FFCP PHASE1:Hg19::chr3:56789155..56789207,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=50650|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=683|TSSclassifier=S|UniProt=Q9NR81|association_with_transcript=0bp_to_AK024340_5end|coexpression_cluster_id=C1886|description=CAGE_peak_6_at_ARHGEF3_5end|id=chr3:56789155..56789207,-|ontology_enrichment_celltype=CL:0002087!9.87e-43!119;CL:0000738!1.76e-41!140;CL:0000037!4.50e-41!172;CL:0000566!4.50e-41!172;CL:0002031!1.50e-38!124;CL:0002032!5.88e-38!165;CL:0000837!5.88e-38!165;CL:0000988!5.52e-37!182;CL:0002194!9.62e-29!63;CL:0000576!9.62e-29!63;CL:0000040!9.62e-29!63;CL:0000559!9.62e-29!63;CL:0002009!4.95e-28!65;CL:0000557!2.15e-27!71;CL:0000766!7.08e-27!76;CL:0000839!7.87e-27!70;CL:0002057!1.39e-26!42;CL:0000860!2.29e-24!45;CL:0000763!3.30e-24!112;CL:0000049!3.30e-24!112;CL:0000542!2.19e-12!53;CL:0000051!2.19e-12!53;CL:0000838!4.17e-12!52;CL:0000791!2.99e-10!18;CL:0000789!2.99e-10!18;CL:0002420!2.99e-10!18;CL:0002419!2.99e-10!18;CL:0000790!2.99e-10!18;CL:0000236!3.18e-08!14;CL:0002393!3.20e-08!9;CL:0002397!3.20e-08!9;CL:0000625!3.78e-08!11|ontology_enrichment_celltype_v019=CL:0000860;4.71e-27;33!CL:0002057;4.71e-27;33!CL:0000576;5.33e-27;48!CL:0000473;5.68e-24;39!CL:0000234;5.68e-24;39!CL:0000766;1.16e-17;69!CL:0002087;1.07e-16;104!CL:0000791;7.98e-16;18!CL:0000789;7.98e-16;18!CL:0002419;7.98e-16;18!CL:0000236;1.33e-12;13!CL:0000625;5.42e-12;11!CL:0000738;2.42e-11;136!CL:0000763;3.34e-11;100!CL:0000084;5.16e-10;25!CL:0000542;5.22e-10;53!CL:0000988;6.64e-08;177!CL:0002393;7.62e-08;6!CL:0002397;7.62e-08;6!CL:0002138;2.94e-07;6|ontology_enrichment_celltype_v019_2=CL:0002087,3.44e-60,115;CL:0000738,3.48e-54,136;CL:0000037,3.66e-52,168;CL:0002031,1.90e-51,120;CL:0000988,6.65e-48,177;CL:0002032,2.77e-47,161;CL:0000837,2.77e-47,161;CL:0002194,5.44e-43,59;CL:0000576,5.44e-43,59;CL:0000040,5.44e-43,59;CL:0000559,5.44e-43,59;CL:0000473,2.96e-42,48;CL:0000234,2.96e-42,48;CL:0002009,5.08e-41,61;CL:0000860,2.65e-40,42;CL:0002057,2.65e-40,42;CL:0000766,1.56e-37,72;CL:0000557,1.76e-37,67;CL:0000839,1.26e-36,66;CL:0000763,6.91e-30,108;CL:0000049,6.91e-30,108;CL:0000838,8.50e-16,52;CL:0000791,1.05e-15,18;CL:0000789,1.05e-15,18;CL:0002420,1.05e-15,18;CL:0002419,1.05e-15,18;CL:0000790,1.05e-15,18;CL:0000542,2.59e-15,53;CL:0000051,2.59e-15,53;CL:0002393,4.07e-12,9;CL:0002397,4.07e-12,9;CL:0000625,5.30e-12,11;CL:0000236,1.65e-11,14;CL:0000134,5.37e-11,354;CL:0002320,2.73e-10,361;CL:0000084,6.17e-10,25;CL:0000827,6.17e-10,25;CL:0000115,5.23e-08,36;CL:0000219,7.01e-08,386;CL:0000034,1.96e-07,441;CL:0005020,3.10e-07,6;CL:0002138,3.10e-07,6;CL:0005022,3.10e-07,6;CL:0000048,3.24e-07,427;CL:0000723,8.77e-07,433|ontology_enrichment_development_v019=CL:0002057;6.72e-29;42!CL:0000790;7.98e-16;18!CL:0000051;5.22e-10;53!CL:0000049;8.04e-10;108!CL:0005022;2.94e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.92e-32!112;UBERON:0002390!8.28e-29!102;UBERON:0003061!8.28e-29!102;UBERON:0002371!9.51e-23!80;UBERON:0002405!3.38e-22!115;UBERON:0001474!4.36e-20!86;UBERON:0004765!3.47e-14!101;UBERON:0001434!3.47e-14!101;UBERON:0003081!1.06e-10!216;UBERON:0007023!3.84e-09!115|ontology_enrichment_uberon_v019=UBERON:0000178;5.13e-09;15!UBERON:0000179;5.13e-09;15!UBERON:0000463;5.13e-09;15!UBERON:0002193;6.44e-09;42!UBERON:0002465;7.88e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.47e-49,108;UBERON:0002390,9.35e-43,98;UBERON:0003061,9.35e-43,98;UBERON:0002405,3.79e-40,93;UBERON:0002371,9.14e-33,76;UBERON:0001474,4.21e-29,82;UBERON:0004765,5.27e-25,90;UBERON:0001434,7.59e-21,100;UBERON:0003081,1.05e-18,203;UBERON:0002384,3.53e-10,371;UBERON:0000178,5.16e-09,15;UBERON:0000179,5.16e-09,15;UBERON:0000463,5.16e-09,15;UBERON:0002465,8.78e-07,10;UBERON:0002204,9.53e-07,167|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.236132343941038,7.86728553697808,5.37361157336098,6.34746105595912,0,0,0,0,0,12.0376180127287,1.66198622559563,2.60707781711184,2.38711957787437,4.70222495903841,5.50619232232265,7.46969146139141,13.2312397289404,12.4699061417307,16.9808842831471,2.09186133215116,2.05583944010913,1.85823822537062,5.17846306179871,7.94098190240212,10.8781825748749,2.41321976515633,5.80936215225443,1.35426486594342,6.02375486536335,3.82068610080984,4.04502272001152,4.89734227793444,2.88836124368484,5.75403413219137,9.23583640522805,16.1565562673522,21.7374622771674,0.870627715885752,0,0,5.27622197039161,8.86520961314342,11.9453864587814,2.42159801053347,2.20966581592539,2.84816148696796,19.4354863406986,17.4335525971336,16.7726916406701,12.019163532675,10.8127362845885,14.7867539761314,19.3808665744049,21.4830011375017,23.7463399894024,19.3595868907455,21.8455444504853,16.9006758234075,12.8019066769952,22.4221752740167,16.66782075868,16.5261218196216,17.1729675816366,6.26134266020393,5.87237189370939,2.6759125968766,10.5737062863221,12.8916969485753,3.95076127162616,3.3440660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,0.0852134047591577,0.846774100381858,0,0,0,0.223710863595585,0,0,0,0.307988420568741,0,0.485710993059139,0,0,0,0,0,0,0.694567422971502,0.218559560503957,0,0.490296643507811,0,0.392616934229891,0.297046400327086,0.4226557275834,0,4.60521198101283,6.70362034925203,0,0,0,0.0802413666891683,0,0.917458566809082,0.143339583151451,0,0.135982980381829,0,2.1161073620616,0.371995018166751,0,0,0,0,0,0,0,0.36757959813938,0.50141507858475,0.606229585745915,0.267964130156178,0,0.103432995861895,0,0,1.0334225573761,0.993195428733726,0,0.190941474834495,0.404234377916439,0,0,2.02056159043763,1.14755528628282,0.665320713092027,0,0,0,0,0,1.22241444182866,0.406896178315738,0,3.22038069745642,0.320568492303233|short_description=p6@ARHGEF3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=50650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=683 | |||
|TSSclassifier=S | |||
|UniProt=Q9NR81 | |||
|association_with_transcript=0bp_to_AK024340_5end | |||
|coexpression_cluster_id=C1886 | |||
|description=CAGE_peak_6_at_ARHGEF3_5end | |||
|id=chr3:56789155..56789207,- | |||
|ontology_enrichment_celltype=CL:0002087!9.87e-43!119;CL:0000738!1.76e-41!140;CL:0000037!4.50e-41!172;CL:0000566!4.50e-41!172;CL:0002031!1.50e-38!124;CL:0002032!5.88e-38!165;CL:0000837!5.88e-38!165;CL:0000988!5.52e-37!182;CL:0002194!9.62e-29!63;CL:0000576!9.62e-29!63;CL:0000040!9.62e-29!63;CL:0000559!9.62e-29!63;CL:0002009!4.95e-28!65;CL:0000557!2.15e-27!71;CL:0000766!7.08e-27!76;CL:0000839!7.87e-27!70;CL:0002057!1.39e-26!42;CL:0000860!2.29e-24!45;CL:0000763!3.30e-24!112;CL:0000049!3.30e-24!112;CL:0000542!2.19e-12!53;CL:0000051!2.19e-12!53;CL:0000838!4.17e-12!52;CL:0000791!2.99e-10!18;CL:0000789!2.99e-10!18;CL:0002420!2.99e-10!18;CL:0002419!2.99e-10!18;CL:0000790!2.99e-10!18;CL:0000236!3.18e-08!14;CL:0002393!3.20e-08!9;CL:0002397!3.20e-08!9;CL:0000625!3.78e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.71e-27;33!CL:0002057;4.71e-27;33!CL:0000576;5.33e-27;48!CL:0000473;5.68e-24;39!CL:0000234;5.68e-24;39!CL:0000766;1.16e-17;69!CL:0002087;1.07e-16;104!CL:0000791;7.98e-16;18!CL:0000789;7.98e-16;18!CL:0002419;7.98e-16;18!CL:0000236;1.33e-12;13!CL:0000625;5.42e-12;11!CL:0000738;2.42e-11;136!CL:0000763;3.34e-11;100!CL:0000084;5.16e-10;25!CL:0000542;5.22e-10;53!CL:0000988;6.64e-08;177!CL:0002393;7.62e-08;6!CL:0002397;7.62e-08;6!CL:0002138;2.94e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.44e-60,115;CL:0000738,3.48e-54,136;CL:0000037,3.66e-52,168;CL:0002031,1.90e-51,120;CL:0000988,6.65e-48,177;CL:0002032,2.77e-47,161;CL:0000837,2.77e-47,161;CL:0002194,5.44e-43,59;CL:0000576,5.44e-43,59;CL:0000040,5.44e-43,59;CL:0000559,5.44e-43,59;CL:0000473,2.96e-42,48;CL:0000234,2.96e-42,48;CL:0002009,5.08e-41,61;CL:0000860,2.65e-40,42;CL:0002057,2.65e-40,42;CL:0000766,1.56e-37,72;CL:0000557,1.76e-37,67;CL:0000839,1.26e-36,66;CL:0000763,6.91e-30,108;CL:0000049,6.91e-30,108;CL:0000838,8.50e-16,52;CL:0000791,1.05e-15,18;CL:0000789,1.05e-15,18;CL:0002420,1.05e-15,18;CL:0002419,1.05e-15,18;CL:0000790,1.05e-15,18;CL:0000542,2.59e-15,53;CL:0000051,2.59e-15,53;CL:0002393,4.07e-12,9;CL:0002397,4.07e-12,9;CL:0000625,5.30e-12,11;CL:0000236,1.65e-11,14;CL:0000134,5.37e-11,354;CL:0002320,2.73e-10,361;CL:0000084,6.17e-10,25;CL:0000827,6.17e-10,25;CL:0000115,5.23e-08,36;CL:0000219,7.01e-08,386;CL:0000034,1.96e-07,441;CL:0005020,3.10e-07,6;CL:0002138,3.10e-07,6;CL:0005022,3.10e-07,6;CL:0000048,3.24e-07,427;CL:0000723,8.77e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.72e-29;42!CL:0000790;7.98e-16;18!CL:0000051;5.22e-10;53!CL:0000049;8.04e-10;108!CL:0005022;2.94e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.92e-32!112;UBERON:0002390!8.28e-29!102;UBERON:0003061!8.28e-29!102;UBERON:0002371!9.51e-23!80;UBERON:0002405!3.38e-22!115;UBERON:0001474!4.36e-20!86;UBERON:0004765!3.47e-14!101;UBERON:0001434!3.47e-14!101;UBERON:0003081!1.06e-10!216;UBERON:0007023!3.84e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.13e-09;15!UBERON:0000179;5.13e-09;15!UBERON:0000463;5.13e-09;15!UBERON:0002193;6.44e-09;42!UBERON:0002465;7.88e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.47e-49,108;UBERON:0002390,9.35e-43,98;UBERON:0003061,9.35e-43,98;UBERON:0002405,3.79e-40,93;UBERON:0002371,9.14e-33,76;UBERON:0001474,4.21e-29,82;UBERON:0004765,5.27e-25,90;UBERON:0001434,7.59e-21,100;UBERON:0003081,1.05e-18,203;UBERON:0002384,3.53e-10,371;UBERON:0000178,5.16e-09,15;UBERON:0000179,5.16e-09,15;UBERON:0000463,5.16e-09,15;UBERON:0002465,8.78e-07,10;UBERON:0002204,9.53e-07,167 | |||
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| |||
|short_description=p6@ARHGEF3 | |||
}} |
Revision as of 00:57, 13 September 2013
Short description: | p6@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ARHGEF3_5end |
Coexpression cluster: | C1886_CD14CD16_CD14_CD19_Basophils_CD133_renal_blood |
Association with transcript: | 0bp_to_AK024340_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | Q9NR81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.47e-49 | 108 |
hematopoietic system | 9.35e-43 | 98 |
blood island | 9.35e-43 | 98 |
immune system | 3.79e-40 | 93 |
bone marrow | 9.14e-33 | 76 |
bone element | 4.21e-29 | 82 |
skeletal element | 5.27e-25 | 90 |
skeletal system | 7.59e-21 | 100 |
lateral plate mesoderm | 1.05e-18 | 203 |
connective tissue | 3.53e-10 | 371 |
blood | 5.16e-09 | 15 |
haemolymphatic fluid | 5.16e-09 | 15 |
organism substance | 5.16e-09 | 15 |
lymphoid system | 8.78e-07 | 10 |
musculoskeletal system | 9.53e-07 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.