FFCP PHASE1:Mm9::chr13:49311347..49311421,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68480|HGNC=|MCL_coexpression_id=2854|UniProt=Q9D1I2,B2RV71|association_with_transcript=0bp_to_ENSMUST00000048946,NM_026738,uc007qiy.1_5end|description=CAGE_peak_1_at_1110007C09Rik_5end|id=chr13:49311347..49311421,-|ontology_enrichment_celltype=CL:0000333!3.10e-07!10;CL:0000095!3.10e-07!10;CL:0000243!3.10e-07!10;CL:0000123!3.10e-07!10;CL:0000125!3.10e-07!10;CL:0000030!3.10e-07!10;CL:0000339!3.10e-07!10;CL:0000144!6.60e-07!121;CL:0000012!6.60e-07!121|ontology_enrichment_celltype_v019_2=CL:0000333,3.10e-07,10;CL:0000095,3.10e-07,10;CL:0000243,3.10e-07,10;CL:0000123,3.10e-07,10;CL:0000125,3.10e-07,10;CL:0000030,3.10e-07,10;CL:0000339,3.10e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.37e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.37e-07,32|phase1_expression=20.3389035823088,36.9913932097723,41.8599300238373,21.1724947914781,27.0483694171027,13.9339795686869,10.5125688267987,12.1375924035082,14.6420271037733,13.3416780003536,1.36974374580404,1.19658238493005,17.2912737230518,20.1066925563694,6.32908547449759,4.04950534779652,2.09868563438444,16.0885704332701,15.4939309974485,13.1560792057389,14.8825757764372,30.28374011627,27.6871776487272,18.5591210440352,21.1056538581796,40.1962374880514,24.5534337810673,17.8841123129288,28.3134894989997,24.9509828462331,25.2772782147047,11.4305521222734,12.3012957516914,15.8481681015439,4.33277429626912,7.48055904113216,6.12508068787107,114.259135191176,160.955080971903,71.7227529244104,174.11652045718,172.810507694487,116.522484727477,41.5459499319405,52.5132503717085,39.6460984669232,92.3221786330686,52.9801130004485,67.4436580994828,59.1066893185822,51.375016736508,48.8758718840903,18.456086666351,23.9369506863744,15.1242209614109,45.0204013062907,48.7106847895886,103.650090547766,7.48570905180512,6.34789175126439,5.70448263155561,86.7442002096978,84.4830056305582,237.573525362289,301.604240582927,284.19204597844,122.236845091509,91.0597383612084,11.509546966241,8.6403800532282,12.8298226424343,42.5619966761667,27.3876990780001,5.75706756310284,3.45043695665651,6.43453150627015,7.70811166995721,13.0241084846891,9.67721159514334,5.01167893374737,6.95306091378313,8.85552729946492,22.6138229191119,11.2552522006336,10.6958773443767,11.7851434189467,14.3795397607094,13.6071595452469,129.264612019745,118.874064047974,13.9134954576805,12.0459342777394,31.2786813505565,7.55584468292944,5.84798775702902,6.2723764193627,17.4151080963372,41.5849987090461,49.8789128837508,68.1945378804957,25.7743458191325,42.3477375467249,10.1922095882658,35.5533351576666,35.9375128078615,32.6834226462877,35.8922355960496,16.2141109201065,13.4647699496529,23.4538579722423,12.1439728736295,17.6589977421042,15.681853813412,16.8809357418937,19.4021366773913,20.9863207520558,28.427421289453,16.33972733195,30.9613693182456,22.1620584427951,18.1090045137523,12.1218813283806,16.775258509631,7.31951992528868,10.6817820474862,25.034791410442,32.9491592391281,45.592607555499,34.3089613097275,6.29120685500255,6.40500843946077,6.91098936620754,4.86708096538374,5.8814555185976,11.0127663616567,10.3834408363365,45.1148381856901,19.4074874151745,18.9542068825256,12.416069497302,6.37590170517248,8.96618207290544,8.64298223065676,6.32960234910003,7.75616090325138,7.17436833595159,7.68354141389776,13.7112786491678,6.46703978798527,7.75334928688059,11.0849208223288,14.4669183402199,13.0682207136031,12.1888258282758,16.2567887762275,7.96137067273973,32.3018066164088,33.455227924913,35.5204374244491,14.2916783049496,11.9608290590359,20.8871991294777,17.0456209621351,19.6764231747404,22.0601971428951,23.2533944750408,23.8763327245661,26.6224980597146,25.8358964364164,18.0584210487005,18.2404821478175,18.1287984407412,13.6121071480451,19.3257243014935,3.36463917702604,6.89460902941206,57.4928682391809,27.7673094996721,9.17139477301506,4.87697010906921,12.1135413642768,12.7060620512706,14.8993289376063,16.5496294717926,31.3189180619378,26.1871338011177,26.138861715228,19.4977342600328,23.2007263671753,21.5716658077013,27.8818084338356,28.2780608021201,9.10405924574792,6.28366819353509,12.3978509240388,9.36796108088446,10.861339281387,15.850695295212,13.4061458703425,18.0084380535115,16.327867695503,18.0159859325829,8.00422093135302,4.67166296005063,5.70021085828289,4.94696647246678,6.08580364165509,8.44120059133459,13.4951701444152,11.2201493605816,11.0251954207024,6.86403532970204,0,11.1642284300551,8.42501717409313,9.34541848404313,9.86685774370517,7.23665282045051,19.0295785871603,9.85355341206521,11.0816183980578,10.6939404038369,5.86725620721255,11.2229192486017,12.6163129669587,25.3673742215138,17.4975009957872,19.0459633097946,21.3669390001033,24.415633892645,21.0675677876393,24.4456909002755,164.362499493807,186.015743865999,15.7364567366092,18.4877620024171,12.0412942490844,16.5268478095006,12.131185957874,11.8661335786055,13.566853434899,10.1514073517126,9.69405289797595,13.860190281248,22.5026660823218,26.6091938941502,9.71545684019746,12.2747460322751,8.30104333687699,1.60660658210904,17.0328102249922,22.0801348547396,27.5278961307544,17.9817434040064,7.96470830039777,10.4395673546642,8.16273603804828,6.03536255218874,12.993283286754,11.0676653259814,22.224833212467,13.0872142611902,12.4774082434652,7.58488219045958,6.32511651449993,4.12542172992747,15.3197822589205,7.38250485528372,12.8065096944927,12.2172109968008,14.1872186913819,14.0911365905636,13.657568709976,21.312546438022,27.6912615515178,20.5477108737906,22.2733682035512,15.6641940294406,23.0894130175145,13.5100951839069,9.19167048824151,6.56563598980245,32.9373345391731,15.7611506708933,14.0114122254239,14.0343070214991,14.6303676622072,7.34636982318295,7.51818252465638,8.00723606222829,71.3909405974192,71.0953377804183,77.5301853042817,55.3708958448766,7.27572785236611,9.96265388921559,13.9326889660124,12.5452977608681,13.538478952263,18.7461441474901,19.8368293740806,24.6050585464988,36.292192521702,19.2615187056947,15.7834022831573,5.53211220362722,9.92750942742586,18.0839605159964,15.8866582877609,22.9780330667458,26.4053786952946,18.6192270326849,11.3248091979768,11.3544536788223,14.977560325409,6.63623353319174,11.7580624868295,9.44940805916411,6.36612032591196,7.34009452236674,7.9472541912506,4.92801343031872,8.4183030489509,5.65412119709627,8.68757595866998,5.24296162711571,5.9449307251249,6.83104075646339,8.99952146798081,16.7780483875256,21.3106515239102,20.7239008767889,18.6351924164127,23.1827512838629,33.7828455812128,17.3994043053902,13.5052078819811,24.0754609936974,6.21227026878773,10.5874804396651,9.16632821503035,8.248952752497,5.48066015816514,0.755393897389701,2.70009000092722,4.95353323546643,4.53142408984205,2.5888015587591,6.43481555021895,11.9707462020309,11.439151585527,11.6691224192781,9.22297915563122,14.5236371675511,13.3348036680969,14.8345241212004,13.4786068028562,13.3929522234813,11.9135270948413,14.1469756039557,13.578018583133,16.1983635584319,16.0819313075717,10.4784612082276,16.803227262004,17.1689206212697,10.3021475200827,13.3951017322302,14.057639347802,12.2458306249943,12.8755542571553,12.9358310802772,12.4224382148236,12.2691181442931,14.2683818840763,13.41655528333,15.4816689784282,9.53941861818155,16.1343624648877,15.6622126977146,19.2338590289754,16.7331788480843,14.4679958235856,14.4890135204009,15.2055545489515,19.3383948643468,26.2065014934315,18.9708620442783,19.9406338633562|short_description=p1@1110007C09Rik}} | ||
|EntrezGene=68480 | |||
|HGNC= | |||
|MCL_coexpression_id=2854 | |||
|UniProt=Q9D1I2,B2RV71 | |||
|association_with_transcript=0bp_to_ENSMUST00000048946,NM_026738,uc007qiy.1_5end | |||
|description=CAGE_peak_1_at_1110007C09Rik_5end | |||
|id=chr13:49311347..49311421,- | |||
|ontology_enrichment_celltype=CL:0000333!3.10e-07!10;CL:0000095!3.10e-07!10;CL:0000243!3.10e-07!10;CL:0000123!3.10e-07!10;CL:0000125!3.10e-07!10;CL:0000030!3.10e-07!10;CL:0000339!3.10e-07!10;CL:0000144!6.60e-07!121;CL:0000012!6.60e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,3.10e-07,10;CL:0000095,3.10e-07,10;CL:0000243,3.10e-07,10;CL:0000123,3.10e-07,10;CL:0000125,3.10e-07,10;CL:0000030,3.10e-07,10;CL:0000339,3.10e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.37e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.37e-07,32 | |||
|phase1_expression=20.3389035823088,36.9913932097723,41.8599300238373,21.1724947914781,27.0483694171027,13.9339795686869,10.5125688267987,12.1375924035082,14.6420271037733,13.3416780003536,1.36974374580404,1.19658238493005,17.2912737230518,20.1066925563694,6.32908547449759,4.04950534779652,2.09868563438444,16.0885704332701,15.4939309974485,13.1560792057389,14.8825757764372,30.28374011627,27.6871776487272,18.5591210440352,21.1056538581796,40.1962374880514,24.5534337810673,17.8841123129288,28.3134894989997,24.9509828462331,25.2772782147047,11.4305521222734,12.3012957516914,15.8481681015439,4.33277429626912,7.48055904113216,6.12508068787107,114.259135191176,160.955080971903,71.7227529244104,174.11652045718,172.810507694487,116.522484727477,41.5459499319405,52.5132503717085,39.6460984669232,92.3221786330686,52.9801130004485,67.4436580994828,59.1066893185822,51.375016736508,48.8758718840903,18.456086666351,23.9369506863744,15.1242209614109,45.0204013062907,48.7106847895886,103.650090547766,7.48570905180512,6.34789175126439,5.70448263155561,86.7442002096978,84.4830056305582,237.573525362289,301.604240582927,284.19204597844,122.236845091509,91.0597383612084,11.509546966241,8.6403800532282,12.8298226424343,42.5619966761667,27.3876990780001,5.75706756310284,3.45043695665651,6.43453150627015,7.70811166995721,13.0241084846891,9.67721159514334,5.01167893374737,6.95306091378313,8.85552729946492,22.6138229191119,11.2552522006336,10.6958773443767,11.7851434189467,14.3795397607094,13.6071595452469,129.264612019745,118.874064047974,13.9134954576805,12.0459342777394,31.2786813505565,7.55584468292944,5.84798775702902,6.2723764193627,17.4151080963372,41.5849987090461,49.8789128837508,68.1945378804957,25.7743458191325,42.3477375467249,10.1922095882658,35.5533351576666,35.9375128078615,32.6834226462877,35.8922355960496,16.2141109201065,13.4647699496529,23.4538579722423,12.1439728736295,17.6589977421042,15.681853813412,16.8809357418937,19.4021366773913,20.9863207520558,28.427421289453,16.33972733195,30.9613693182456,22.1620584427951,18.1090045137523,12.1218813283806,16.775258509631,7.31951992528868,10.6817820474862,25.034791410442,32.9491592391281,45.592607555499,34.3089613097275,6.29120685500255,6.40500843946077,6.91098936620754,4.86708096538374,5.8814555185976,11.0127663616567,10.3834408363365,45.1148381856901,19.4074874151745,18.9542068825256,12.416069497302,6.37590170517248,8.96618207290544,8.64298223065676,6.32960234910003,7.75616090325138,7.17436833595159,7.68354141389776,13.7112786491678,6.46703978798527,7.75334928688059,11.0849208223288,14.4669183402199,13.0682207136031,12.1888258282758,16.2567887762275,7.96137067273973,32.3018066164088,33.455227924913,35.5204374244491,14.2916783049496,11.9608290590359,20.8871991294777,17.0456209621351,19.6764231747404,22.0601971428951,23.2533944750408,23.8763327245661,26.6224980597146,25.8358964364164,18.0584210487005,18.2404821478175,18.1287984407412,13.6121071480451,19.3257243014935,3.36463917702604,6.89460902941206,57.4928682391809,27.7673094996721,9.17139477301506,4.87697010906921,12.1135413642768,12.7060620512706,14.8993289376063,16.5496294717926,31.3189180619378,26.1871338011177,26.138861715228,19.4977342600328,23.2007263671753,21.5716658077013,27.8818084338356,28.2780608021201,9.10405924574792,6.28366819353509,12.3978509240388,9.36796108088446,10.861339281387,15.850695295212,13.4061458703425,18.0084380535115,16.327867695503,18.0159859325829,8.00422093135302,4.67166296005063,5.70021085828289,4.94696647246678,6.08580364165509,8.44120059133459,13.4951701444152,11.2201493605816,11.0251954207024,6.86403532970204,0,11.1642284300551,8.42501717409313,9.34541848404313,9.86685774370517,7.23665282045051,19.0295785871603,9.85355341206521,11.0816183980578,10.6939404038369,5.86725620721255,11.2229192486017,12.6163129669587,25.3673742215138,17.4975009957872,19.0459633097946,21.3669390001033,24.415633892645,21.0675677876393,24.4456909002755,164.362499493807,186.015743865999,15.7364567366092,18.4877620024171,12.0412942490844,16.5268478095006,12.131185957874,11.8661335786055,13.566853434899,10.1514073517126,9.69405289797595,13.860190281248,22.5026660823218,26.6091938941502,9.71545684019746,12.2747460322751,8.30104333687699,1.60660658210904,17.0328102249922,22.0801348547396,27.5278961307544,17.9817434040064,7.96470830039777,10.4395673546642,8.16273603804828,6.03536255218874,12.993283286754,11.0676653259814,22.224833212467,13.0872142611902,12.4774082434652,7.58488219045958,6.32511651449993,4.12542172992747,15.3197822589205,7.38250485528372,12.8065096944927,12.2172109968008,14.1872186913819,14.0911365905636,13.657568709976,21.312546438022,27.6912615515178,20.5477108737906,22.2733682035512,15.6641940294406,23.0894130175145,13.5100951839069,9.19167048824151,6.56563598980245,32.9373345391731,15.7611506708933,14.0114122254239,14.0343070214991,14.6303676622072,7.34636982318295,7.51818252465638,8.00723606222829,71.3909405974192,71.0953377804183,77.5301853042817,55.3708958448766,7.27572785236611,9.96265388921559,13.9326889660124,12.5452977608681,13.538478952263,18.7461441474901,19.8368293740806,24.6050585464988,36.292192521702,19.2615187056947,15.7834022831573,5.53211220362722,9.92750942742586,18.0839605159964,15.8866582877609,22.9780330667458,26.4053786952946,18.6192270326849,11.3248091979768,11.3544536788223,14.977560325409,6.63623353319174,11.7580624868295,9.44940805916411,6.36612032591196,7.34009452236674,7.9472541912506,4.92801343031872,8.4183030489509,5.65412119709627,8.68757595866998,5.24296162711571,5.9449307251249,6.83104075646339,8.99952146798081,16.7780483875256,21.3106515239102,20.7239008767889,18.6351924164127,23.1827512838629,33.7828455812128,17.3994043053902,13.5052078819811,24.0754609936974,6.21227026878773,10.5874804396651,9.16632821503035,8.248952752497,5.48066015816514,0.755393897389701,2.70009000092722,4.95353323546643,4.53142408984205,2.5888015587591,6.43481555021895,11.9707462020309,11.439151585527,11.6691224192781,9.22297915563122,14.5236371675511,13.3348036680969,14.8345241212004,13.4786068028562,13.3929522234813,11.9135270948413,14.1469756039557,13.578018583133,16.1983635584319,16.0819313075717,10.4784612082276,16.803227262004,17.1689206212697,10.3021475200827,13.3951017322302,14.057639347802,12.2458306249943,12.8755542571553,12.9358310802772,12.4224382148236,12.2691181442931,14.2683818840763,13.41655528333,15.4816689784282,9.53941861818155,16.1343624648877,15.6622126977146,19.2338590289754,16.7331788480843,14.4679958235856,14.4890135204009,15.2055545489515,19.3383948643468,26.2065014934315,18.9708620442783,19.9406338633562 | |||
|short_description=p1@1110007C09Rik | |||
}} | |||
Revision as of 00:41, 13 September 2013
| Short description: | p1@1110007C09Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_1110007C09Rik_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2854 |
| Association with transcript: | 0bp_to_ENSMUST00000048946, NM_026738, uc007qiy.1_5end |
| EntrezGene: | 1110007C09Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 3.10e-07 | 10 |
| neuron associated cell | 3.10e-07 | 10 |
| glial cell (sensu Vertebrata) | 3.10e-07 | 10 |
| neuron associated cell (sensu Vertebrata) | 3.10e-07 | 10 |
| glial cell | 3.10e-07 | 10 |
| glioblast | 3.10e-07 | 10 |
| glioblast (sensu Vertebrata) | 3.10e-07 | 10 |
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system | 1.37e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
