FFCP PHASE1:Mm9::chr13:115892099..115892115,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=109700|HGNC=|MCL_coexpression_id=2055|UniProt=Q3URV2|association_with_transcript=23bp_to_ENSMUST00000036276_5end|description=CAGE_peak_7_at_Itga1_5end|id=chr13:115892099..115892115,-|ontology_enrichment_celltype=CL:0000107!4.57e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.07e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!2.48e-08!33;UBERON:0002048!1.14e-07!14;UBERON:0000117!1.14e-07!14;UBERON:0000171!1.14e-07!14;UBERON:0000170!1.14e-07!14;UBERON:0005597!1.14e-07!14;UBERON:0000118!1.14e-07!14;UBERON:0004535!1.61e-07!23;UBERON:0001009!1.61e-07!23;UBERON:0007100!2.31e-07!18;UBERON:0000948!2.31e-07!18;UBERON:0005498!2.31e-07!18;UBERON:0004140!2.31e-07!18;UBERON:0009881!2.31e-07!18;UBERON:0004141!2.31e-07!18;UBERON:0003084!2.31e-07!18;UBERON:0007005!2.31e-07!18;UBERON:0004139!2.31e-07!18;UBERON:0004291!2.31e-07!18;UBERON:0002410!4.57e-07!9;UBERON:0005153!7.47e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.05e-10,23;UBERON:0001009,3.05e-10,23;UBERON:0002410,1.07e-09,9;UBERON:0005157,1.80e-09,20;UBERON:0007100,2.40e-09,18;UBERON:0000948,2.40e-09,18;UBERON:0005498,2.40e-09,18;UBERON:0004140,2.40e-09,18;UBERON:0009881,2.40e-09,18;UBERON:0004141,2.40e-09,18;UBERON:0003084,2.40e-09,18;UBERON:0007005,2.40e-09,18;UBERON:0004139,2.40e-09,18;UBERON:0004291,2.40e-09,18;UBERON:0002048,2.41e-09,14;UBERON:0000117,2.41e-09,14;UBERON:0000171,2.41e-09,14;UBERON:0000170,2.41e-09,14;UBERON:0005597,2.41e-09,14;UBERON:0000118,2.41e-09,14;UBERON:0004872,5.79e-09,33;UBERON:0003103,6.68e-08,43;UBERON:0000010,2.41e-07,11;UBERON:0005153,6.16e-07,17;UBERON:0005178,6.16e-07,17;UBERON:0005181,6.16e-07,17;UBERON:0002224,6.16e-07,17;UBERON:0000915,6.16e-07,17;UBERON:0008947,6.16e-07,17;UBERON:0003258,6.16e-07,17|phase1_expression=1.12104192973356,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0,0,0.935476191661768,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0,1.00717454380462,1.11514624341466,0,0,0.218025156380447,0.439372365468944,1.55543919259427,0.419959264876088,0,0,0,0,0.771778308107841,0.85960031981627,0,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0.518448061542388,0,0.210324961351382,0.285650984403804,0,0.61245399607477,0.0958454710182364,0,0,0.766124028511126,0.46081959976873,0.527545150920775,0.182975287204819,0,0,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0.372798891650601,0,0.302286240427142,5.50742528533188,1.72084775396277,0,0.539703191637817,0,0,0.702222100658759,1.02258193546835,1.29893002301434,0.70667914902068,0,2.56652954828636,2.54805239706646,0,0,0,0,0.34255163915718,2.33044095282455,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0.940709657085638,0.628332956648377,0,1.59059292611903,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0.585561594023094,0.41889341362691,1.02182822083437,0.838705871541442,1.19980546198682,0.254140454146129,0.149790639404823,0.915001205637253,0.125654352112864,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0.611036183101898,0.373220911830279,0.505445516867349,0.841767423545896,0,0,0.900310649026746,0.753524089178575,0.340182495756639,0.12811372028485,0.374806898238915,0.517406741478031,0,0.378212160335639,0.527853372491847,0.219195732427575,1.39023624612799,0.696504333044333,1.64625709126355,0.796137067273973,4.21327912387941,1.54408744268829,0.852490498186778,2.48550927042602,3.04883877975425,1.62055855314913,3.07768156260773,3.14822770795846,4.01094493507183,4.18561100550734,2.95100741539581,2.33530684734339,2.30383789878873,2.13417703302824,2.35099547682982,2.77779976108131,5.26920276698522,4.83143107537338,0.210289948564127,0.308713837137853,4.29544417878937,0.793351699990633,0.853153002140936,0.696710015581316,0.77320476793256,1.21010114774006,1.33426826306922,0.951128130562796,0.474529061544512,0.823494773620054,1.25667604400135,0.795825888164603,1.16978452271472,0,0.864552199498777,0.597423819763102,0.758671603812327,0.685491075658373,2.25415471346161,2.24016460629846,3.68509725618489,1.96380295692892,4.11037491307672,2.06654207171443,2.66897837330337,2.09775178667061,0.592905254174298,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.549122826376163,0,1.48856379067401,0.936113019343682,0.505157755894224,0.717589654087649,1.92977408545347,4.24932337383191,0.37898282354097,0.977789858652155,1.86719594352707,3.05097322775053,2.84760637651087,5.47500374037832,1.95133647857799,5.51723004371669,7.30833475840957,7.17546458958692,5.73521601505083,6.734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| ||
|EntrezGene=109700 | |||
|HGNC= | |||
|MCL_coexpression_id=2055 | |||
|UniProt=Q3URV2 | |||
|association_with_transcript=23bp_to_ENSMUST00000036276_5end | |||
|description=CAGE_peak_7_at_Itga1_5end | |||
|id=chr13:115892099..115892115,- | |||
|ontology_enrichment_celltype=CL:0000107!4.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.07e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.48e-08!33;UBERON:0002048!1.14e-07!14;UBERON:0000117!1.14e-07!14;UBERON:0000171!1.14e-07!14;UBERON:0000170!1.14e-07!14;UBERON:0005597!1.14e-07!14;UBERON:0000118!1.14e-07!14;UBERON:0004535!1.61e-07!23;UBERON:0001009!1.61e-07!23;UBERON:0007100!2.31e-07!18;UBERON:0000948!2.31e-07!18;UBERON:0005498!2.31e-07!18;UBERON:0004140!2.31e-07!18;UBERON:0009881!2.31e-07!18;UBERON:0004141!2.31e-07!18;UBERON:0003084!2.31e-07!18;UBERON:0007005!2.31e-07!18;UBERON:0004139!2.31e-07!18;UBERON:0004291!2.31e-07!18;UBERON:0002410!4.57e-07!9;UBERON:0005153!7.47e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.05e-10,23;UBERON:0001009,3.05e-10,23;UBERON:0002410,1.07e-09,9;UBERON:0005157,1.80e-09,20;UBERON:0007100,2.40e-09,18;UBERON:0000948,2.40e-09,18;UBERON:0005498,2.40e-09,18;UBERON:0004140,2.40e-09,18;UBERON:0009881,2.40e-09,18;UBERON:0004141,2.40e-09,18;UBERON:0003084,2.40e-09,18;UBERON:0007005,2.40e-09,18;UBERON:0004139,2.40e-09,18;UBERON:0004291,2.40e-09,18;UBERON:0002048,2.41e-09,14;UBERON:0000117,2.41e-09,14;UBERON:0000171,2.41e-09,14;UBERON:0000170,2.41e-09,14;UBERON:0005597,2.41e-09,14;UBERON:0000118,2.41e-09,14;UBERON:0004872,5.79e-09,33;UBERON:0003103,6.68e-08,43;UBERON:0000010,2.41e-07,11;UBERON:0005153,6.16e-07,17;UBERON:0005178,6.16e-07,17;UBERON:0005181,6.16e-07,17;UBERON:0002224,6.16e-07,17;UBERON:0000915,6.16e-07,17;UBERON:0008947,6.16e-07,17;UBERON:0003258,6.16e-07,17 | |||
|phase1_expression=1.12104192973356,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0,0,0.935476191661768,0.0992909512008853,0,0.159992422793407,0.22940928106717,0.57423196411502,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0.7813353445238,1.57057123192139,0,0,0,1.00717454380462,1.11514624341466,0,0,0.218025156380447,0.439372365468944,1.55543919259427,0.419959264876088,0,0,0,0,0.771778308107841,0.85960031981627,0,0.202316460859598,1.05798195854407,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0.518448061542388,0,0.210324961351382,0.285650984403804,0,0.61245399607477,0.0958454710182364,0,0,0.766124028511126,0.46081959976873,0.527545150920775,0.182975287204819,0,0,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0.372798891650601,0,0.302286240427142,5.50742528533188,1.72084775396277,0,0.539703191637817,0,0,0.702222100658759,1.02258193546835,1.29893002301434,0.70667914902068,0,2.56652954828636,2.54805239706646,0,0,0,0,0.34255163915718,2.33044095282455,0.890652834388949,0.173485326766136,0.304465478312141,0.230615497256059,0.60289056221049,0.940709657085638,0.628332956648377,0,1.59059292611903,0,0.323533699894818,0.662524555381181,0.484875253135222,0,0.585561594023094,0.41889341362691,1.02182822083437,0.838705871541442,1.19980546198682,0.254140454146129,0.149790639404823,0.915001205637253,0.125654352112864,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0.611036183101898,0.373220911830279,0.505445516867349,0.841767423545896,0,0,0.900310649026746,0.753524089178575,0.340182495756639,0.12811372028485,0.374806898238915,0.517406741478031,0,0.378212160335639,0.527853372491847,0.219195732427575,1.39023624612799,0.696504333044333,1.64625709126355,0.796137067273973,4.21327912387941,1.54408744268829,0.852490498186778,2.48550927042602,3.04883877975425,1.62055855314913,3.07768156260773,3.14822770795846,4.01094493507183,4.18561100550734,2.95100741539581,2.33530684734339,2.30383789878873,2.13417703302824,2.35099547682982,2.77779976108131,5.26920276698522,4.83143107537338,0.210289948564127,0.308713837137853,4.29544417878937,0.793351699990633,0.853153002140936,0.696710015581316,0.77320476793256,1.21010114774006,1.33426826306922,0.951128130562796,0.474529061544512,0.823494773620054,1.25667604400135,0.795825888164603,1.16978452271472,0,0.864552199498777,0.597423819763102,0.758671603812327,0.685491075658373,2.25415471346161,2.24016460629846,3.68509725618489,1.96380295692892,4.11037491307672,2.06654207171443,2.66897837330337,2.09775178667061,0.592905254174298,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.549122826376163,0,1.48856379067401,0.936113019343682,0.505157755894224,0.717589654087649,1.92977408545347,4.24932337383191,0.37898282354097,0.977789858652155,1.86719594352707,3.05097322775053,2.84760637651087,5.47500374037832,1.95133647857799,5.51723004371669,7.30833475840957,7.17546458958692,5.73521601505083,6.73471429276993,7.95569822198314,0,0.54390568381871,0.983528546038072,0.551873492609465,0.160550589987792,0.703270119553219,0.163934945376675,1.51482556322624,7.88770548540642,4.68526493155966,10.5557464889071,4.54040716109849,2.89638276307112,5.66153061577665,4.04810701674894,4.9683495844923,7.11518000303742,0.321321316421807,1.27746076687442,1.06839362200353,0.488660878060728,0.494910368917606,0,0.485561272309963,0,0.188605079755898,1.18120757152309,0.922305443831782,0.516856586336442,1.09060118843252,1.78248689192361,1.58018378967908,1.05418608574999,2.06271086496374,0,0.18006109403131,0.388076051348264,0.214337035031592,0.886701168211368,0.356737635204141,0.329098041204242,0,2.58138878870081,0.847328283455281,0.441056796109924,0.16488625294148,0.807322133479528,0.784068024066026,1.67121281604391,0.492422699235184,0,0.556275906031529,0.854354403989263,2.47664241555867,3.88908507476395,1.31857919903284,0.683471138605126,0.686334519619568,0,0,0,0,0.316335993581135,1.21991680276109,1.29606408986162,2.09088296014469,0.87345025498471,1.21377911746339,1.57041565878138,1.57053565190418,0.90730481304255,0.621339313086926,0,0.897099276263873,0.496375471371293,0.972255941720238,0.387479470433193,0.337912250981556,0.469428954583016,0.911430693907651,0.734015410979976,0.483168241652012,0.864090018773596,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.201932899896295,0,0.201652370273681,0.292373642219257,0.384847366561318,0,1.13365191807606,0,0.0897138566094757,0,1.73870634628971,5.06742683718191,1.09890974560359,0.428736758158132,2.50786052017682,0.564751842617067,0.920650473014354,1.14579102687879,0.343706364687375,0,0,0,0,0,0,0,0,1.19513524027894,1.21553358534147,0.419226325255965,0.183843508450014,0.888986911206461,1.23621034343337,0.64183841918363,1.010788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| |||
|short_description=p7@Itga1 | |||
}} |
Revision as of 23:56, 12 September 2013
Short description: | p7@Itga1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Itga1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2055 |
Association with transcript: | 23bp_to_ENSMUST00000036276_5end |
EntrezGene: | Itga1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.07e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.05e-10 | 23 |
circulatory system | 3.05e-10 | 23 |
autonomic nervous system | 1.07e-09 | 9 |
epithelial fold | 1.80e-09 | 20 |
primary circulatory organ | 2.40e-09 | 18 |
heart | 2.40e-09 | 18 |
primitive heart tube | 2.40e-09 | 18 |
primary heart field | 2.40e-09 | 18 |
anterior lateral plate mesoderm | 2.40e-09 | 18 |
heart tube | 2.40e-09 | 18 |
heart primordium | 2.40e-09 | 18 |
cardiac mesoderm | 2.40e-09 | 18 |
cardiogenic plate | 2.40e-09 | 18 |
heart rudiment | 2.40e-09 | 18 |
lung | 2.41e-09 | 14 |
respiratory tube | 2.41e-09 | 14 |
respiration organ | 2.41e-09 | 14 |
pair of lungs | 2.41e-09 | 14 |
lung primordium | 2.41e-09 | 14 |
lung bud | 2.41e-09 | 14 |
splanchnic layer of lateral plate mesoderm | 5.79e-09 | 33 |
compound organ | 6.68e-08 | 43 |
peripheral nervous system | 2.41e-07 | 11 |
epithelial bud | 6.16e-07 | 17 |
thoracic cavity element | 6.16e-07 | 17 |
thoracic segment organ | 6.16e-07 | 17 |
thoracic cavity | 6.16e-07 | 17 |
thoracic segment of trunk | 6.16e-07 | 17 |
respiratory primordium | 6.16e-07 | 17 |
endoderm of foregut | 6.16e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.