FFCP PHASE1:Mm9::chr12:87301356..87301359,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=315|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:87301356..87301359,+|id=chr12:87301356..87301359,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,5.28e-16,3;CL:0000068,1.46e-15,3;CL:0002202,1.46e-15,3;CL:0000069,1.46e-15,3;CL:0002632,1.46e-15,3;CL:0002368,1.46e-15,3;CL:0000307,1.46e-15,3;CL:0000377,1.46e-15,3;CL:0002494,2.04e-15,3;CL:0000737,2.04e-15,3;CL:0000746,2.04e-15,3;CL:0000513,2.04e-15,3;CL:0002076,2.74e-12,15;CL:0000223,2.56e-09,20;CL:0000680,3.41e-08,6;CL:0000187,3.41e-08,6;CL:0000056,3.41e-08,6;CL:0002321,1.15e-07,70;CL:0000066,1.59e-07,25;CL:0000222,3.77e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.43e-07!23;UBERON:0001009!1.43e-07!23;UBERON:0003103!8.24e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.46e-15,3;UBERON:0001005,1.46e-15,3;UBERON:0007196,1.46e-15,3;UBERON:0001558,1.46e-15,3;UBERON:0000072,5.43e-07,27|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,3.34437266846731,0.85960031981627,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0,8.98285341900225,5.09610479413291,0,2.16491041011214,0.760079596425296,2.02209778005913,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.820837320395476,0.405344047729279,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.382576664137687,0.441182838239031,0.463735671240843|short_description=p@chr12:87301356..87301359,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=315 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:87301356..87301359,+ | |||
|id=chr12:87301356..87301359,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,5.28e-16,3;CL:0000068,1.46e-15,3;CL:0002202,1.46e-15,3;CL:0000069,1.46e-15,3;CL:0002632,1.46e-15,3;CL:0002368,1.46e-15,3;CL:0000307,1.46e-15,3;CL:0000377,1.46e-15,3;CL:0002494,2.04e-15,3;CL:0000737,2.04e-15,3;CL:0000746,2.04e-15,3;CL:0000513,2.04e-15,3;CL:0002076,2.74e-12,15;CL:0000223,2.56e-09,20;CL:0000680,3.41e-08,6;CL:0000187,3.41e-08,6;CL:0000056,3.41e-08,6;CL:0002321,1.15e-07,70;CL:0000066,1.59e-07,25;CL:0000222,3.77e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.43e-07!23;UBERON:0001009!1.43e-07!23;UBERON:0003103!8.24e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.46e-15,3;UBERON:0001005,1.46e-15,3;UBERON:0007196,1.46e-15,3;UBERON:0001558,1.46e-15,3;UBERON:0000072,5.43e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,3.34437266846731,0.85960031981627,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0,1.92109152660777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681721290312231,0.519572009205738,0,0,8.98285341900225,5.09610479413291,0,2.16491041011214,0.760079596425296,2.02209778005913,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.820837320395476,0.405344047729279,0,0.439100230582101,0.268412837520744,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.342745537829186,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0.201932899896295,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0.187682475451182,0.36630324853453,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.429742108096597,0.382576664137687,0.441182838239031,0.463735671240843 | |||
|short_description=p@chr12:87301356..87301359,+ | |||
}} |
Revision as of 23:31, 12 September 2013
Short description: | p@chr12:87301356..87301359, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:87301356..87301359, + |
Coexpression cluster: | MCL_coexpression_mm9:315 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 5.28e-16 | 3 |
duct epithelial cell | 1.46e-15 | 3 |
epithelial cell of tracheobronchial tree | 1.46e-15 | 3 |
branched duct epithelial cell | 1.46e-15 | 3 |
epithelial cell of lower respiratory tract | 1.46e-15 | 3 |
respiratory epithelial cell | 1.46e-15 | 3 |
tracheal epithelial cell | 1.46e-15 | 3 |
tracheoblast | 1.46e-15 | 3 |
cardiocyte | 2.04e-15 | 3 |
striated muscle cell | 2.04e-15 | 3 |
cardiac muscle cell | 2.04e-15 | 3 |
cardiac muscle myoblast | 2.04e-15 | 3 |
endo-epithelial cell | 2.74e-12 | 15 |
endodermal cell | 2.56e-09 | 20 |
muscle precursor cell | 3.41e-08 | 6 |
muscle cell | 3.41e-08 | 6 |
myoblast | 3.41e-08 | 6 |
embryonic cell | 1.15e-07 | 70 |
epithelial cell | 1.59e-07 | 25 |
mesodermal cell | 3.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.46e-15 | 3 |
respiratory airway | 1.46e-15 | 3 |
tracheobronchial tree | 1.46e-15 | 3 |
lower respiratory tract | 1.46e-15 | 3 |
segment of respiratory tract | 5.43e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.