FFCP PHASE1:Mm9::chr13:41582367..41582400,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:41582367..41582400,-|id=chr13:41582367..41582400,-|ontology_enrichment_celltype=CL:0000988!6.50e-17!32;CL:0002032!6.50e-17!32;CL:0000037!6.50e-17!32;CL:0000566!6.50e-17!32;CL:0000837!6.50e-17!32;CL:0000838!1.03e-15!12;CL:0000084!2.33e-14!11;CL:0000827!2.33e-14!11;CL:0000542!3.17e-14!13;CL:0000051!3.17e-14!13;CL:0000791!8.99e-13!9;CL:0000789!8.99e-13!9;CL:0002420!8.99e-13!9;CL:0002419!8.99e-13!9;CL:0000790!8.99e-13!9;CL:0000624!2.13e-11!8;CL:0002031!2.40e-11!25;CL:0002320!7.68e-11!46;CL:0000134!7.68e-11!46;CL:0000738!4.74e-10!17;CL:0002087!4.74e-10!17;CL:0000893!9.07e-09!6;CL:0002489!9.07e-09!6;CL:0000898!9.07e-09!6;CL:0000809!9.07e-09!6;CL:0000810!9.07e-09!6;CL:0000895!9.07e-09!6;CL:0000808!9.07e-09!6;CL:0000894!9.07e-09!6;CL:0000806!9.07e-09!6;CL:0000807!9.07e-09!6;CL:0000805!9.07e-09!6;CL:0002425!9.07e-09!6;CL:0002436!9.07e-09!6;CL:0002427!9.07e-09!6;CL:0002428!9.07e-09!6;CL:0002429!9.07e-09!6;CL:0002433!9.07e-09!6;CL:0002431!9.07e-09!6;CL:0002432!9.07e-09!6;CL:0000219!3.06e-08!54|ontology_enrichment_celltype_v019_2=CL:0000988,9.63e-30,32;CL:0002032,9.63e-30,32;CL:0000037,9.63e-30,32;CL:0000837,9.63e-30,32;CL:0000791,5.81e-23,9;CL:0000789,5.81e-23,9;CL:0002420,5.81e-23,9;CL:0002419,5.81e-23,9;CL:0000790,5.81e-23,9;CL:0002320,5.73e-22,46;CL:0000134,5.73e-22,46;CL:0000838,1.55e-21,12;CL:0000542,9.13e-20,13;CL:0000051,9.13e-20,13;CL:0000624,9.26e-20,8;CL:0000084,1.41e-18,11;CL:0000827,1.41e-18,11;CL:0000219,3.62e-18,54;CL:0002031,3.75e-17,25;CL:0000034,1.94e-15,97;CL:0000738,9.11e-15,17;CL:0002087,9.11e-15,17;CL:0000893,1.12e-13,6;CL:0002489,1.12e-13,6;CL:0000898,1.12e-13,6;CL:0000809,1.12e-13,6;CL:0000810,1.12e-13,6;CL:0000895,1.12e-13,6;CL:0000808,1.12e-13,6;CL:0000894,1.12e-13,6;CL:0000806,1.12e-13,6;CL:0000807,1.12e-13,6;CL:0000805,1.12e-13,6;CL:0002425,1.12e-13,6;CL:0002436,1.12e-13,6;CL:0002427,1.12e-13,6;CL:0002428,1.12e-13,6;CL:0002429,1.12e-13,6;CL:0002433,1.12e-13,6;CL:0002431,1.12e-13,6;CL:0002432,1.12e-13,6;CL:0000723,1.42e-13,91;CL:0000048,1.42e-13,91;CL:0000049,4.09e-12,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.34e-11,3;DOID:4045,1.34e-11,3|ontology_enrichment_uberon=UBERON:0002193!2.71e-15!48;UBERON:0002390!2.43e-14!45;UBERON:0003061!2.43e-14!45;UBERON:0004177!1.61e-12!29;UBERON:0002384!7.68e-11!46;UBERON:0002370!3.11e-10!23;UBERON:0000974!3.11e-10!23;UBERON:0004807!3.11e-10!23;UBERON:0005058!3.11e-10!23;UBERON:0003351!3.11e-10!23;UBERON:0009113!3.11e-10!23;UBERON:0003295!3.11e-10!23;UBERON:0009722!3.11e-10!23;UBERON:0005562!3.11e-10!23;UBERON:0007690!3.11e-10!23;UBERON:0006562!1.25e-09!24;UBERON:0003408!1.25e-09!24;UBERON:0001557!1.25e-09!24;UBERON:0001042!1.25e-09!24;UBERON:0008814!1.25e-09!24;UBERON:0009145!1.25e-09!24;UBERON:0002405!1.26e-09!70;UBERON:0003081!2.21e-09!88;UBERON:0000072!4.24e-08!27;UBERON:0000065!3.55e-07!41;UBERON:0000063!5.51e-07!35;UBERON:0001004!6.90e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.73e-22,46;UBERON:0002204,5.31e-07,32;UBERON:0002390,9.53e-07,45;UBERON:0003061,9.53e-07,45|phase1_expression=0,0,0,0,0,0,0,4.26106967357202,2.39340827657833,3.5109678948299,1.19852577757853,0.398860794976682,3.59521532855532,2.97229368224591,0,0.607425802169478,0,2.5236973228659,2.4680598049033,2.12194825899015,0.0850432901510698,0.198581902401771,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,60.6870864568516,29.6907430919044,53.9229456293012,178.822372361428,79.2332762551797,77.6816564849846,0,0,0,0,0,0,0,0,0,3.6912173332702,2.90144856804538,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,1.43778149407104,1.79970819298022,2.41433431438823,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,1.42081749697796,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.655453258862952,0,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.619160603889667,0,0,0.546776910884101,0.457556346413045,3.0596117398894,0.979660166265606,1.79659965945751,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0.15241361331,0.201652370273681,0.292373642219257,0.481059208201647,0.584384510907845,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr13:41582367..41582400,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:41582367..41582400,- | |||
|id=chr13:41582367..41582400,- | |||
|ontology_enrichment_celltype=CL:0000988!6.50e-17!32;CL:0002032!6.50e-17!32;CL:0000037!6.50e-17!32;CL:0000566!6.50e-17!32;CL:0000837!6.50e-17!32;CL:0000838!1.03e-15!12;CL:0000084!2.33e-14!11;CL:0000827!2.33e-14!11;CL:0000542!3.17e-14!13;CL:0000051!3.17e-14!13;CL:0000791!8.99e-13!9;CL:0000789!8.99e-13!9;CL:0002420!8.99e-13!9;CL:0002419!8.99e-13!9;CL:0000790!8.99e-13!9;CL:0000624!2.13e-11!8;CL:0002031!2.40e-11!25;CL:0002320!7.68e-11!46;CL:0000134!7.68e-11!46;CL:0000738!4.74e-10!17;CL:0002087!4.74e-10!17;CL:0000893!9.07e-09!6;CL:0002489!9.07e-09!6;CL:0000898!9.07e-09!6;CL:0000809!9.07e-09!6;CL:0000810!9.07e-09!6;CL:0000895!9.07e-09!6;CL:0000808!9.07e-09!6;CL:0000894!9.07e-09!6;CL:0000806!9.07e-09!6;CL:0000807!9.07e-09!6;CL:0000805!9.07e-09!6;CL:0002425!9.07e-09!6;CL:0002436!9.07e-09!6;CL:0002427!9.07e-09!6;CL:0002428!9.07e-09!6;CL:0002429!9.07e-09!6;CL:0002433!9.07e-09!6;CL:0002431!9.07e-09!6;CL:0002432!9.07e-09!6;CL:0000219!3.06e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.63e-30,32;CL:0002032,9.63e-30,32;CL:0000037,9.63e-30,32;CL:0000837,9.63e-30,32;CL:0000791,5.81e-23,9;CL:0000789,5.81e-23,9;CL:0002420,5.81e-23,9;CL:0002419,5.81e-23,9;CL:0000790,5.81e-23,9;CL:0002320,5.73e-22,46;CL:0000134,5.73e-22,46;CL:0000838,1.55e-21,12;CL:0000542,9.13e-20,13;CL:0000051,9.13e-20,13;CL:0000624,9.26e-20,8;CL:0000084,1.41e-18,11;CL:0000827,1.41e-18,11;CL:0000219,3.62e-18,54;CL:0002031,3.75e-17,25;CL:0000034,1.94e-15,97;CL:0000738,9.11e-15,17;CL:0002087,9.11e-15,17;CL:0000893,1.12e-13,6;CL:0002489,1.12e-13,6;CL:0000898,1.12e-13,6;CL:0000809,1.12e-13,6;CL:0000810,1.12e-13,6;CL:0000895,1.12e-13,6;CL:0000808,1.12e-13,6;CL:0000894,1.12e-13,6;CL:0000806,1.12e-13,6;CL:0000807,1.12e-13,6;CL:0000805,1.12e-13,6;CL:0002425,1.12e-13,6;CL:0002436,1.12e-13,6;CL:0002427,1.12e-13,6;CL:0002428,1.12e-13,6;CL:0002429,1.12e-13,6;CL:0002433,1.12e-13,6;CL:0002431,1.12e-13,6;CL:0002432,1.12e-13,6;CL:0000723,1.42e-13,91;CL:0000048,1.42e-13,91;CL:0000049,4.09e-12,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.34e-11,3;DOID:4045,1.34e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.71e-15!48;UBERON:0002390!2.43e-14!45;UBERON:0003061!2.43e-14!45;UBERON:0004177!1.61e-12!29;UBERON:0002384!7.68e-11!46;UBERON:0002370!3.11e-10!23;UBERON:0000974!3.11e-10!23;UBERON:0004807!3.11e-10!23;UBERON:0005058!3.11e-10!23;UBERON:0003351!3.11e-10!23;UBERON:0009113!3.11e-10!23;UBERON:0003295!3.11e-10!23;UBERON:0009722!3.11e-10!23;UBERON:0005562!3.11e-10!23;UBERON:0007690!3.11e-10!23;UBERON:0006562!1.25e-09!24;UBERON:0003408!1.25e-09!24;UBERON:0001557!1.25e-09!24;UBERON:0001042!1.25e-09!24;UBERON:0008814!1.25e-09!24;UBERON:0009145!1.25e-09!24;UBERON:0002405!1.26e-09!70;UBERON:0003081!2.21e-09!88;UBERON:0000072!4.24e-08!27;UBERON:0000065!3.55e-07!41;UBERON:0000063!5.51e-07!35;UBERON:0001004!6.90e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.73e-22,46;UBERON:0002204,5.31e-07,32;UBERON:0002390,9.53e-07,45;UBERON:0003061,9.53e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,4.26106967357202,2.39340827657833,3.5109678948299,1.19852577757853,0.398860794976682,3.59521532855532,2.97229368224591,0,0.607425802169478,0,2.5236973228659,2.4680598049033,2.12194825899015,0.0850432901510698,0.198581902401771,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,60.6870864568516,29.6907430919044,53.9229456293012,178.822372361428,79.2332762551797,77.6816564849846,0,0,0,0,0,0,0,0,0,3.6912173332702,2.90144856804538,5.71359458542189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,1.43778149407104,1.79970819298022,2.41433431438823,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,2.05878325691772,1.42081749697796,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0.195133647857799,0,0,0,0.655453258862952,0,0.433947175744535,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0.619160603889667,0,0,0.546776910884101,0.457556346413045,3.0596117398894,0.979660166265606,1.79659965945751,0,0,0,0,0.209088296014469,0.218362563746178,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0.15241361331,0.201652370273681,0.292373642219257,0.481059208201647,0.584384510907845,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr13:41582367..41582400,- | |||
}} |
Revision as of 00:31, 13 September 2013
Short description: | p@chr13:41582367..41582400, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:41582367..41582400, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.73e-22 | 46 |
musculoskeletal system | 5.31e-07 | 32 |
hematopoietic system | 9.53e-07 | 45 |
blood island | 9.53e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.34e-11 | 3 |
muscle cancer | 1.34e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.