FFCP PHASE1:Mm9::chr13:49283614..49283630,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=169|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:49283614..49283630,+|id=chr13:49283614..49283630,+|ontology_enrichment_celltype=CL:0000084!2.10e-22!11;CL:0000827!2.10e-22!11;CL:0000838!2.02e-20!12;CL:0000988!4.36e-20!32;CL:0002032!4.36e-20!32;CL:0000037!4.36e-20!32;CL:0000566!4.36e-20!32;CL:0000837!4.36e-20!32;CL:0002320!1.06e-19!46;CL:0000134!1.06e-19!46;CL:0000542!9.65e-19!13;CL:0000051!9.65e-19!13;CL:0000738!1.87e-17!17;CL:0002087!1.87e-17!17;CL:0000791!4.05e-17!9;CL:0000789!4.05e-17!9;CL:0002420!4.05e-17!9;CL:0002419!4.05e-17!9;CL:0000790!4.05e-17!9;CL:0000219!2.94e-16!54;CL:0000624!3.66e-14!8;CL:0000034!1.10e-12!97;CL:0000063!1.17e-12!66;CL:0002031!2.53e-11!25;CL:0000723!1.89e-09!91;CL:0000048!1.89e-09!91;CL:0000144!2.52e-09!121;CL:0000012!2.52e-09!121;CL:0000893!1.63e-08!6;CL:0002489!1.63e-08!6;CL:0000898!1.63e-08!6;CL:0000809!1.63e-08!6;CL:0000810!1.63e-08!6;CL:0000895!1.63e-08!6;CL:0000808!1.63e-08!6;CL:0000894!1.63e-08!6;CL:0000806!1.63e-08!6;CL:0000807!1.63e-08!6;CL:0000805!1.63e-08!6;CL:0002425!1.63e-08!6;CL:0002436!1.63e-08!6;CL:0002427!1.63e-08!6;CL:0002428!1.63e-08!6;CL:0002429!1.63e-08!6;CL:0002433!1.63e-08!6;CL:0002431!1.63e-08!6;CL:0002432!1.63e-08!6;CL:0000557!8.57e-08!7|ontology_enrichment_celltype_v019_2=CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0000625,4.39e-09,1;CL:0000213,5.27e-09,1;CL:0002078,5.27e-09,1;CL:0000115,5.27e-09,1;CL:0002262,5.27e-09,1;CL:1000398,5.27e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.06e-19!46|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.27e-09,1;UBERON:0001281,5.27e-09,1;UBERON:0000353,5.27e-09,1;UBERON:0003497,5.27e-09,1;UBERON:0003909,5.27e-09,1;UBERON:0003928,5.27e-09,1;UBERON:0003835,5.27e-09,1;UBERON:0003513,5.27e-09,1;UBERON:0001280,5.27e-09,1;UBERON:0004647,5.27e-09,1;UBERON:0002294,5.27e-09,1;UBERON:0001173,5.27e-09,1;UBERON:0004912,5.27e-09,1;UBERON:0005171,5.27e-09,1|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,3.1253413780952,0,9.41170380849623,4.78131839470912,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56954702987096,3.35883485576779,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:49283614..49283630,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:49283614..49283630,+ | |||
|id=chr13:49283614..49283630,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.10e-22!11;CL:0000827!2.10e-22!11;CL:0000838!2.02e-20!12;CL:0000988!4.36e-20!32;CL:0002032!4.36e-20!32;CL:0000037!4.36e-20!32;CL:0000566!4.36e-20!32;CL:0000837!4.36e-20!32;CL:0002320!1.06e-19!46;CL:0000134!1.06e-19!46;CL:0000542!9.65e-19!13;CL:0000051!9.65e-19!13;CL:0000738!1.87e-17!17;CL:0002087!1.87e-17!17;CL:0000791!4.05e-17!9;CL:0000789!4.05e-17!9;CL:0002420!4.05e-17!9;CL:0002419!4.05e-17!9;CL:0000790!4.05e-17!9;CL:0000219!2.94e-16!54;CL:0000624!3.66e-14!8;CL:0000034!1.10e-12!97;CL:0000063!1.17e-12!66;CL:0002031!2.53e-11!25;CL:0000723!1.89e-09!91;CL:0000048!1.89e-09!91;CL:0000144!2.52e-09!121;CL:0000012!2.52e-09!121;CL:0000893!1.63e-08!6;CL:0002489!1.63e-08!6;CL:0000898!1.63e-08!6;CL:0000809!1.63e-08!6;CL:0000810!1.63e-08!6;CL:0000895!1.63e-08!6;CL:0000808!1.63e-08!6;CL:0000894!1.63e-08!6;CL:0000806!1.63e-08!6;CL:0000807!1.63e-08!6;CL:0000805!1.63e-08!6;CL:0002425!1.63e-08!6;CL:0002436!1.63e-08!6;CL:0002427!1.63e-08!6;CL:0002428!1.63e-08!6;CL:0002429!1.63e-08!6;CL:0002433!1.63e-08!6;CL:0002431!1.63e-08!6;CL:0002432!1.63e-08!6;CL:0000557!8.57e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,2.52e-09,1;CL:0000792,2.52e-09,1;CL:0000625,4.39e-09,1;CL:0000213,5.27e-09,1;CL:0002078,5.27e-09,1;CL:0000115,5.27e-09,1;CL:0002262,5.27e-09,1;CL:1000398,5.27e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.06e-19!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,5.27e-09,1;UBERON:0001281,5.27e-09,1;UBERON:0000353,5.27e-09,1;UBERON:0003497,5.27e-09,1;UBERON:0003909,5.27e-09,1;UBERON:0003928,5.27e-09,1;UBERON:0003835,5.27e-09,1;UBERON:0003513,5.27e-09,1;UBERON:0001280,5.27e-09,1;UBERON:0004647,5.27e-09,1;UBERON:0002294,5.27e-09,1;UBERON:0001173,5.27e-09,1;UBERON:0004912,5.27e-09,1;UBERON:0005171,5.27e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,0.140788722151667,0.234064526321993,0,0,0.342401459862411,0.262261207256992,0,0,0,0,0,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,3.1253413780952,0,9.41170380849623,4.78131839470912,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718890747035522,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,0.257347907114715,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56954702987096,3.35883485576779,1.65839968565309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:49283614..49283630,+ | |||
}} |
Revision as of 00:41, 13 September 2013
Short description: | p@chr13:49283614..49283630, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:49283614..49283630, + |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 2.52e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.52e-09 | 1 |
CD8-positive, alpha-beta T cell | 4.39e-09 | 1 |
lining cell | 5.27e-09 | 1 |
meso-epithelial cell | 5.27e-09 | 1 |
endothelial cell | 5.27e-09 | 1 |
endothelial cell of sinusoid | 5.27e-09 | 1 |
endothelial cell of hepatic sinusoid | 5.27e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 5.27e-09 | 1 |
hepatic sinusoid | 5.27e-09 | 1 |
parenchyma | 5.27e-09 | 1 |
abdomen blood vessel | 5.27e-09 | 1 |
sinusoid | 5.27e-09 | 1 |
digestive system duct | 5.27e-09 | 1 |
abdominal segment blood vessel | 5.27e-09 | 1 |
trunk blood vessel | 5.27e-09 | 1 |
liver parenchyma | 5.27e-09 | 1 |
liver lobule | 5.27e-09 | 1 |
biliary system | 5.27e-09 | 1 |
biliary tree | 5.27e-09 | 1 |
biliary bud | 5.27e-09 | 1 |
hepatic duct | 5.27e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.