FFCP PHASE1:Mm9::chr12:91050881..91050905,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18191|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=0bp_to_NM_001252074_5end|description=CAGE_peak_2_at_Nrxn3_5end|id=chr12:91050881..91050905,+|ontology_enrichment_celltype=CL:0000540!3.32e-12!33;CL:0000047!3.32e-12!33;CL:0000031!3.32e-12!33;CL:0000404!3.32e-12!33;CL:0000117!1.45e-09!23;CL:0000337!1.45e-09!23;CL:0000221!8.66e-09!44;CL:0000133!8.66e-09!44;CL:0002319!1.28e-08!43;CL:0000393!4.78e-08!39;CL:0000211!4.78e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,3.09e-14,33;CL:0000047,3.09e-14,33;CL:0000031,3.09e-14,33;CL:0000404,3.09e-14,33;CL:0000117,1.35e-11,23;CL:0000337,1.35e-11,23;CL:0000393,2.48e-10,39;CL:0000211,2.48e-10,39;CL:0000221,1.30e-08,44;CL:0000133,1.30e-08,44;CL:0002319,2.07e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.45e-26!73;UBERON:0005743!4.45e-26!73;UBERON:0000073!1.09e-25!75;UBERON:0001016!1.09e-25!75;UBERON:0004121!1.96e-24!102;UBERON:0000924!1.96e-24!102;UBERON:0006601!1.96e-24!102;UBERON:0002346!1.33e-21!71;UBERON:0003075!1.33e-21!71;UBERON:0007284!1.33e-21!71;UBERON:0000033!1.48e-21!63;UBERON:0001049!6.58e-21!52;UBERON:0005068!6.58e-21!52;UBERON:0006241!6.58e-21!52;UBERON:0007135!6.58e-21!52;UBERON:0000955!8.47e-20!50;UBERON:0006238!8.47e-20!50;UBERON:0002616!4.37e-19!49;UBERON:0003056!1.17e-16!49;UBERON:0003080!5.07e-15!40;UBERON:0002780!2.25e-14!39;UBERON:0001890!2.25e-14!39;UBERON:0006240!2.25e-14!39;UBERON:0002020!4.92e-14!34;UBERON:0000153!1.78e-11!94;UBERON:0002791!6.39e-11!29;UBERON:0003528!6.39e-11!29;UBERON:0001893!6.39e-11!29;UBERON:0007811!8.91e-11!86;UBERON:0002619!3.60e-08!17;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.85e-29,73;UBERON:0001016,8.26e-28,75;UBERON:0002346,1.26e-25,64;UBERON:0003075,1.26e-25,64;UBERON:0007284,1.26e-25,64;UBERON:0000073,5.61e-25,54;UBERON:0004121,4.14e-24,95;UBERON:0000924,4.14e-24,95;UBERON:0006601,4.14e-24,95;UBERON:0001049,4.46e-23,52;UBERON:0005068,4.46e-23,52;UBERON:0006241,4.46e-23,52;UBERON:0007135,4.46e-23,52;UBERON:0010371,3.39e-22,73;UBERON:0000955,4.50e-19,47;UBERON:0006238,4.50e-19,47;UBERON:0002616,2.98e-18,46;UBERON:0003056,3.76e-17,49;UBERON:0003080,1.94e-16,40;UBERON:0002020,7.49e-16,34;UBERON:0002780,1.15e-15,39;UBERON:0001890,1.15e-15,39;UBERON:0006240,1.15e-15,39;UBERON:0010314,9.11e-14,92;UBERON:0003528,4.25e-12,29;UBERON:0002791,4.25e-12,29;UBERON:0001893,4.25e-12,29;UBERON:0002021,6.86e-09,10;UBERON:0000411,6.86e-09,10;UBERON:0001950,6.86e-09,10;UBERON:0002619,1.85e-08,17;UBERON:0003076,2.46e-07,12;UBERON:0003057,2.46e-07,12;UBERON:0000956,4.45e-07,21;UBERON:0001869,4.45e-07,21;UBERON:0000203,4.45e-07,21;UBERON:0002420,7.45e-07,8;UBERON:0007245,7.45e-07,8;UBERON:0010009,7.45e-07,8;UBERON:0010011,7.45e-07,8;UBERON:0000454,7.45e-07,8|phase1_expression=3.36312578920067,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,22.9616883407888,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,28.1219880594841,27.5075309221457,31.691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0,39.4198358477249,38.2102575846291,5.75706756310284,2.97120960156533,3.67687514644008,128.835580769285,99.0853743541057,90.0134284881587,19.3872842963385,23.0548861878072,23.962015045611,57.7908807932859,25.3243174514256,38.1995619442025,90.450975740416,75.8841058659219,39.3302830691384,0.151452386666368,0.68014404096107,0,0,0,0,0,0,2.94933282276679,0,0,0,2.81686839553361,0,0,0,0,0,0,2.74041311325744,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,463.179220872268,386.429174070825,0,0,0,0,55.4225365797844,55.8150735438724,18.4711897605911,70.9203226384488,43.7273432034865,79.7906091108711,71.8728795390166,0.81471491080253,0,0,3.99839526184301,1.17108398666433,0.919608417733892,0.720248519221397,2.26057226753573,3.26575195926374,5.25266253167884,5.05989312622536,8.2785078636485,1.29340795759705,0.945530400839096,3.16712023495108,4.82230611340665,3.61461423993277,0.696504333044333,1.85203922767149,2.9855140022774,0,0,0,2.48550927042602,1.40715635988658,0.180062061461015,0.946978942340841,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0,0,0,0,0,13.0379768109759,4.6307075570678,0,0,3.62590025909898,1.85789337488351,1.03093969057675,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0.397912944082302,0,1.79763881730844,0,0,2.65535061334314,1.71372768914593,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.379419222745544,0,0,0,0,0.333690211432188,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27389694124582,1.14075483509418,0.678980343100753,1.17345124144251,0.167506257441816,0.238043640886014,0,0.157635144106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| ||
|EntrezGene=18191 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NM_001252074_5end | |||
|description=CAGE_peak_2_at_Nrxn3_5end | |||
|id=chr12:91050881..91050905,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.32e-12!33;CL:0000047!3.32e-12!33;CL:0000031!3.32e-12!33;CL:0000404!3.32e-12!33;CL:0000117!1.45e-09!23;CL:0000337!1.45e-09!23;CL:0000221!8.66e-09!44;CL:0000133!8.66e-09!44;CL:0002319!1.28e-08!43;CL:0000393!4.78e-08!39;CL:0000211!4.78e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,3.09e-14,33;CL:0000047,3.09e-14,33;CL:0000031,3.09e-14,33;CL:0000404,3.09e-14,33;CL:0000117,1.35e-11,23;CL:0000337,1.35e-11,23;CL:0000393,2.48e-10,39;CL:0000211,2.48e-10,39;CL:0000221,1.30e-08,44;CL:0000133,1.30e-08,44;CL:0002319,2.07e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.45e-26!73;UBERON:0005743!4.45e-26!73;UBERON:0000073!1.09e-25!75;UBERON:0001016!1.09e-25!75;UBERON:0004121!1.96e-24!102;UBERON:0000924!1.96e-24!102;UBERON:0006601!1.96e-24!102;UBERON:0002346!1.33e-21!71;UBERON:0003075!1.33e-21!71;UBERON:0007284!1.33e-21!71;UBERON:0000033!1.48e-21!63;UBERON:0001049!6.58e-21!52;UBERON:0005068!6.58e-21!52;UBERON:0006241!6.58e-21!52;UBERON:0007135!6.58e-21!52;UBERON:0000955!8.47e-20!50;UBERON:0006238!8.47e-20!50;UBERON:0002616!4.37e-19!49;UBERON:0003056!1.17e-16!49;UBERON:0003080!5.07e-15!40;UBERON:0002780!2.25e-14!39;UBERON:0001890!2.25e-14!39;UBERON:0006240!2.25e-14!39;UBERON:0002020!4.92e-14!34;UBERON:0000153!1.78e-11!94;UBERON:0002791!6.39e-11!29;UBERON:0003528!6.39e-11!29;UBERON:0001893!6.39e-11!29;UBERON:0007811!8.91e-11!86;UBERON:0002619!3.60e-08!17;UBERON:0002021!1.61e-07!10;UBERON:0000411!1.61e-07!10;UBERON:0001950!1.61e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.85e-29,73;UBERON:0001016,8.26e-28,75;UBERON:0002346,1.26e-25,64;UBERON:0003075,1.26e-25,64;UBERON:0007284,1.26e-25,64;UBERON:0000073,5.61e-25,54;UBERON:0004121,4.14e-24,95;UBERON:0000924,4.14e-24,95;UBERON:0006601,4.14e-24,95;UBERON:0001049,4.46e-23,52;UBERON:0005068,4.46e-23,52;UBERON:0006241,4.46e-23,52;UBERON:0007135,4.46e-23,52;UBERON:0010371,3.39e-22,73;UBERON:0000955,4.50e-19,47;UBERON:0006238,4.50e-19,47;UBERON:0002616,2.98e-18,46;UBERON:0003056,3.76e-17,49;UBERON:0003080,1.94e-16,40;UBERON:0002020,7.49e-16,34;UBERON:0002780,1.15e-15,39;UBERON:0001890,1.15e-15,39;UBERON:0006240,1.15e-15,39;UBERON:0010314,9.11e-14,92;UBERON:0003528,4.25e-12,29;UBERON:0002791,4.25e-12,29;UBERON:0001893,4.25e-12,29;UBERON:0002021,6.86e-09,10;UBERON:0000411,6.86e-09,10;UBERON:0001950,6.86e-09,10;UBERON:0002619,1.85e-08,17;UBERON:0003076,2.46e-07,12;UBERON:0003057,2.46e-07,12;UBERON:0000956,4.45e-07,21;UBERON:0001869,4.45e-07,21;UBERON:0000203,4.45e-07,21;UBERON:0002420,7.45e-07,8;UBERON:0007245,7.45e-07,8;UBERON:0010009,7.45e-07,8;UBERON:0010011,7.45e-07,8;UBERON:0000454,7.45e-07,8 | |||
|phase1_expression=3.36312578920067,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,22.9616883407888,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,28.1219880594841,27.5075309221457,31.691570175309,0,0,0,0,0,0,0,0.103689612308478,0,0,39.4198358477249,38.2102575846291,5.75706756310284,2.97120960156533,3.67687514644008,128.835580769285,99.0853743541057,90.0134284881587,19.3872842963385,23.0548861878072,23.962015045611,57.7908807932859,25.3243174514256,38.1995619442025,90.450975740416,75.8841058659219,39.3302830691384,0.151452386666368,0.68014404096107,0,0,0,0,0,0,2.94933282276679,0,0,0,2.81686839553361,0,0,0,0,0,0,2.74041311325744,0,0,0.867426633830679,0.608930956624282,0.461230994512117,0.150722640552623,0.117588707135705,0,0.247194967734374,0.289198713839823,0,0.323533699894818,0,0,0,463.179220872268,386.429174070825,0,0,0,0,55.4225365797844,55.8150735438724,18.4711897605911,70.9203226384488,43.7273432034865,79.7906091108711,71.8728795390166,0.81471491080253,0,0,3.99839526184301,1.17108398666433,0.919608417733892,0.720248519221397,2.26057226753573,3.26575195926374,5.25266253167884,5.05989312622536,8.2785078636485,1.29340795759705,0.945530400839096,3.16712023495108,4.82230611340665,3.61461423993277,0.696504333044333,1.85203922767149,2.9855140022774,0,0,0,2.48550927042602,1.40715635988658,0.180062061461015,0.946978942340841,0.590292695242212,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0,0,0,0,0,0,13.0379768109759,4.6307075570678,0,0,3.62590025909898,1.85789337488351,1.03093969057675,0.201683524623343,0.22237804384487,0.380451252225118,0,0.658795818896044,0.251335208800269,0.397912944082302,0,1.79763881730844,0,0,2.65535061334314,1.71372768914593,1.1270773567308,0.407302655690628,0.387904974335251,0.140271639780637,0.379419222745544,0,0,0,0,0.333690211432188,0.589676985339609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27389694124582,1.14075483509418,0.678980343100753,1.17345124144251,0.167506257441816,0.238043640886014,0,0.157635144106191,0.44292937929755,0.318909537314974,0,0,0,0,0,0,0,62.6147300952389,50.9870836676084,0,0,5.67914794949262,8.98009111882268,8.18608911384636,0.477937595905104,1.11399337041197,1.13230612315533,11.7395103485719,10.2289550268959,10.6727700045561,62.6576567022524,0,1.6025904330053,0.651547837414304,0.329940245945071,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,5.221771726908,5.30370603509293,6.43011105094777,7.98031051390231,3.74574516964348,3.62007845324666,4.26250928760439,0,0,0.661585194164886,1.31909002353184,0.645857706783622,0.965006798850494,0.835606408021955,0.820704498725306,0.291480836629851,66.3822581197625,0,0,0,0,0,0,0,0,0,0,4.4287039101359,2.03319467126849,1.72808545314882,2.50905955217362,0.87345025498471,0.809186078308924,0.41326727862668,0,0,0.621339313086926,0,0,0.827292452285488,1.75006069509643,2.45403664607689,2.36538575687089,1.99507305697782,0.13020438484395,0,0.241584120826006,0,0.316011120628178,0.405450430580328,0.718976700153791,0,0,0,0,0,0.100966449948148,0.15241361331,0,0.0974578807397524,0,0.116876902181569,0.226730383615211,0,0,0,0.386379188064381,0,0,0,0,35.0146142422581,34.0640675015311,39.5297904273184,50.3529824267005,43.8452812653211,42.3020582538232,44.5514850152992,52.2372595740096,51.6582346241993,59.0246755397075,3.1136204275253,8.37952234142165,6.31714341290296,6.07766792670735,3.98265008993166,2.20612210140017,5.55616819504038,4.94484137373346,7.06022261101994,5.30664144703975,5.57654459758527,7.73367999682912,6.18033949301224,4.60981097315059,5.97328877138378,4.28664322154766,4.28772005995965,5.40145817298374,3.70877310722976,4.71036544430071,6.17164654293748,4.43689515398344,3.57654284920981,6.39524233182245,5.45834406408918,6.17686637609238,3.47563148458268,5.78753365163254,4.07412341537585,11.7839877048125,5.69448086996036,4.0386837773981,4.50154147486658,5.26785260032284,3.66522560864169,8.24374907195222,5.38042699424439,4.94203424311086,2.48674831689496,3.75005412503176,2.08681052058379 | |||
|short_description=p2@Nrxn3 | |||
}} |
Revision as of 23:36, 12 September 2013
Short description: | p2@Nrxn3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nrxn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_NM_001252074_5end |
EntrezGene: | Nrxn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 3.09e-14 | 33 |
neuronal stem cell | 3.09e-14 | 33 |
neuroblast | 3.09e-14 | 33 |
electrically signaling cell | 3.09e-14 | 33 |
CNS neuron (sensu Vertebrata) | 1.35e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.35e-11 | 23 |
electrically responsive cell | 2.48e-10 | 39 |
electrically active cell | 2.48e-10 | 39 |
ectodermal cell | 1.30e-08 | 44 |
neurectodermal cell | 1.30e-08 | 44 |
neural cell | 2.07e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.