FFCP PHASE1:Mm9::chr13:91947217..91947224,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69085|HGNC=|MCL_coexpression_id=6|UniProt=E9QQ14,Q8BRH8,Q8R1J3|association_with_transcript=76bp_to_ENSMUST00000022121,ENSMUST00000070886,NM_145453,uc007rkb.1_5end|description=CAGE_peak_3_at_Zcchc9_5end|id=chr13:91947217..91947224,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,4.92e-08,6;CL:0000677,4.92e-08,6;CL:0000584,4.92e-08,6;CL:0000791,1.02e-07,9;CL:0000789,1.02e-07,9;CL:0002420,1.02e-07,9;CL:0002419,1.02e-07,9;CL:0000790,1.02e-07,9;CL:0000075,7.07e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.73e-09,3;DOID:4045,4.73e-09,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.320297694209588,4.88565570695105,2.27499619694768,1.51232105653415,3.50627010962443,0.16787927191189,0.233612640595526,3.35720640948098,0.563154888606667,0.70219357896598,0.171217968225505,0.398860794976682,2.73921167889929,1.48614684112296,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.84877930359606,0.765389611359628,0.397163804803541,0,0.799962113967033,0.45881856213434,0,1.7230479846363,0.215471232685889,0,0.756090389279792,0.221730510655305,0,0,0,0,0.332469290716985,0,1.67412652294763,1.5626706890476,2.61761871986899,8.2352408324342,2.04913645487534,1.45653105909346,0.503587271902309,0.506884656097573,0.734187008646726,0.782391344348039,0,0.439372365468944,0,0.139986421625363,0,0.335565212115473,2.90144856804538,1.34437519656986,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.207379224616955,0.675029691658453,0,0,0,0.489963196859816,0.287536413054709,0,0,0.255374676170375,0,0.131886287730194,0.457438218012048,0.52091337055676,0,0,0.30559649555362,0,0,0.186399445825301,0.37863096666592,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.5709193985953,0.258937883647172,0.742210695324124,0.520455980298408,0,0.461230994512117,0.452167921657868,0.470354828542819,0.125666591329675,0.494389935468748,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.599075622529601,2.39961092397363,0.381210681219194,0.449371918214468,1.37250180845588,0.753926112677186,0.347648640384553,0,0.41557608911912,0.811206315338788,0.712875546952214,0.746441823660558,1.0108910337347,0.420883711772948,0.650602214813519,0.689706313300419,0.360124259610698,0.90422890701429,0.476255494059295,0.896796041993948,0.281105173679186,0,0,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.233530684734339,0.16455984991348,0.164167464079095,0.405344047729279,0.292399974850665,0.219550115291051,0,0.210289948564127,0.205809224758569,0.660837565967596,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.775809948670503,0.631222379012867,0.505892296994058,0.295220295959204,0.31399745568275,0.863780147452604,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.757965647081939,1.14075483509418,0.339490171550376,0.469380496577004,0.837531287209079,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.956728611944923,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.468846746368813,0.163934945376675,0.504941854408746,0.631016438832513,0,0.861693590931196,0,0.445597348164788,0.566153061577665,0.809621403349789,0,0.395287777946524,1.28528526568723,0.567760340833074,0.178065603667255,0.651547837414304,0.659880491890142,0,0.728341908464944,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0,0.713475270408282,0.658196082408484,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.645857706783622,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,0.556275906031529,0,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0.679913719975421,1.81936888020755,1.65839968565309,1.90934123603023,0.632671987162271,1.21991680276109,0.432021363287205,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0,0.168956125490778,0.352071715937262,0.781226309063701,0.419437377702843,1.44950472495604,1.72818003754719,0,0.405450430580328,0.410843828659309,0.77952493786677,0.35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| ||
|EntrezGene=69085 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=E9QQ14,Q8BRH8,Q8R1J3 | |||
|association_with_transcript=76bp_to_ENSMUST00000022121,ENSMUST00000070886,NM_145453,uc007rkb.1_5end | |||
|description=CAGE_peak_3_at_Zcchc9_5end | |||
|id=chr13:91947217..91947224,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.92e-08,6;CL:0000677,4.92e-08,6;CL:0000584,4.92e-08,6;CL:0000791,1.02e-07,9;CL:0000789,1.02e-07,9;CL:0002420,1.02e-07,9;CL:0002419,1.02e-07,9;CL:0000790,1.02e-07,9;CL:0000075,7.07e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.73e-09,3;DOID:4045,4.73e-09,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,4.88565570695105,2.27499619694768,1.51232105653415,3.50627010962443,0.16787927191189,0.233612640595526,3.35720640948098,0.563154888606667,0.70219357896598,0.171217968225505,0.398860794976682,2.73921167889929,1.48614684112296,0,0.202475267389826,0,0.315462165358238,0.137114433605739,0.84877930359606,0.765389611359628,0.397163804803541,0,0.799962113967033,0.45881856213434,0,1.7230479846363,0.215471232685889,0,0.756090389279792,0.221730510655305,0,0,0,0,0.332469290716985,0,1.67412652294763,1.5626706890476,2.61761871986899,8.2352408324342,2.04913645487534,1.45653105909346,0.503587271902309,0.506884656097573,0.734187008646726,0.782391344348039,0,0.439372365468944,0,0.139986421625363,0,0.335565212115473,2.90144856804538,1.34437519656986,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.207379224616955,0.675029691658453,0,0,0,0.489963196859816,0.287536413054709,0,0,0.255374676170375,0,0.131886287730194,0.457438218012048,0.52091337055676,0,0,0.30559649555362,0,0,0.186399445825301,0.37863096666592,0.0755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,0,0.170430322578058,0,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0.253359865475099,0,0.5709193985953,0.258937883647172,0.742210695324124,0.520455980298408,0,0.461230994512117,0.452167921657868,0.470354828542819,0.125666591329675,0.494389935468748,0.722996784599558,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.599075622529601,2.39961092397363,0.381210681219194,0.449371918214468,1.37250180845588,0.753926112677186,0.347648640384553,0,0.41557608911912,0.811206315338788,0.712875546952214,0.746441823660558,1.0108910337347,0.420883711772948,0.650602214813519,0.689706313300419,0.360124259610698,0.90422890701429,0.476255494059295,0.896796041993948,0.281105173679186,0,0,0.756424320671277,1.05570674498369,0.43839146485515,0.556094498451196,0.348252166522167,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0,0,0.36012412292203,0,0.393528463494808,0.154267112887378,0,0.536546802799238,0.233530684734339,0.16455984991348,0.164167464079095,0.405344047729279,0.292399974850665,0.219550115291051,0,0.210289948564127,0.205809224758569,0.660837565967596,0,0.426576501070468,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0.775809948670503,0.631222379012867,0.505892296994058,0.295220295959204,0.31399745568275,0.863780147452604,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0.287696137450811,0,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0.369506380333209,0.757965647081939,1.14075483509418,0.339490171550376,0.469380496577004,0.837531287209079,0.238043640886014,0.195133647857799,0.157635144106191,0.44292937929755,0.956728611944923,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0.321101179975584,0.468846746368813,0.163934945376675,0.504941854408746,0.631016438832513,0,0.861693590931196,0,0.445597348164788,0.566153061577665,0.809621403349789,0,0.395287777946524,1.28528526568723,0.567760340833074,0.178065603667255,0.651547837414304,0.659880491890142,0,0.728341908464944,0.604647113929502,0.377210159511796,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.643011105094777,0,0.713475270408282,0.658196082408484,0.304464949114599,0.23467170806371,0.21183207086382,0.220528398054962,0.49465875882444,0.645857706783622,0.120625849856312,0.477489376012546,0.164140899745061,0.291480836629851,0.556275906031529,0,0.82554747185289,0.185194527369712,0,0.136694227721025,0,0.679913719975421,1.81936888020755,1.65839968565309,1.90934123603023,0.632671987162271,1.21991680276109,0.432021363287205,0.209088296014469,0.655087691238533,0.134864346384821,0.330613822901344,0.26175594198403,0.129614973291793,0,0,0.448549638131936,0.165458490457098,0.583353565032143,0,0.168956125490778,0.352071715937262,0.781226309063701,0.419437377702843,1.44950472495604,1.72818003754719,0,0.405450430580328,0.410843828659309,0.77952493786677,0.358053391334963,0,0.120195449519969,0.443068581523732,0.100966449948148,0.15241361331,0.403304740547362,0.0974578807397524,0.288635524920988,0.584384510907845,0,1.33191572024439,0.538283139656854,0.503653849092235,0.386379188064381,0,0.549454872801795,0.214368379079066,0,0,0.460325236507177,0,0.515559547031063,0,0.755393897389701,1.35004500046361,0,0.453142408984205,0,0.830298780673413,0.399024873401031,0.512200817262403,0.243106717068294,0,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,1.01078884705519,0.50695859978048,0.377252682772152,0.280924522409647,0.448176066834085,0.34461281373368,0.476293691283074,0.927074607558844,0.38581844092741,0.41208590080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| |||
|short_description=p3@Zcchc9 | |||
}} | |||
Revision as of 01:15, 13 September 2013
| Short description: | p3@Zcchc9 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Zcchc9_5end |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | 76bp_to_ENSMUST00000022121, ENSMUST00000070886, NM_145453, uc007rkb.1_5end |
| EntrezGene: | Zcchc9 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| brush border epithelial cell | 4.92e-08 | 6 |
| gut absorptive cell | 4.92e-08 | 6 |
| enterocyte | 4.92e-08 | 6 |
| mature alpha-beta T cell | 1.02e-07 | 9 |
| alpha-beta T cell | 1.02e-07 | 9 |
| immature T cell | 1.02e-07 | 9 |
| mature T cell | 1.02e-07 | 9 |
| immature alpha-beta T cell | 1.02e-07 | 9 |
| columnar/cuboidal epithelial cell | 7.07e-07 | 7 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system cancer | 4.73e-09 | 3 |
| muscle cancer | 4.73e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
