell | 3.08e-40 | 25 |
pro-T cell | 3.08e-40 | 25 |
CD8-positive, alpha-beta T cell | 9.63e-34 | 11 |
CD4-positive, alpha-beta T cell | 2.79e-29 | 6 |
lymphoid lineage restricted progenitor cell | 1.59e-25 | 52 |
lymphocyte | 5.79e-25 | 53 |
common lymphoid progenitor | 5.79e-25 | 53 |
naive T cell | 1.17e-15 | 3 |
nongranular leukocyte | 1.41e-14 | 115 |
single nucleate cell | 1.95e-14 | 3 |
mononuclear cell | 1.95e-14 | 3 |
natural killer cell | 6.49e-14 | 3 |
pro-NK cell | 6.49e-14 | 3 |
leukocyte | 7.16e-13 | 136 |
regulatory T cell | 2.84e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.84e-11 | 2 |
naive regulatory T cell | 2.84e-11 | 2 |
hematopoietic lineage restricted progenitor cell | 8.93e-10 | 120 |
hematopoietic stem cell | 1.82e-09 | 168 |
hematopoietic cell | 9.84e-09 | 177 |
hematopoietic oligopotent progenitor cell | 3.95e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.95e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.48e-18 | 15 |
haemolymphatic fluid | 1.48e-18 | 15 |
organism substance | 1.48e-18 | 15 |
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