FFCP PHASE1:Mm9::chr13:4058917..4058918,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=859|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:4058917..4058918,+|id=chr13:4058917..4058918,+|ontology_enrichment_celltype=CL:0000222!5.36e-08!7;CL:0000192!5.81e-08!3;CL:0000359!5.81e-08!3;CL:0002539!5.81e-08!3;CL:0000514!5.81e-08!3|ontology_enrichment_celltype_v019_2=CL:0000192,6.12e-34,3;CL:0000359,6.12e-34,3;CL:0002539,6.12e-34,3;CL:0000514,6.12e-34,3;CL:0000680,2.19e-17,6;CL:0000187,2.19e-17,6;CL:0000056,2.19e-17,6;CL:0000222,5.21e-15,7;CL:0000355,7.86e-12,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!5.09e-11!5;UBERON:0001981!5.09e-11!5;UBERON:0002049!5.09e-11!5;UBERON:0007500!5.09e-11!5;UBERON:0007798!5.09e-11!5;UBERON:0004537!5.09e-11!5;UBERON:0006965!5.09e-11!5;UBERON:0000947!2.89e-09!4;UBERON:0001637!2.89e-09!4;UBERON:0003509!2.89e-09!4;UBERON:0004573!2.89e-09!4;UBERON:0004571!2.89e-09!4;UBERON:0010191!2.89e-09!4;UBERON:0004572!2.89e-09!4;UBERON:0001135!5.81e-08!3;UBERON:0004237!5.81e-08!3;UBERON:0004695!5.81e-08!3;UBERON:0002111!5.81e-08!3;UBERON:0004178!5.81e-08!3;UBERON:0003914!5.84e-08!47|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.12e-34,3;UBERON:0004237,6.12e-34,3;UBERON:0004695,6.12e-34,3;UBERON:0002111,6.12e-34,3;UBERON:0004178,6.12e-34,3;UBERON:0000947,1.12e-25,4;UBERON:0001637,1.12e-25,4;UBERON:0004573,1.12e-25,4;UBERON:0003509,1.12e-25,4;UBERON:0004571,1.12e-25,4;UBERON:0010191,1.12e-25,4;UBERON:0004572,1.12e-25,4;UBERON:0000055,1.05e-20,5;UBERON:0007500,1.05e-20,5;UBERON:0001981,1.05e-20,5;UBERON:0002049,1.05e-20,5;UBERON:0007798,1.05e-20,5;UBERON:0004537,1.05e-20,5;UBERON:0006965,1.05e-20,5;UBERON:0001134,7.86e-12,9;UBERON:0002036,7.86e-12,9;UBERON:0002385,7.86e-12,9;UBERON:0000486,7.86e-12,9;UBERON:0007503,7.86e-12,9;UBERON:0001015,7.86e-12,9;UBERON:0002329,7.86e-12,9;UBERON:0003082,7.86e-12,9;UBERON:0003059,7.86e-12,9;UBERON:0007282,7.86e-12,9;UBERON:0004290,7.86e-12,9;UBERON:0009618,7.86e-12,9;UBERON:0000383,1.03e-10,10;UBERON:0007524,8.45e-10,11;UBERON:0003077,8.45e-10,11;UBERON:0007285,8.45e-10,11;UBERON:0005256,6.95e-09,45;UBERON:0003914,1.66e-08,47;UBERON:0000490,4.08e-08,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,3.14268486780495,1.83546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0.896053774194671,0.561777680527007,0.681721290312231,1.55871602761721,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,1.01031551178845,0,2.41221760681684,0.184753190166605,0,0,0,0,0.167506257441816,0,0.780534591431195,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr13:4058917..4058918,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=859 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:4058917..4058918,+ | |||
|id=chr13:4058917..4058918,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.36e-08!7;CL:0000192!5.81e-08!3;CL:0000359!5.81e-08!3;CL:0002539!5.81e-08!3;CL:0000514!5.81e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.12e-34,3;CL:0000359,6.12e-34,3;CL:0002539,6.12e-34,3;CL:0000514,6.12e-34,3;CL:0000680,2.19e-17,6;CL:0000187,2.19e-17,6;CL:0000056,2.19e-17,6;CL:0000222,5.21e-15,7;CL:0000355,7.86e-12,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.09e-11!5;UBERON:0001981!5.09e-11!5;UBERON:0002049!5.09e-11!5;UBERON:0007500!5.09e-11!5;UBERON:0007798!5.09e-11!5;UBERON:0004537!5.09e-11!5;UBERON:0006965!5.09e-11!5;UBERON:0000947!2.89e-09!4;UBERON:0001637!2.89e-09!4;UBERON:0003509!2.89e-09!4;UBERON:0004573!2.89e-09!4;UBERON:0004571!2.89e-09!4;UBERON:0010191!2.89e-09!4;UBERON:0004572!2.89e-09!4;UBERON:0001135!5.81e-08!3;UBERON:0004237!5.81e-08!3;UBERON:0004695!5.81e-08!3;UBERON:0002111!5.81e-08!3;UBERON:0004178!5.81e-08!3;UBERON:0003914!5.84e-08!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,6.12e-34,3;UBERON:0004237,6.12e-34,3;UBERON:0004695,6.12e-34,3;UBERON:0002111,6.12e-34,3;UBERON:0004178,6.12e-34,3;UBERON:0000947,1.12e-25,4;UBERON:0001637,1.12e-25,4;UBERON:0004573,1.12e-25,4;UBERON:0003509,1.12e-25,4;UBERON:0004571,1.12e-25,4;UBERON:0010191,1.12e-25,4;UBERON:0004572,1.12e-25,4;UBERON:0000055,1.05e-20,5;UBERON:0007500,1.05e-20,5;UBERON:0001981,1.05e-20,5;UBERON:0002049,1.05e-20,5;UBERON:0007798,1.05e-20,5;UBERON:0004537,1.05e-20,5;UBERON:0006965,1.05e-20,5;UBERON:0001134,7.86e-12,9;UBERON:0002036,7.86e-12,9;UBERON:0002385,7.86e-12,9;UBERON:0000486,7.86e-12,9;UBERON:0007503,7.86e-12,9;UBERON:0001015,7.86e-12,9;UBERON:0002329,7.86e-12,9;UBERON:0003082,7.86e-12,9;UBERON:0003059,7.86e-12,9;UBERON:0007282,7.86e-12,9;UBERON:0004290,7.86e-12,9;UBERON:0009618,7.86e-12,9;UBERON:0000383,1.03e-10,10;UBERON:0007524,8.45e-10,11;UBERON:0003077,8.45e-10,11;UBERON:0007285,8.45e-10,11;UBERON:0005256,6.95e-09,45;UBERON:0003914,1.66e-08,47;UBERON:0000490,4.08e-08,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,3.14268486780495,1.83546752161682,0,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,1.29955283489534,0.896053774194671,0.561777680527007,0.681721290312231,1.55871602761721,0,0,1.28326477414318,0,0,0,0,0,0,0,0,0,0,0,0,0.352766121407114,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,1.01031551178845,0,2.41221760681684,0.184753190166605,0,0,0,0,0.167506257441816,0,0.780534591431195,0,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr13:4058917..4058918,+ | |||
}} |
Revision as of 00:29, 13 September 2013
Short description: | p@chr13:4058917..4058918, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:4058917..4058918, + |
Coexpression cluster: | MCL_coexpression_mm9:859 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.12e-34 | 3 |
vascular associated smooth muscle cell | 6.12e-34 | 3 |
aortic smooth muscle cell | 6.12e-34 | 3 |
smooth muscle myoblast | 6.12e-34 | 3 |
muscle precursor cell | 2.19e-17 | 6 |
muscle cell | 2.19e-17 | 6 |
myoblast | 2.19e-17 | 6 |
mesodermal cell | 5.21e-15 | 7 |
multi-potent skeletal muscle stem cell | 7.86e-12 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.