FFCP PHASE1:Hg19::chr3:5058332..5058341,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1322|description=CAGE_peak_at_chr3:5058332..5058341,-|id=chr3:5058332..5058341,-|ontology_enrichment_celltype=CL:0000738!1.66e-46!140;CL:0000766!1.07e-40!76;CL:0000037!7.44e-38!172;CL:0000566!7.44e-38!172;CL:0000988!6.73e-35!182;CL:0002057!1.45e-32!42;CL:0002031!1.77e-32!124;CL:0000860!3.23e-32!45;CL:0002032!3.34e-32!165;CL:0000837!3.34e-32!165;CL:0000557!5.98e-32!71;CL:0000839!2.07e-30!70;CL:0002087!4.50e-29!119;CL:0000763!1.60e-28!112;CL:0000049!1.60e-28!112;CL:0002009!9.09e-25!65;CL:0002194!7.71e-24!63;CL:0000576!7.71e-24!63;CL:0000040!7.71e-24!63;CL:0000559!7.71e-24!63;CL:0000134!7.10e-15!358;CL:0002320!2.85e-14!365;CL:0002274!8.22e-13!5;CL:0000457!8.22e-13!5;CL:0002191!8.22e-13!5;CL:0000097!8.22e-13!5;CL:0000831!8.22e-13!5;CL:0002028!8.22e-13!5;CL:0000034!1.36e-12!444;CL:0000219!3.76e-12!390;CL:0000048!4.14e-12!430;CL:0000723!1.05e-11!436;CL:0000094!1.30e-11!8;CL:0000623!7.98e-09!3;CL:0000825!7.98e-09!3;CL:0000767!9.53e-09!3;CL:0000081!3.38e-08!11;CL:0000842!5.89e-08!3;CL:0000784!9.92e-08!3;CL:0000063!1.86e-07!578;CL:0000163!6.65e-07!9|ontology_enrichment_celltype_v019=CL:0000097;8.06e-19;5!CL:0000767;1.79e-14;3!CL:0000623;3.86e-14;3!CL:0000094;4.31e-12;8!CL:0000163;1.03e-10;9!CL:0000081;6.18e-09;11!CL:0000766;3.80e-08;69!CL:0000860;1.94e-07;33!CL:0002057;1.94e-07;33|ontology_enrichment_celltype_v019_2=CL:0000738,4.08e-21,136;CL:0000097,6.74e-19,5;CL:0002028,6.74e-19,5;CL:0000766,5.23e-18,72;CL:0000037,1.24e-16,168;CL:0000988,1.17e-15,177;CL:0002032,2.24e-15,161;CL:0000837,2.24e-15,161;CL:0000623,1.98e-14,3;CL:0000825,1.98e-14,3;CL:0000767,2.26e-14,3;CL:0002031,5.02e-14,120;CL:0000094,4.93e-12,8;CL:0000763,1.87e-11,108;CL:0000049,1.87e-11,108;CL:0000839,6.12e-11,66;CL:0000557,9.23e-11,67;CL:0000163,9.32e-11,9;CL:0002087,1.62e-10,115;CL:0000081,6.80e-09,11;CL:0000860,3.64e-08,42;CL:0002057,3.64e-08,42;CL:0000473,4.34e-07,48;CL:0000234,4.34e-07,48|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.88e-27!80;UBERON:0002390!6.11e-27!102;UBERON:0003061!6.11e-27!102;UBERON:0001474!1.08e-24!86;UBERON:0002193!1.48e-23!112;UBERON:0004765!1.32e-19!101;UBERON:0001434!1.32e-19!101;UBERON:0002405!1.67e-18!115;UBERON:0003081!2.02e-14!216;UBERON:0002384!1.89e-13!375;UBERON:0002204!1.58e-10!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-09,76;UBERON:0002390,1.08e-08,98;UBERON:0003061,1.08e-08,98;UBERON:0001474,1.35e-08,82;UBERON:0002193,9.22e-08,108;UBERON:0004765,9.82e-08,90;UBERON:0002405,1.90e-07,93;UBERON:0001434,7.57e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,1.15148819429164,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0.709446689665756,0.689491361473237,1.29096936716765,4.06279459783025,0.564727018627814,0,0.449446968890169,0.612167784741805,0,2.55734850319616,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,1.95469960234605,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0.764546456250458,1.32171328579026,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,2.90259361757081,1.58531948758658,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.72502059887614,1.92514554419623,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1322 | |||
|description=CAGE_peak_at_chr3:5058332..5058341,- | |||
|id=chr3:5058332..5058341,- | |||
|ontology_enrichment_celltype=CL:0000738!1.66e-46!140;CL:0000766!1.07e-40!76;CL:0000037!7.44e-38!172;CL:0000566!7.44e-38!172;CL:0000988!6.73e-35!182;CL:0002057!1.45e-32!42;CL:0002031!1.77e-32!124;CL:0000860!3.23e-32!45;CL:0002032!3.34e-32!165;CL:0000837!3.34e-32!165;CL:0000557!5.98e-32!71;CL:0000839!2.07e-30!70;CL:0002087!4.50e-29!119;CL:0000763!1.60e-28!112;CL:0000049!1.60e-28!112;CL:0002009!9.09e-25!65;CL:0002194!7.71e-24!63;CL:0000576!7.71e-24!63;CL:0000040!7.71e-24!63;CL:0000559!7.71e-24!63;CL:0000134!7.10e-15!358;CL:0002320!2.85e-14!365;CL:0002274!8.22e-13!5;CL:0000457!8.22e-13!5;CL:0002191!8.22e-13!5;CL:0000097!8.22e-13!5;CL:0000831!8.22e-13!5;CL:0002028!8.22e-13!5;CL:0000034!1.36e-12!444;CL:0000219!3.76e-12!390;CL:0000048!4.14e-12!430;CL:0000723!1.05e-11!436;CL:0000094!1.30e-11!8;CL:0000623!7.98e-09!3;CL:0000825!7.98e-09!3;CL:0000767!9.53e-09!3;CL:0000081!3.38e-08!11;CL:0000842!5.89e-08!3;CL:0000784!9.92e-08!3;CL:0000063!1.86e-07!578;CL:0000163!6.65e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.06e-19;5!CL:0000767;1.79e-14;3!CL:0000623;3.86e-14;3!CL:0000094;4.31e-12;8!CL:0000163;1.03e-10;9!CL:0000081;6.18e-09;11!CL:0000766;3.80e-08;69!CL:0000860;1.94e-07;33!CL:0002057;1.94e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.08e-21,136;CL:0000097,6.74e-19,5;CL:0002028,6.74e-19,5;CL:0000766,5.23e-18,72;CL:0000037,1.24e-16,168;CL:0000988,1.17e-15,177;CL:0002032,2.24e-15,161;CL:0000837,2.24e-15,161;CL:0000623,1.98e-14,3;CL:0000825,1.98e-14,3;CL:0000767,2.26e-14,3;CL:0002031,5.02e-14,120;CL:0000094,4.93e-12,8;CL:0000763,1.87e-11,108;CL:0000049,1.87e-11,108;CL:0000839,6.12e-11,66;CL:0000557,9.23e-11,67;CL:0000163,9.32e-11,9;CL:0002087,1.62e-10,115;CL:0000081,6.80e-09,11;CL:0000860,3.64e-08,42;CL:0002057,3.64e-08,42;CL:0000473,4.34e-07,48;CL:0000234,4.34e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.88e-27!80;UBERON:0002390!6.11e-27!102;UBERON:0003061!6.11e-27!102;UBERON:0001474!1.08e-24!86;UBERON:0002193!1.48e-23!112;UBERON:0004765!1.32e-19!101;UBERON:0001434!1.32e-19!101;UBERON:0002405!1.67e-18!115;UBERON:0003081!2.02e-14!216;UBERON:0002384!1.89e-13!375;UBERON:0002204!1.58e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-09,76;UBERON:0002390,1.08e-08,98;UBERON:0003061,1.08e-08,98;UBERON:0001474,1.35e-08,82;UBERON:0002193,9.22e-08,108;UBERON:0004765,9.82e-08,90;UBERON:0002405,1.90e-07,93;UBERON:0001434,7.57e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50709987588466,1.15148819429164,0.619264493264304,0,0,0,0,0,0,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,0,0.411167888021826,1.54853185447552,0.28769239232215,0.256160706529101,0.709446689665756,0.689491361473237,1.29096936716765,4.06279459783025,0.564727018627814,0,0.449446968890169,0.612167784741805,0,2.55734850319616,0.329851300186716,0,0.426224750532694,0.580418477257168,0,0,0.251248665256743,0,1.95469960234605,0,0.368277635987565,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0.764546456250458,1.32171328579026,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,1.61285394579786,1.33720097891754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,2.90259361757081,1.58531948758658,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,1.72502059887614,1.92514554419623,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:5058332..5058341,- | |||
}} |
Revision as of 00:42, 13 September 2013
Short description: | p@chr3:5058332..5058341, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:5058332..5058341, - |
Coexpression cluster: | C1322_Eosinophils_Basophils_CD14_Mast_Neutrophils_CD34_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.08e-21 | 136 |
mast cell | 6.74e-19 | 5 |
basophil mast progenitor cell | 6.74e-19 | 5 |
myeloid leukocyte | 5.23e-18 | 72 |
hematopoietic stem cell | 1.24e-16 | 168 |
hematopoietic cell | 1.17e-15 | 177 |
hematopoietic oligopotent progenitor cell | 2.24e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-15 | 161 |
natural killer cell | 1.98e-14 | 3 |
pro-NK cell | 1.98e-14 | 3 |
basophil | 2.26e-14 | 3 |
hematopoietic lineage restricted progenitor cell | 5.02e-14 | 120 |
granulocyte | 4.93e-12 | 8 |
myeloid cell | 1.87e-11 | 108 |
common myeloid progenitor | 1.87e-11 | 108 |
myeloid lineage restricted progenitor cell | 6.12e-11 | 66 |
granulocyte monocyte progenitor cell | 9.23e-11 | 67 |
endocrine cell | 9.32e-11 | 9 |
nongranular leukocyte | 1.62e-10 | 115 |
blood cell | 6.80e-09 | 11 |
classical monocyte | 3.64e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.64e-08 | 42 |
defensive cell | 4.34e-07 | 48 |
phagocyte | 4.34e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-09 | 76 |
hematopoietic system | 1.08e-08 | 98 |
blood island | 1.08e-08 | 98 |
bone element | 1.35e-08 | 82 |
hemolymphoid system | 9.22e-08 | 108 |
skeletal element | 9.82e-08 | 90 |
immune system | 1.90e-07 | 93 |
skeletal system | 7.57e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.