FFCP PHASE1:Hg19::chr3:56835941..56835961,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=50650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |||
|TSSclassifier=S | |||
|UniProt=C9J586 | |||
|association_with_transcript=15bp_to_ENST00000495373_5end | |||
|description=CAGE_peak_2_at_ARHGEF3_5end | |||
|id=chr3:56835941..56835961,- | |||
|ontology_enrichment_celltype=CL:0002087!6.07e-13!119;CL:0002057!9.91e-12!42;CL:0000791!1.35e-10!18;CL:0000789!1.35e-10!18;CL:0002420!1.35e-10!18;CL:0002419!1.35e-10!18;CL:0000790!1.35e-10!18;CL:0000738!1.41e-10!140;CL:0002031!7.27e-10!124;CL:0000860!1.12e-09!45;CL:0000625!7.12e-08!11;CL:0002194!2.91e-07!63;CL:0000576!2.91e-07!63;CL:0000040!2.91e-07!63;CL:0000559!2.91e-07!63;CL:0002009!7.54e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.70e-11;18!CL:0000789;2.70e-11;18!CL:0002419;2.70e-11;18!CL:0000860;5.00e-09;33!CL:0002057;5.00e-09;33!CL:0000625;2.29e-08;11!CL:0000473;9.85e-08;39!CL:0000234;9.85e-08;39!CL:0000576;2.98e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.25e-15,115;CL:0000860,1.83e-12,42;CL:0002057,1.83e-12,42;CL:0000738,2.03e-12,136;CL:0000473,4.63e-12,48;CL:0000234,4.63e-12,48;CL:0002031,8.12e-12,120;CL:0000791,3.01e-11,18;CL:0000789,3.01e-11,18;CL:0002420,3.01e-11,18;CL:0002419,3.01e-11,18;CL:0000790,3.01e-11,18;CL:0002194,2.45e-09,59;CL:0000576,2.45e-09,59;CL:0000040,2.45e-09,59;CL:0000559,2.45e-09,59;CL:0002009,2.05e-08,61;CL:0000625,2.48e-08,11;CL:0000766,1.15e-07,72;CL:0000037,3.76e-07,168;CL:0000839,4.85e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000790;2.70e-11;18!CL:0002057;3.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.65e-28!115;UBERON:0003075!8.22e-15!86;UBERON:0007284!8.22e-15!86;UBERON:0001049!1.51e-14!57;UBERON:0005068!1.51e-14!57;UBERON:0006241!1.51e-14!57;UBERON:0007135!1.51e-14!57;UBERON:0002346!4.65e-14!90;UBERON:0003080!7.82e-14!42;UBERON:0002780!8.72e-14!41;UBERON:0001890!8.72e-14!41;UBERON:0006240!8.72e-14!41;UBERON:0002616!4.29e-13!59;UBERON:0003056!4.79e-13!61;UBERON:0005743!3.74e-12!86;UBERON:0001893!9.92e-12!34;UBERON:0001869!1.13e-11!32;UBERON:0000955!1.79e-11!69;UBERON:0006238!1.79e-11!69;UBERON:0000153!2.59e-11!129;UBERON:0007811!2.59e-11!129;UBERON:0002791!2.98e-11!33;UBERON:0002619!3.62e-11!22;UBERON:0002020!3.79e-11!34;UBERON:0003528!3.79e-11!34;UBERON:0001017!8.97e-11!82;UBERON:0000073!1.27e-10!94;UBERON:0001016!1.27e-10!94;UBERON:0001950!2.27e-10!20;UBERON:0000033!4.78e-10!123;UBERON:0000956!1.03e-09!25;UBERON:0000203!1.03e-09!25;UBERON:0002193!1.42e-07!112;UBERON:0002390!1.59e-07!102;UBERON:0003061!1.59e-07!102;UBERON:0004121!1.67e-07!169;UBERON:0000924!2.82e-07!173;UBERON:0006601!2.82e-07!173 | |||
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| |||
|short_description=p2@ARHGEF3 | |||
}} |
Revision as of 00:58, 13 September 2013
Short description: | p2@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARHGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000495373_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | C9J586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.25e-15 | 115 |
classical monocyte | 1.83e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-12 | 42 |
leukocyte | 2.03e-12 | 136 |
defensive cell | 4.63e-12 | 48 |
phagocyte | 4.63e-12 | 48 |
hematopoietic lineage restricted progenitor cell | 8.12e-12 | 120 |
mature alpha-beta T cell | 3.01e-11 | 18 |
alpha-beta T cell | 3.01e-11 | 18 |
immature T cell | 3.01e-11 | 18 |
mature T cell | 3.01e-11 | 18 |
immature alpha-beta T cell | 3.01e-11 | 18 |
monopoietic cell | 2.45e-09 | 59 |
monocyte | 2.45e-09 | 59 |
monoblast | 2.45e-09 | 59 |
promonocyte | 2.45e-09 | 59 |
macrophage dendritic cell progenitor | 2.05e-08 | 61 |
CD8-positive, alpha-beta T cell | 2.48e-08 | 11 |
myeloid leukocyte | 1.15e-07 | 72 |
hematopoietic stem cell | 3.76e-07 | 168 |
myeloid lineage restricted progenitor cell | 4.85e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.