FFCP PHASE1:Mm9::chr12:86630582..86630610,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=566|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:86630582..86630610,+|id=chr12:86630582..86630610,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000128,3.09e-08,6;CL:0000126,3.09e-08,6;CL:0000127,3.09e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004175,2.93e-14,9;UBERON:0005795,4.13e-12,4;UBERON:0000995,4.13e-12,4;UBERON:0003975,8.65e-10,5;UBERON:0000474,2.16e-09,9;UBERON:0001301,6.63e-08,3;UBERON:0006555,6.63e-08,3;UBERON:0005103,6.63e-08,3;UBERON:0000083,6.63e-08,3;UBERON:0009201,6.63e-08,3;UBERON:0004819,6.63e-08,3;UBERON:0006553,6.63e-08,3;UBERON:0003074,6.63e-08,3;UBERON:0003060,6.63e-08,3;UBERON:0003100,1.05e-07,11;UBERON:0004871,1.65e-07,3;UBERON:0005631,1.92e-07,3;UBERON:0000478,1.92e-07,3;UBERON:0000158,1.92e-07,3;UBERON:0005156,9.70e-07,26;UBERON:0000990,9.70e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.219686182734472,0,2.2397827460058,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,1.23597483867187,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.611036183101898,1.7416975885413,8.59257378674494,0.210441855886474,0,0.229902104433473,0,0.60281927134286,0.476255494059295,0.512454881139399,0.655912071918102,1.81092359517311,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0.793351699990633,0.213288250535234,0.232236671860439,0.77320476793256,0.201683524623343,0.889512175379481,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.442830443938806,0.627994911365499,0.863780147452604,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,2.47455184458803,0,0,0,0.188605079755898,0,0.614870295887855,1.29214146584111,0,0,0.632073515871632,0,0,1.36175842301515,0,0,0.428674070063185,0.177340233642274,0.891844088010353,1.15184314421485,0.304464949114599,1.64270195644597,0.42366414172764,0,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,0,0.341741761595705,0.412773735926445,1.11116716421827,0.753473828018764,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.436725127492355,0.809186078308924,0.495920734352016,0,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.387479470433193,0,0.117357238645754,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,7.50729901804728,1.64836461840539,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,1.11123363900808,0.618105171716683,0.320919209591815,0.252697211763798,0,0.377252682772152,0.655490552289177,0.448176066834085,0.34461281373368,0.476293691283074,0.231768651889711,1.15745532278223,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.470546902076653,0.507687647350059,0.548783918618318,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0.578719832943424,0,0.701794825336225,1.07435527024149,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p@chr12:86630582..86630610,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=566 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:86630582..86630610,+ | |||
|id=chr12:86630582..86630610,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.09e-08,6;CL:0000126,3.09e-08,6;CL:0000127,3.09e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004175,2.93e-14,9;UBERON:0005795,4.13e-12,4;UBERON:0000995,4.13e-12,4;UBERON:0003975,8.65e-10,5;UBERON:0000474,2.16e-09,9;UBERON:0001301,6.63e-08,3;UBERON:0006555,6.63e-08,3;UBERON:0005103,6.63e-08,3;UBERON:0000083,6.63e-08,3;UBERON:0009201,6.63e-08,3;UBERON:0004819,6.63e-08,3;UBERON:0006553,6.63e-08,3;UBERON:0003074,6.63e-08,3;UBERON:0003060,6.63e-08,3;UBERON:0003100,1.05e-07,11;UBERON:0004871,1.65e-07,3;UBERON:0005631,1.92e-07,3;UBERON:0000478,1.92e-07,3;UBERON:0000158,1.92e-07,3;UBERON:0005156,9.70e-07,26;UBERON:0000990,9.70e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0,0.219686182734472,0,2.2397827460058,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,1.23597483867187,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0.611036183101898,1.7416975885413,8.59257378674494,0.210441855886474,0,0.229902104433473,0,0.60281927134286,0.476255494059295,0.512454881139399,0.655912071918102,1.81092359517311,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0.536546802799238,0,0.16455984991348,0,0.0810688095458557,0,0,0,0,0.102904612379284,0,0.793351699990633,0.213288250535234,0.232236671860439,0.77320476793256,0.201683524623343,0.889512175379481,0.760902504450237,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0,0.216138049874694,0.398282546508734,0,0.114248512609729,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0.442830443938806,0.627994911365499,0.863780147452604,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.325773918707152,2.47455184458803,0,0,0,0.188605079755898,0,0.614870295887855,1.29214146584111,0,0,0.632073515871632,0,0,1.36175842301515,0,0,0.428674070063185,0.177340233642274,0.891844088010353,1.15184314421485,0.304464949114599,1.64270195644597,0.42366414172764,0,0.16488625294148,0.161464426695906,0,0,0,0.291480836629851,0,0.341741761595705,0.412773735926445,1.11116716421827,0.753473828018764,0.410082683163076,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.432021363287205,0,0.436725127492355,0.809186078308924,0.495920734352016,0,0.259229946583586,0.621339313086926,0,0,0,0.194451188344048,0.387479470433193,0,0.117357238645754,0.5208175393758,0.314578033277133,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,7.50729901804728,1.64836461840539,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.209613162627982,0.183843508450014,1.11123363900808,0.618105171716683,0.320919209591815,0.252697211763798,0,0.377252682772152,0.655490552289177,0.448176066834085,0.34461281373368,0.476293691283074,0.231768651889711,1.15745532278223,0.412085900803307,0.588795680537589,0.342869252385415,0.532427418478012,0.476872379894642,0.872078499793971,0.470546902076653,0.507687647350059,0.548783918618318,0.526139422875686,0.271608227691724,0,0.474540072496697,0.29551344712669,0.818462086339379,0.309873682371932,0.578719832943424,0,0.701794825336225,1.07435527024149,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr12:86630582..86630610,+ | |||
}} |
Revision as of 23:29, 12 September 2013
Short description: | p@chr12:86630582..86630610, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:86630582..86630610, + |
Coexpression cluster: | MCL_coexpression_mm9:566 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.09e-08 | 6 |
macroglial cell | 3.09e-08 | 6 |
astrocyte | 3.09e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
internal genitalia | 2.93e-14 | 9 |
embryonic uterus | 4.13e-12 | 4 |
uterus | 4.13e-12 | 4 |
internal female genitalia | 8.65e-10 | 5 |
female reproductive system | 2.16e-09 | 9 |
epididymis | 6.63e-08 | 3 |
excretory tube | 6.63e-08 | 3 |
mesonephric epithelium | 6.63e-08 | 3 |
mesonephric tubule | 6.63e-08 | 3 |
nephric duct | 6.63e-08 | 3 |
kidney epithelium | 6.63e-08 | 3 |
renal duct | 6.63e-08 | 3 |
mesonephric duct | 6.63e-08 | 3 |
pronephric duct | 6.63e-08 | 3 |
female organism | 1.05e-07 | 11 |
somatic layer of lateral plate mesoderm | 1.65e-07 | 3 |
extraembryonic membrane | 1.92e-07 | 3 |
extraembryonic structure | 1.92e-07 | 3 |
membranous layer | 1.92e-07 | 3 |
reproductive structure | 9.70e-07 | 26 |
reproductive system | 9.70e-07 | 26 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.