FFCP PHASE1:Hg19::chr3:50648941..50648958,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7867|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6888|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000486712_5end|coexpression_cluster_id=C54|description=CAGE_peak_7_at_MAPKAPK3_5end|id=chr3:50648941..50648958,+|ontology_enrichment_celltype=CL:0000763!1.77e-20!112;CL:0000049!1.77e-20!112;CL:0000988!9.45e-16!182;CL:0000037!5.10e-15!172;CL:0000566!5.10e-15!172;CL:0002032!2.43e-14!165;CL:0000837!2.43e-14!165;CL:0000557!1.51e-13!71;CL:0002057!5.54e-13!42;CL:0000766!6.81e-12!76;CL:0000839!8.06e-12!70;CL:0002009!9.45e-12!65;CL:0000860!1.37e-11!45;CL:0002194!2.09e-11!63;CL:0000576!2.09e-11!63;CL:0000040!2.09e-11!63;CL:0000559!2.09e-11!63;CL:0000738!2.42e-08!140;CL:0002031!1.78e-07!124;CL:0002087!4.14e-07!119|ontology_enrichment_celltype_v019=CL:0000473;2.64e-13;39!CL:0000234;2.64e-13;39!CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000576;4.40e-07;48!CL:0000840;4.66e-07;5|ontology_enrichment_celltype_v019_2=CL:0000763,2.90e-18,108;CL:0000049,2.90e-18,108;CL:0002194,1.97e-15,59;CL:0000576,1.97e-15,59;CL:0000040,1.97e-15,59;CL:0000559,1.97e-15,59;CL:0000557,7.84e-15,67;CL:0002009,8.41e-15,61;CL:0002032,1.27e-13,161;CL:0000837,1.27e-13,161;CL:0000766,1.31e-13,72;CL:0000839,2.16e-13,66;CL:0000473,3.88e-13,48;CL:0000234,3.88e-13,48;CL:0000037,9.01e-13,168;CL:0000988,8.84e-12,177;CL:0000860,3.05e-11,42;CL:0002057,3.05e-11,42;CL:0002087,4.40e-09,115;CL:0002031,1.61e-08,120;CL:0000738,6.35e-08,136;CL:0000840,4.67e-07,5;CL:0001029,4.67e-07,5|ontology_enrichment_development_v019=CL:0002057;5.67e-09;42|ontology_enrichment_disease=DOID:8692!2.74e-09!31;DOID:1240!1.90e-08!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.76e-14!102;UBERON:0003061!1.76e-14!102;UBERON:0002193!1.02e-12!112;UBERON:0002405!4.64e-12!115;UBERON:0002371!8.07e-11!80;UBERON:0001474!5.82e-10!86;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-12,76;UBERON:0001474,2.24e-11,82;UBERON:0002405,7.96e-11,93;UBERON:0002390,4.69e-10,98;UBERON:0003061,4.69e-10,98;UBERON:0004765,5.24e-10,90;UBERON:0002193,9.83e-09,108;UBERON:0001434,1.31e-08,100|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0.290796477559129,0,0.242584061187816,0,0.411167888021826,0,3.45230870786581,4.61089271752381,3.78371567821736,0,1.29096936716765,0,0,0.818718450173537,0,0.612167784741805,0.320929027076094,0,1.64925650093358,3.78980949481101,3.40979800426155,0,0.56738522469114,0.622822248995575,6.78371396193207,3.65038042894141,4.99534342821768,0,1.10483290796269,1.58231193720442,0.422510572623884,0,0,0,0.450530678524519,0.16072558669708,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0,4.34684888015763,0,0,0,1.44833593950726,0,0,0,3.33037431286755,3.51160238411671,2.30213066445147,1.38175008892924,2.89803085735052,0,0.267540828089713,0,2.15287751125376,0.383220493601921,0,0,0,0.651083453856419,0,0,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.982343066232845,0,0,30.1829076098856,24.9005524337952,29.1177933536315,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,3.80265104465493,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,1.40402559083543,1.78357394746474,0,0.16798212819886,0,0,0,0,0.985326475791887,0.264145302039678,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79336230389644,0,0.215627574859517,0,0,0,0,0,0,0,2.99161459204025,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0.476463550915578,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,1.12318871245384,0,0.47003968731907,5.01268954180134,0.677167111206413,0.963528450622197,3.22879531505676,0,0,0,0.223676107892416,0,0,0.278406173895242,1.23087398947712,0,0.33307196799782,0,0,0.293016358543788,0,2.00598091699461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0.0927680981618513,0,0.260427761085233,0.262379999988587,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7867 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6888 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000486712_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_7_at_MAPKAPK3_5end | |||
|id=chr3:50648941..50648958,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.77e-20!112;CL:0000049!1.77e-20!112;CL:0000988!9.45e-16!182;CL:0000037!5.10e-15!172;CL:0000566!5.10e-15!172;CL:0002032!2.43e-14!165;CL:0000837!2.43e-14!165;CL:0000557!1.51e-13!71;CL:0002057!5.54e-13!42;CL:0000766!6.81e-12!76;CL:0000839!8.06e-12!70;CL:0002009!9.45e-12!65;CL:0000860!1.37e-11!45;CL:0002194!2.09e-11!63;CL:0000576!2.09e-11!63;CL:0000040!2.09e-11!63;CL:0000559!2.09e-11!63;CL:0000738!2.42e-08!140;CL:0002031!1.78e-07!124;CL:0002087!4.14e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.64e-13;39!CL:0000234;2.64e-13;39!CL:0000860;4.46e-13;33!CL:0002057;4.46e-13;33!CL:0000576;4.40e-07;48!CL:0000840;4.66e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.90e-18,108;CL:0000049,2.90e-18,108;CL:0002194,1.97e-15,59;CL:0000576,1.97e-15,59;CL:0000040,1.97e-15,59;CL:0000559,1.97e-15,59;CL:0000557,7.84e-15,67;CL:0002009,8.41e-15,61;CL:0002032,1.27e-13,161;CL:0000837,1.27e-13,161;CL:0000766,1.31e-13,72;CL:0000839,2.16e-13,66;CL:0000473,3.88e-13,48;CL:0000234,3.88e-13,48;CL:0000037,9.01e-13,168;CL:0000988,8.84e-12,177;CL:0000860,3.05e-11,42;CL:0002057,3.05e-11,42;CL:0002087,4.40e-09,115;CL:0002031,1.61e-08,120;CL:0000738,6.35e-08,136;CL:0000840,4.67e-07,5;CL:0001029,4.67e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;5.67e-09;42 | |||
|ontology_enrichment_disease=DOID:8692!2.74e-09!31;DOID:1240!1.90e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.76e-14!102;UBERON:0003061!1.76e-14!102;UBERON:0002193!1.02e-12!112;UBERON:0002405!4.64e-12!115;UBERON:0002371!8.07e-11!80;UBERON:0001474!5.82e-10!86;UBERON:0004765!1.55e-07!101;UBERON:0001434!1.55e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-12,76;UBERON:0001474,2.24e-11,82;UBERON:0002405,7.96e-11,93;UBERON:0002390,4.69e-10,98;UBERON:0003061,4.69e-10,98;UBERON:0004765,5.24e-10,90;UBERON:0002193,9.83e-09,108;UBERON:0001434,1.31e-08,100 | |||
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|short_description=p7@MAPKAPK3 | |||
}} |
Revision as of 00:42, 13 September 2013
Short description: | p7@MAPKAPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_MAPKAPK3_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 0bp_to_ENST00000486712_5end |
EntrezGene: | MAPKAPK3 |
HGNC: | 6888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.90e-18 | 108 |
common myeloid progenitor | 2.90e-18 | 108 |
monopoietic cell | 1.97e-15 | 59 |
monocyte | 1.97e-15 | 59 |
monoblast | 1.97e-15 | 59 |
promonocyte | 1.97e-15 | 59 |
granulocyte monocyte progenitor cell | 7.84e-15 | 67 |
macrophage dendritic cell progenitor | 8.41e-15 | 61 |
hematopoietic oligopotent progenitor cell | 1.27e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-13 | 161 |
myeloid leukocyte | 1.31e-13 | 72 |
myeloid lineage restricted progenitor cell | 2.16e-13 | 66 |
defensive cell | 3.88e-13 | 48 |
phagocyte | 3.88e-13 | 48 |
hematopoietic stem cell | 9.01e-13 | 168 |
hematopoietic cell | 8.84e-12 | 177 |
classical monocyte | 3.05e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.05e-11 | 42 |
nongranular leukocyte | 4.40e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.61e-08 | 120 |
leukocyte | 6.35e-08 | 136 |
immature conventional dendritic cell | 4.67e-07 | 5 |
common dendritic progenitor | 4.67e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-12 | 76 |
bone element | 2.24e-11 | 82 |
immune system | 7.96e-11 | 93 |
hematopoietic system | 4.69e-10 | 98 |
blood island | 4.69e-10 | 98 |
skeletal element | 5.24e-10 | 90 |
hemolymphoid system | 9.83e-09 | 108 |
skeletal system | 1.31e-08 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.