FFCP PHASE1:Hg19::chr3:19988649..19988692,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9783 | |||
|TSSclassifier=S | |||
|UniProt=C9J3X8 | |||
|association_with_transcript=-49bp_to_ENST00000443878_5end | |||
|description=CAGE_peak_3_at_RAB5A_5end | |||
|id=chr3:19988649..19988692,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;1.77e-10;41!UBERON:0001890;1.77e-10;41!UBERON:0001893;5.65e-10;34!UBERON:0003528;9.90e-10;34!UBERON:0002020;9.90e-10;34!UBERON:0000073;2.02e-09;53!UBERON:0002616;2.02e-09;53!UBERON:0001869;2.27e-09;32!UBERON:0002791;2.77e-09;32!UBERON:0002619;4.34e-09;22!UBERON:0007023;1.05e-08;114!UBERON:0000956;4.30e-08;25!UBERON:0000203;4.30e-08;25!UBERON:0001950;4.56e-08;20 | |||
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| |||
|short_description=p3@RAB5A | |||
}} |
Revision as of 23:38, 12 September 2013
Short description: | p3@RAB5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RAB5A_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000443878_5end |
EntrezGene: | RAB5A |
HGNC: | 9783 |
UniProt: | C9J3X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.47e-30 | 114 |
neural tube | 6.42e-17 | 56 |
neural rod | 6.42e-17 | 56 |
future spinal cord | 6.42e-17 | 56 |
neural keel | 6.42e-17 | 56 |
regional part of nervous system | 2.29e-15 | 53 |
regional part of brain | 2.29e-15 | 53 |
regional part of forebrain | 3.19e-14 | 41 |
forebrain | 3.19e-14 | 41 |
anterior neural tube | 3.19e-14 | 41 |
future forebrain | 3.19e-14 | 41 |
nervous system | 8.16e-13 | 89 |
central nervous system | 1.33e-12 | 81 |
neural plate | 1.50e-11 | 82 |
presumptive neural plate | 1.50e-11 | 82 |
brain grey matter | 1.79e-11 | 34 |
gray matter | 1.79e-11 | 34 |
telencephalon | 3.73e-11 | 34 |
brain | 1.36e-10 | 68 |
future brain | 1.36e-10 | 68 |
cerebral hemisphere | 2.06e-10 | 32 |
regional part of telencephalon | 2.55e-10 | 32 |
neurectoderm | 7.37e-10 | 86 |
regional part of cerebral cortex | 4.67e-09 | 22 |
pre-chordal neural plate | 5.73e-09 | 61 |
structure with developmental contribution from neural crest | 8.44e-09 | 132 |
organ system subdivision | 1.33e-08 | 223 |
cerebral cortex | 4.34e-08 | 25 |
pallium | 4.34e-08 | 25 |
neocortex | 4.72e-08 | 20 |
ecto-epithelium | 7.13e-08 | 104 |
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