FFCP PHASE1:Mm9::chr13:115629493..115629504,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:115629493..115629504,+|id=chr13:115629493..115629504,+|ontology_enrichment_celltype=CL:0000107!1.49e-12!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.82e-52,9;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000540,2.56e-14,33;CL:0000047,2.56e-14,33;CL:0000031,2.56e-14,33;CL:0000404,2.56e-14,33;CL:0002319,3.21e-14,43;CL:0000393,4.27e-12,39;CL:0000211,4.27e-12,39;CL:0000710,1.83e-11,1;CL:0002077,1.83e-11,1;CL:0005014,1.83e-11,1;CL:0002315,1.83e-11,1;CL:0002490,1.83e-11,1;CL:0002321,4.95e-11,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.77e-15!11;UBERON:0002410!1.49e-12!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,8.86e-56,11;UBERON:0002410,1.82e-52,9;UBERON:0000011,3.62e-30,3;UBERON:0000013,2.19e-29,3;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0001016,4.95e-08,75|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0.37863096666592,1.20914496170857,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,2.15423397732799,2.38968797952552,2.45078541490634,2.26461224631066,2.42886421004937,1.75353514746787,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0|short_description=p@chr13:115629493..115629504,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:115629493..115629504,+ | |||
|id=chr13:115629493..115629504,+ | |||
|ontology_enrichment_celltype=CL:0000107!1.49e-12!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.82e-52,9;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000540,2.56e-14,33;CL:0000047,2.56e-14,33;CL:0000031,2.56e-14,33;CL:0000404,2.56e-14,33;CL:0002319,3.21e-14,43;CL:0000393,4.27e-12,39;CL:0000211,4.27e-12,39;CL:0000710,1.83e-11,1;CL:0002077,1.83e-11,1;CL:0005014,1.83e-11,1;CL:0002315,1.83e-11,1;CL:0002490,1.83e-11,1;CL:0002321,4.95e-11,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.77e-15!11;UBERON:0002410!1.49e-12!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,8.86e-56,11;UBERON:0002410,1.82e-52,9;UBERON:0000011,3.62e-30,3;UBERON:0000013,2.19e-29,3;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0001016,4.95e-08,75 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.284743361598206,0.186399445825301,0.37863096666592,1.20914496170857,0,0,0,0,0,0,0,0,0,0,2.81686839553361,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.30140963567143,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0.232236671860439,0,0,0,0,0,0,0.502670417600539,0.198956472041151,0,0,0.216138049874694,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0,2.15423397732799,2.38968797952552,2.45078541490634,2.26461224631066,2.42886421004937,1.75353514746787,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.493647061806363,0,0,0,0,0,0.322928853391811,0.120625849856312,0,0.164140899745061,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.495920734352016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0,0,0,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0.25384382367503,0,0,0.271608227691724,0,0.118635018124174,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr13:115629493..115629504,+ | |||
}} |
Revision as of 23:56, 12 September 2013
Short description: | p@chr13:115629493..115629504, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:115629493..115629504, + |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.82e-52 | 9 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
neuron | 2.56e-14 | 33 |
neuronal stem cell | 2.56e-14 | 33 |
neuroblast | 2.56e-14 | 33 |
electrically signaling cell | 2.56e-14 | 33 |
neural cell | 3.21e-14 | 43 |
electrically responsive cell | 4.27e-12 | 39 |
electrically active cell | 4.27e-12 | 39 |
neurecto-epithelial cell | 1.83e-11 | 1 |
ecto-epithelial cell | 1.83e-11 | 1 |
auditory epithelial support cell | 1.83e-11 | 1 |
supporting cell of cochlea | 1.83e-11 | 1 |
organ of Corti supporting cell | 1.83e-11 | 1 |
embryonic cell | 4.95e-11 | 70 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 8.86e-56 | 11 |
autonomic nervous system | 1.82e-52 | 9 |
parasympathetic nervous system | 3.62e-30 | 3 |
sympathetic nervous system | 2.19e-29 | 3 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
nervous system | 4.95e-08 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.