FFCP PHASE1:Hg19::chr3:57260377..57260399,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8820|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4877|TSSclassifier=S|UniProt=Q9UBX0|association_with_transcript=149bp_to_ENST00000495160_5end|coexpression_cluster_id=C44|description=CAGE_peak_2_at_HESX1_5end|id=chr3:57260377..57260399,-|ontology_enrichment_celltype=CL:0002009!2.47e-33!65;CL:0002194!1.27e-32!63;CL:0000576!1.27e-32!63;CL:0000040!1.27e-32!63;CL:0000559!1.27e-32!63;CL:0000557!1.25e-29!71;CL:0000763!9.26e-29!112;CL:0000049!9.26e-29!112;CL:0000839!2.44e-28!70;CL:0000766!2.67e-25!76;CL:0000037!3.48e-21!172;CL:0000566!3.48e-21!172;CL:0002057!5.38e-20!42;CL:0000988!3.21e-19!182;CL:0002032!3.59e-19!165;CL:0000837!3.59e-19!165;CL:0000860!3.19e-18!45;CL:0002087!1.42e-16!119;CL:0002031!1.58e-16!124;CL:0000738!1.72e-16!140;CL:0000451!7.89e-09!10;CL:0002393!6.32e-08!9;CL:0002397!6.32e-08!9;CL:0002619!2.18e-07!3;CL:0000784!2.33e-07!3|ontology_enrichment_celltype_v019=CL:0000860;5.51e-16;33!CL:0002057;5.51e-16;33!CL:0000473;6.15e-16;39!CL:0000234;6.15e-16;39!CL:0000037;2.62e-10;1!CL:0001024;2.62e-10;1!CL:0000763;7.26e-10;100!CL:0000576;4.73e-08;48!CL:0000235;6.88e-07;6|ontology_enrichment_celltype_v019_2=CL:0000473,1.63e-17,48;CL:0000234,1.63e-17,48;CL:0000763,2.72e-16,108;CL:0000049,2.72e-16,108;CL:0002194,1.03e-13,59;CL:0000576,1.03e-13,59;CL:0000040,1.03e-13,59;CL:0000559,1.03e-13,59;CL:0002009,3.18e-13,61;CL:0000860,5.03e-13,42;CL:0002057,5.03e-13,42;CL:0000037,8.55e-13,168;CL:0000839,3.99e-12,66;CL:0000988,5.27e-12,177;CL:0000557,6.33e-12,67;CL:0000766,5.27e-11,72;CL:0002032,3.87e-10,161;CL:0000837,3.87e-10,161;CL:0001024,4.33e-10,1;CL:0000235,7.52e-07,6|ontology_enrichment_development_v019=CL:0000049;2.56e-09;108!CL:0002057;2.71e-09;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;3.27e-07;31|ontology_enrichment_disease_v019_2=DOID:8692,3.49e-07,31|ontology_enrichment_uberon=UBERON:0002371!6.38e-27!80;UBERON:0001474!2.70e-24!86;UBERON:0002390!4.28e-24!102;UBERON:0003061!4.28e-24!102;UBERON:0002405!6.61e-24!115;UBERON:0002193!1.45e-23!112;UBERON:0004765!2.29e-20!101;UBERON:0001434!2.29e-20!101;UBERON:0002204!2.40e-11!167;UBERON:0003081!2.73e-09!216|ontology_enrichment_uberon_v019=UBERON:0000029;2.62e-10;1!UBERON:0001000;2.62e-10;1!UBERON:0005352;2.62e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-12,76;UBERON:0002405,5.44e-12,93;UBERON:0001474,1.60e-11,82;UBERON:0000029,1.43e-10,1;UBERON:0001000,1.73e-10,1;UBERON:0005352,1.73e-10,1;UBERON:0004765,2.34e-10,90;UBERON:0002193,4.51e-10,108;UBERON:0002390,2.22e-09,98;UBERON:0003061,2.22e-09,98;UBERON:0001434,3.69e-09,100;UBERON:0002204,5.57e-07,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,1.17440175733939,0,0,0.217010870715852,0.671746422719773,0.647787332037959,0.515151135268373,0,0,0,0,0,0,0.575384784644301,0.512321413058201,2.36482229888585,0.344745680736619,0,0,0,0,0,1.53041946185451,0,0.639337125799041,1.9791078011203,2.79249120670285,4.68847225585964,0.870627715885752,0,0,0.502497330513487,0,1.52032191293582,4.23779651843358,0.736555271975129,1.89877432464531,0.211255286311942,0.850417199860174,0.838634582033504,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.696518949197069,0.398873881556595,0.238490624305342,29.7437353605666,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21856744815642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766021480529467,1.05836791361941,0,2.52717460302113,1.82587743226554,0,2.50634477090067,1.35433422241283,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0.364909578431332,0,0,1.97292201424695,0,0.30607276163049,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4877 | |||
|TSSclassifier=S | |||
|UniProt=Q9UBX0 | |||
|association_with_transcript=149bp_to_ENST00000495160_5end | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_2_at_HESX1_5end | |||
|id=chr3:57260377..57260399,- | |||
|ontology_enrichment_celltype=CL:0002009!2.47e-33!65;CL:0002194!1.27e-32!63;CL:0000576!1.27e-32!63;CL:0000040!1.27e-32!63;CL:0000559!1.27e-32!63;CL:0000557!1.25e-29!71;CL:0000763!9.26e-29!112;CL:0000049!9.26e-29!112;CL:0000839!2.44e-28!70;CL:0000766!2.67e-25!76;CL:0000037!3.48e-21!172;CL:0000566!3.48e-21!172;CL:0002057!5.38e-20!42;CL:0000988!3.21e-19!182;CL:0002032!3.59e-19!165;CL:0000837!3.59e-19!165;CL:0000860!3.19e-18!45;CL:0002087!1.42e-16!119;CL:0002031!1.58e-16!124;CL:0000738!1.72e-16!140;CL:0000451!7.89e-09!10;CL:0002393!6.32e-08!9;CL:0002397!6.32e-08!9;CL:0002619!2.18e-07!3;CL:0000784!2.33e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.51e-16;33!CL:0002057;5.51e-16;33!CL:0000473;6.15e-16;39!CL:0000234;6.15e-16;39!CL:0000037;2.62e-10;1!CL:0001024;2.62e-10;1!CL:0000763;7.26e-10;100!CL:0000576;4.73e-08;48!CL:0000235;6.88e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.63e-17,48;CL:0000234,1.63e-17,48;CL:0000763,2.72e-16,108;CL:0000049,2.72e-16,108;CL:0002194,1.03e-13,59;CL:0000576,1.03e-13,59;CL:0000040,1.03e-13,59;CL:0000559,1.03e-13,59;CL:0002009,3.18e-13,61;CL:0000860,5.03e-13,42;CL:0002057,5.03e-13,42;CL:0000037,8.55e-13,168;CL:0000839,3.99e-12,66;CL:0000988,5.27e-12,177;CL:0000557,6.33e-12,67;CL:0000766,5.27e-11,72;CL:0002032,3.87e-10,161;CL:0000837,3.87e-10,161;CL:0001024,4.33e-10,1;CL:0000235,7.52e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000049;2.56e-09;108!CL:0002057;2.71e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;3.27e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.49e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.38e-27!80;UBERON:0001474!2.70e-24!86;UBERON:0002390!4.28e-24!102;UBERON:0003061!4.28e-24!102;UBERON:0002405!6.61e-24!115;UBERON:0002193!1.45e-23!112;UBERON:0004765!2.29e-20!101;UBERON:0001434!2.29e-20!101;UBERON:0002204!2.40e-11!167;UBERON:0003081!2.73e-09!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.62e-10;1!UBERON:0001000;2.62e-10;1!UBERON:0005352;2.62e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-12,76;UBERON:0002405,5.44e-12,93;UBERON:0001474,1.60e-11,82;UBERON:0000029,1.43e-10,1;UBERON:0001000,1.73e-10,1;UBERON:0005352,1.73e-10,1;UBERON:0004765,2.34e-10,90;UBERON:0002193,4.51e-10,108;UBERON:0002390,2.22e-09,98;UBERON:0003061,2.22e-09,98;UBERON:0001434,3.69e-09,100;UBERON:0002204,5.57e-07,167 | |||
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|short_description=p2@HESX1 | |||
}} |
Revision as of 00:58, 13 September 2013
Short description: | p2@HESX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_HESX1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 149bp_to_ENST00000495160_5end |
EntrezGene: | HESX1 |
HGNC: | 4877 |
UniProt: | Q9UBX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.63e-17 | 48 |
phagocyte | 1.63e-17 | 48 |
myeloid cell | 2.72e-16 | 108 |
common myeloid progenitor | 2.72e-16 | 108 |
monopoietic cell | 1.03e-13 | 59 |
monocyte | 1.03e-13 | 59 |
monoblast | 1.03e-13 | 59 |
promonocyte | 1.03e-13 | 59 |
macrophage dendritic cell progenitor | 3.18e-13 | 61 |
classical monocyte | 5.03e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.03e-13 | 42 |
hematopoietic stem cell | 8.55e-13 | 168 |
myeloid lineage restricted progenitor cell | 3.99e-12 | 66 |
hematopoietic cell | 5.27e-12 | 177 |
granulocyte monocyte progenitor cell | 6.33e-12 | 67 |
myeloid leukocyte | 5.27e-11 | 72 |
hematopoietic oligopotent progenitor cell | 3.87e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.87e-10 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.33e-10 | 1 |
macrophage | 7.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-12 | 76 |
immune system | 5.44e-12 | 93 |
bone element | 1.60e-11 | 82 |
lymph node | 1.43e-10 | 1 |
vas deferens | 1.73e-10 | 1 |
spermatic cord | 1.73e-10 | 1 |
skeletal element | 2.34e-10 | 90 |
hemolymphoid system | 4.51e-10 | 108 |
hematopoietic system | 2.22e-09 | 98 |
blood island | 2.22e-09 | 98 |
skeletal system | 3.69e-09 | 100 |
musculoskeletal system | 5.57e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.49e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.